Caretta caretta (Loggerhead turtle): 125627167
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Entry
125627167 CDS
T09292
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125627167
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccay03310
]
125627167
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125627167
Nuclear receptors [BR:
ccay03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125627167
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125627167
NCBI-ProteinID:
XP_048686986
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Position
25:complement(11400599..11460746)
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AA seq
465 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQNGVSKDDSEALARV
YPTSVSSGVSDLDDISPLSDGLLFDFPLTPEGGSAYYNLDLLTSAQPSPDQSSVDVSDAK
LIKQESIYELMLEPGLFAHSTLEGSQLASDISMLEIDRIAQNVVKSHLETCQYTTEELKT
LAWMLYTQEEIRSLQNKSCETMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKYGGMQIFKSLGCDDLINAVFELGRNLCRLQLSD
EEIALFTAAVLLAPDRPWLTESKKVQKLQDKIYIALQHEIQKKHSSEDKLSKLISKLPLM
KTICNLHLDKLEFFRILHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaattgaagtgatcccatgtaagatctgcggagacaagtcttcagggatt
cactatggtgtcatcacctgcgaaggctgtaagggcttcttccggagaagccagcagaat
aacgccagctactcctgctcgcgccagaggaactgcctgatcgaccggaccaaccggaac
cggtgccaacattgccgcctacagaaatgtctggcactgggcatgtcgcgtgatgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcttgtatgccgaggtgcaaaagcac
cagcagagccaggagcagaacggcgtctccaaggacgactccgaggccctggcccgggtc
taccccaccagcgtgagcagcggggtctcggacctggacgacatctccccgctgtcggac
gggctcctcttcgacttccccctcacccccgagggaggcagcgcttactacaatcttgac
ctcctgacctcggcccagccctcgcccgaccagtccagcgtggacgtgagcgatgccaag
ctcatcaagcaggagtccatctacgagctgatgctggagcccggcctctttgcccacagc
accctggagggcagccagctcgcctcggacatttcgatgctcgagatcgaccgcatcgcc
cagaacgtagtcaagtcccacctggagacctgccagtacacgacggaggagctcaagacg
ctagcgtggatgctgtacacccaggaggagatcaggagcttgcagaacaagagctgcgag
accatgtggcagcagtgctccctgcagatctccaacgccattcagtacgtggtggagttc
gccaagcgcatcgacggcttcatggagctctgccagaacgaccagatcatcctcctcaaa
gcaggttgcctggaagtgcttctgatccgaatgattcgggcattcaaccctttaaataac
acggtgctcttcgaggggaaatacggtggcatgcagatattcaagtcgcttggctgcgac
gaccttatcaatgctgtctttgagctggggaggaacctgtgccggctacagctctcggac
gaggagattgcgctgttcactgcagccgtcctgctcgctccagatcgcccttggctcaca
gaatccaagaaggtgcagaagctccaggacaagatctacatagccctgcagcacgagatc
cagaagaaacactccagcgaggataagctctcgaagttgatttccaagctgcccttgatg
aaaaccatctgcaacctgcacttggacaagttggagtttttccggatcctgcatccggag
acagccatgaactttccgcccctgtacaaggaagtattcaactcggaactccagtacagc
gacccgcgagagagctaa
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