Caretta caretta (Loggerhead turtle): 125627324
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Entry
125627324 CDS
T09292
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
ccay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125627324 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
125627324 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125627324 (LSM7)
03041 Spliceosome [BR:
ccay03041
]
125627324 (LSM7)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125627324 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
125627324 (LSM7)
Spliceosome [BR:
ccay03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125627324 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
125627324
NCBI-ProteinID:
XP_048687286
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All DBs
Position
25:16311129..16331087
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaagaagaaagagagcatcttggatctctcaaaatacattgac
aaaacaattcgagtaaaattccaaggtggtagggaagctagcggagtcttgaaaggattt
gaccctcttctaaaccttgtgcttgatggcactattgaatatatgagagatccagatgac
caatacaaattaacagaggatacccgtcagctgggactggtggtttgcagaggaacatct
gtggttcttatttgtccacaagatggaatggaagctattccaaaccctttcattcagcag
caggagggctaa
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integrated database retrieval system
