Caretta caretta (Loggerhead turtle): 125627576
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Entry
125627576 CDS
T09292
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04137
Mitophagy - animal
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125627576
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125627576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125627576
03009 Ribosome biogenesis [BR:
ccay03009
]
125627576
04131 Membrane trafficking [BR:
ccay04131
]
125627576
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125627576
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125627576
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125627576
Membrane trafficking [BR:
ccay04131
]
SNARE
SNARE associated proteins
Others
125627576
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125627576
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125627576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
RNA_helicase
AAA_14
AAA_28
Vps4_C
NPHP3_N
nSTAND3
AAA_17
Mg_chelatase
Parvo_NS1
ATPase_2
ATPase
AAA_18
AAA_7
ABC_tran
IstB_IS21
DUF815
AAA_24
NB-ARC
ResIII
TsaE
NACHT
Viral_helicase1
SLFN-g3_helicase
nSTAND_NTPase5
Zot
Motif
Other DBs
NCBI-GeneID:
125627576
NCBI-ProteinID:
XP_048687766
LinkDB
All DBs
Position
26:8318667..8341088
Genome browser
AA seq
812 aa
AA seq
DB search
MPGPGGDSKGEDYSTAILRQKRRPNRLLVDEAVNEDNSIVSLSQTKMEELHLFRGDTVLL
KGKKRRETVCIVLTDDSCHSEKIRMNRVTRNNLRVRLGDVVSIQACPDVKYGKRIHVLPI
DDTIVGLTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPSPHCIVAPD
TVIHCEGEPIKREDEEESLNDVGYDDIGGCRKQMAQIKEMVELPLRHPGLFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLAEDVDLERVARDTHGHVGADLAALCSEAA
LQAIRKKMNIIDLEDDTIDADILDAMAVTMDDFQWALSQSNPSALRETVVEVPQVCWEDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDTSRAAILSA
NLRKSPVAGDVDLNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKMERERQSHPDA
VMEDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPAGKQS
RDGGADGAGGSREGDNSRGSLFQEEGDDDLYN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcccgggcggggactccaaaggggaggattactccacggccatcctgcgccag
aagcgtcggcccaaccggctccttgtggatgaggcggtgaatgaggacaacagcattgtt
agcctgtcacagaccaagatggaggagctgcacttgtttcggggtgacacggtgctgctg
aagggcaagaagcgccgggagacggtgtgcattgtcctcactgacgactcctgccacagc
gagaagatccgcatgaaccgcgtcacccgcaacaacctccgcgtgcgcttgggtgacgtg
gtgagcatccaggcctgcccagacgtgaagtacgggaagcggatccacgtgctgcccatt
gacgacaccatcgtcggcctgaccgggaacctcttcgaagtgtacctgaagccctacttt
ctggaggcctatcggcctgtgcacaaaggtgacatcttcttggtgcgcggcgggatgcgg
gccgtggagttcaaggtggtggaagtggatccgagcccccactgcatcgtggcccccgac
accgtcatccactgcgagggtgagcccatcaagagagaggacgaggaggagagcctgaat
gacgtgggctacgatgacatcgggggctgccggaagcagatggctcagatcaaggagatg
gtggagctgcccctgcgccacccagggctcttcaaagccattggcgtcaagccgccccga
ggcatcctgctgtacggcccccctggcaccgggaaaacgctggtggcccgagccgtggcc
aacgaaacgggagccttcttcttcctcatcaacggtccggagatcatgagcaagctggct
ggtgagtcagagagcaatttgcgcaaagcctttgaggaggccgagaagaatgcgccggcc
atcatcttcatcgacgagctggacgccattgcccccaagagggagaagacacatggcgag
gtagagcgcaggatcgtgtcccagctgctgacgctcatggatggcctcaagcagcggtcc
catgtcatcgtcatggccgccaccaaccggcccaacagcgtggaccccgccctgcgcagg
tttgggcgctttgaccgcgagatcgacatcgggatcccagactcggtcgggcggctggag
atcctgcagatccacaccaagaacatgaagctagctgaggacgtggatctggagcgggtg
gccagagacacgcacgggcacgtgggtgcggacctggcggccctgtgctccgaggcggcg
ctccaggccatccgcaagaagatgaacatcatcgacctggaggacgacaccatcgacgcc
gacatcctcgacgccatggccgtcaccatggacgacttccagtgggcgctcagccagagc
aacccgtcggcgctgcgggagacggtggtggaggtgccccaggtctgctgggaggacatt
ggggggctgcaggaggtgaagcgagagctgcaggagctggtgcagttcccggtggagtac
ccggacaagttcctgaagttcggcatgacgccatcacggggtgtgctgttctacgggccg
cccggctgcggcaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttc
gtctccatcaagggtcccgagctgctcaccatgtggttcggggagtctgaggccaacgtg
cgcgacgtcttcgacaaggctcgccaggccgccccctgcatcctgttcttcgacgagctg
gactccatcgccaaggcacgggggggcggcgcgggggacggcgggggggcggccgaccgt
gtcatcaaccagatcctcaccgagatggatggcatgaccaacaagaagaccgtcttcatc
atcggggccacgaacaggccagacatcatcgacccagccatcctgcgcccggggcggctg
gaccagctcatctacatcccgctgcctgacgacacctcccgggcggccatcctgagtgcc
aacctgcgcaagtcgcctgtggctggggatgtggacctgaactacctggccaagatcacc
cacgggttttcgggtgctgacctcactgagatctgccagcgcgcctgcaagctcgccatc
cgcgaggccatcgagatggagatcaagatggagcgggaacgccagagccacccggatgcc
gtcatggaggacgactacgacccggtgcccgagatccgtcgggatcattttgaggaggcc
atgcgcttcgcccgccgctccgtcagtgacaacgacatccgcaagtacgagatgttcgcc
cagacactgcagcagagccgcggcttcggcaacttcaggttcccagctgggaagcagagc
agggacgggggcgccgacggcgcaggtggctcccgggagggcgacaacagccggggcagc
ctcttccaggaggagggggacgacgacctctacaactga
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