Caretta caretta (Loggerhead turtle): 125627388
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Entry
125627388 CDS
T09292
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04136
Autophagy - other
ccay04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125627388 (ATG4D)
04136 Autophagy - other
125627388 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125627388 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125627388 (ATG4D)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125627388 (ATG4D)
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125627388 (ATG4D)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125627388 (ATG4D)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125627388 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
125627388
NCBI-ProteinID:
XP_048687418
LinkDB
All DBs
Position
26:complement(11928007..11938143)
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AA seq
490 aa
AA seq
DB search
MNSISPASVQYVSQDKLHHSDGRKLFNPRAGSQDGSCNGLFPGGAQSGQPSEPDEVDKIK
SKLLSAWNNVKYGWTVKTKTNFSKLSPIYLFGHVYCFEVEEDVERFQKDFASRIWLTYRR
EFQQLEGTVWTTDCGWGCMLRSGQMILAQGLLMHFLGRNWTWPDALFTTSLVEMDPMKPV
SPARPGSIGLQQLPTLAVDRGRDHWGIWAPLCPLSPQELEKERSHRTIVSWFADHPQAPF
GIHRLVELGRSSGKKAGDWYGPSIAAHIVRKAVEGCSEGSSLAVYVSQDCTVYKGDVVRL
VSGSDGRTVPDPGAKRKAVIILVPMRLGGETLNPVYVDCVKELLKLELCIGIIGGKPKHS
LYFVGYQDDFLLYLDPHYCQPFVDTTKKNFPLESFHCSSPRKMAFSKMDPSCTIGFYARD
GQELDTLCSVLTRVLNSSSAKEKYPMFTVTEGQAQEYGLAELCSRFSQQTVQLPKRSKAK
KPSSDEFVFL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatctcgcctgcctcggtgcagtacgtcagccaggacaagctgcaccattca
gatggcaggaagctctttaaccccagggccgggagccaggatgggagctgcaatgggctg
ttcccggggggggcgcagagcggccagcccagcgaacctgacgaggtggacaagatcaag
agcaagctcctctcagcctggaacaacgtgaaatacggatggacggtcaagactaaaacc
aacttcagcaagctgtcccccatatacctctttggccatgtctattgctttgaggtggag
gaggacgtggagcggttccagaaggactttgcctcccgcatctggctcacctaccgccgg
gagttccagcagctggagggcaccgtgtggaccacggactgcggctggggctgcatgctg
cgcagcgggcagatgattctcgcccagggactcctcatgcatttcctcggcaggaactgg
acctggcccgatgccttgttcaccaccagcctggtggagatggaccccatgaagcctgtc
tctcctgcccggcctggcagcattggcttgcagcagctgcctaccctcgccgtggacaga
ggcagggaccactggggcatctgggcccctctgtgcccccttagcccccaggagctggag
aaggagcgcagccaccgcacgatcgtctcatggttcgcagatcaccctcaggcacccttc
ggcatccaccggctggtagagctggggaggagctcagggaagaaagccggggactggtac
ggcccctccattgcggcccacattgtcaggaaagcggtcgaaggctgttcagaaggcagc
agcctggctgtctacgtatctcaggactgcacagtgtacaaaggggacgtggtgaggctg
gtgtcggggagcgacggccggaccgtgcctgatcctggcgccaagcggaaagctgtcatc
atcctggtgcccatgcgcctgggcggggagaccctcaatcctgtctacgtagactgtgtg
aaggagcttctgaagctggagctctgcatcgggatcatcggcgggaagcccaagcactcg
ctctacttcgtgggctaccaagatgacttcctgctgtacctggacccccactactgccag
ccctttgtggacaccaccaaaaagaacttccccctggagtcgttccactgcagctcaccc
cgcaaaatggccttcagcaaaatggatcccagttgcaccattggcttctacgcccgcgat
gggcaggagttggacacgctgtgctcggtgttgaccagggtactgaactcctcgtcggcc
aaggagaagtaccccatgttcacggtgacggagggtcaggcgcaggagtacgggctggcc
gagctgtgctcccgtttctcccagcagaccgtgcagctccccaagcgcagcaaggccaag
aagcccagctcggacgagttcgtcttcctgtga
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