Caretta caretta (Loggerhead turtle): 125627489
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Entry
125627489 CDS
T09292
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125627489 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125627489 (GTF2F1)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125627489 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125627489
NCBI-ProteinID:
XP_048687585
LinkDB
All DBs
Position
26:complement(11269307..11284204)
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AA seq
565 aa
AA seq
DB search
MRGERRTRRQPLRHWRGAEQRGRRRGREPGAGILSWKPGWTRSPISAKMTSLGTSSQSVT
EYVVRVPKNTPKKYNIMAFNAADKVNFTTWHQAKMERDLSNKKIYQEEEMPESGAGSEFN
RKLREEARRKKYGIVLREFKPEDQPWILKVNGKAGRKFKGVKKGGVTENASYYIFTQCPD
GAFEAFPVSNWYNFTPVAKHRTLTAEEAEEEWERRNKVLNHFTIMQQRRLKDQDDEEEEK
EKKTKKKSSELKIHDLEDDLEMSSDESELSDADGEKAAKPQKKTPLTKKKKKKKKGSDDE
AFEDSDDGDFEGQEVDYMSDGSSSSQEEATVGKPKVTKEEDGPKGIDEASESSEESEEEK
PAEEKEEEEEEKKAPTPQEKKKKKDSSDESETSEESDIDSEASSALFMAKRKTPPKKERK
GSASSSRGDSRPGTPPVDPGSTSSTLRAAASKLEQGKRQSGSGDLPAAKRLKLDSGPQTT
SGKSTPQPQSGKSTPSSGDVQLTEEAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNV
LAQILKRLNPERKMINDKMHFFLKE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgagcggcgcacgcgcaggcagccgctccgtcattggcgtggagcggagcag
cggggccggcggagagggcgcgagccgggggcggggatcctttcctggaagcccgggtgg
acgcgcagccctatctctgccaaaatgacctccctgggcacgagtagccagtcggttaca
gagtatgtggtgcgagtacccaaaaacacacccaagaagtacaacatcatggccttcaac
gctgccgacaaggtcaacttcaccacctggcaccaggcaaaaatggagcgagatctcagc
aacaagaagatctaccaggaagaggagatgccagagtcgggggctggcagcgagttcaac
cgcaagttgcgcgaggaggcgcgccgcaagaagtacggcattgtcctccgggagttcaag
cccgaggaccagccctggatcctcaaggtcaacggcaaagctgggcgcaagttcaaaggg
gtgaagaagggcggcgtgaccgagaacgcctcctactacatcttcacgcagtgccccgac
ggcgcctttgaggccttcccggtcagcaactggtacaacttcacccctgtggccaagcat
cgcaccctgacagccgaggaggcggaggaggagtgggagcggcggaacaaggtgctgaac
cacttcaccatcatgcagcagcggcggctgaaggaccaggatgacgaggaggaggagaag
gagaagaagaccaagaagaagagcagcgagctgaagatccacgacctggaggacgacctg
gagatgagctcagacgagagcgagctgagtgacgccgacggggagaaggcagccaagccc
cagaagaaaaccccgctgaccaaaaagaagaagaagaagaagaagggctcggatgatgag
gccttcgaggacagtgacgacggagactttgaggggcaggaagtagattacatgtcagac
gggtccagcagttcgcaggaggaggcaacagtggggaagcccaaggtgacgaaggaagag
gatggtcccaaagggatcgacgaggcgagcgagagcagcgaggagagcgaggaggagaag
cctgccgaggagaaggaggaggaggaagaagagaagaaggcccccacccctcaggagaag
aagaaaaaaaaggacagcagtgatgagtcggagacgtcagaggagagcgacatcgacagc
gaagcgtcctctgcactcttcatggcgaagaggaaaactccacccaagaaggagcggaag
gggtcggccagcagctcccggggggacagccgcccagggacgccccccgtggacccaggc
agcacatcctccacactgcgcgctgcagccagcaagctggagcaagggaagcggcagtcg
ggatccggtgacctcccagcggccaagaggctgaaattggactcgggaccccagacaacc
tcgggcaagtctactccccagccacagtcgggcaagtccacccccagcagtggagacgtg
cagctgacggaagaggccgtgcgccgctacctgacccgcaagcccatgaccaccaaggac
ctgctgaagaagttccagaccaagaagacggggctgagcagcgagcagacggtgaacgtg
ctagcccagatcctcaagcgcctcaaccccgagcgcaaaatgatcaacgacaagatgcac
ttcttcctgaaggagtga
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