Caretta caretta (Loggerhead turtle): 125627223
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Entry
125627223 CDS
T09292
Symbol
ELAVL1
Name
(RefSeq) ELAV-like protein 1
KO
K13088
ELAV-like protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125627223 (ELAVL1)
03041 Spliceosome [BR:
ccay03041
]
125627223 (ELAVL1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125627223 (ELAVL1)
mRNA cycle factors
Stress granule specific factors
125627223 (ELAVL1)
Spliceosome [BR:
ccay03041
]
Common components
Common spliceosomal components
General mRNP proteins
125627223 (ELAVL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_3
BA_2335-like
E2
Motif
Other DBs
NCBI-GeneID:
125627223
NCBI-ProteinID:
XP_048687079
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All DBs
Position
25:complement(15024540..15116740)
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AA seq
326 aa
AA seq
DB search
MSNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS
LGYGFVNYVSAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQK
DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPIT
VKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNA
SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAM
AIASLNGYRLGDKILQVSFKTNKSHK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggttatgaagatcacatggctgaagattgcagggatgatattggtagaaca
aatttaatcgtgaactacctccctcaaaacatgacgcaggatgagttacggagtctattt
agcagtattggcgaagttgaatctgctaaacttattcgggacaaagttgcaggacacagc
ttaggctatggctttgtgaactatgtgagtgctaaagatgctgaaagagcaataaacaca
ctgaatggcctgagacttcagtcaaaaacaatcaaggtgtcgtacgctcgtccaagttct
gaagttatcaaagatgctaacttgtatattagtggactaccaaggacaatgacacaaaaa
gatgtagaagacatgttttcacgctttggccgcatcatcaactcacgtgtacttgtggat
caaactacaggtttgtccagaggggtcgcttttatccggtttgacaaaaggtcagaagca
gaagaggcaattacaagtttcaatggtcacaaacccccaggttcctctgaacccattact
gtgaagtttgcagccaatcctaaccagaacaaaaatgtggcactgttatcacagctgtat
cattcaccagctagacgatttggagggccagttcatcaccaggcgcaaagattcaggttc
tctcctatgggtgtagatcacatgagtgggctttctggtgtaaatgttccaggaaacgca
tcttctggctggtgtatcttcatctacaaccttggtcaagatgctgatgagggaatcctc
tggcagatgtttggcccctttggtgcggttaccaatgtgaaagttattcgagatttcaac
accaacaagtgcaaaggttttggttttgtgaccatgacaaactatgaagaagctgcaatg
gccatagcaagtcttaatggctaccgcctgggggacaaaatcttacaggtttccttcaaa
accaacaagtcccacaaataa
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