Caretta caretta (Loggerhead turtle): 125627632
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Entry
125627632 CDS
T09292
Symbol
FARSA
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125627632 (FARSA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccay01007
]
125627632 (FARSA)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125627632 (FARSA)
Enzymes [BR:
ccay01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125627632 (FARSA)
Amino acid related enzymes [BR:
ccay01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125627632 (FARSA)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125627632 (FARSA)
Prokaryotic type
125627632 (FARSA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
Motif
Other DBs
NCBI-GeneID:
125627632
NCBI-ProteinID:
XP_048687888
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All DBs
Position
26:10061919..10072708
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AA seq
573 aa
AA seq
DB search
MASARSSIDSCHAQDDARVGPLLVCHTKNGGHRAAMRKIPYPRKXGVVFETTSGARGHPV
FSAPPPPAGMSPAMATDGPALAELLLQRLERAGGSGLGSLEAAAALGLEHQQLVGAVKSL
QALGEVIEAEQRSSKRWELTPEGKEIIQEGSHEARVFDSIPAEGLPQSKLMNLPSGKVGF
SKAMSNKWVRLDKNADGGPRIFRAVESVQDSVREKLQLVQQGEAESLEEKDRNELKKRKL
LTEVVIKTYWIRKGSAFSTTVTKQETDLTPEMIASGSWRDLKFKAYNFEALGIMPESGHL
HPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPAK
ATDFPMDYLKRVKKIHSQGGYGSQGYKYDWTLEEARKNILRTHTTAVSARMLYRLAQQEK
FTPAKYFSIDRVFRNETLDATHLAEFHQIEGVVADYGLTLGDLMGTLREFFTKLGISQLR
FKPAYNPYTEPSMEVFSYHQGLQKWVEVGNSGIFRPEMLLPMGLPEGVSVIAWGLSLERP
TMIKYGINNIRELVGHKVNLQMVYDGPLCRLDA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcccgctcgtcgatcgattcgtgccacgcccaagatgacgcccgcgttggg
ccgctcctcgtgtgccacacgaaaaatggcggccaccgggcggcaatgagaaaaattcca
tacccccggaagntgggggtggttttcgagaccacttccggggcgagaggtcacccggtg
ttttccgccccgccccctccggcaggcatgtcccccgccatggcgacggacgggcccgcg
ctggccgagctgctgctgcagcggctggagcgggcggggggcagcggcctgggcagtctg
gaggcggccgcggcgctgggcctggagcaccagcagctggtgggggcggtgaagagcctg
caggcgctgggggaggtcatcgaggctgaacagcgatcctctaaacgctgggagctgacg
cccgaggggaaggagatcatccaggagggaagccatgaggcgcgtgtctttgacagcatc
cctgctgaagggctgccccagagcaagctgatgaatctgccgagtgggaaagtggggttc
agcaaggccatgtccaacaagtgggtgcggctggacaagaacgcggatgggggtccgcgc
atcttccgggctgtggagagcgtgcaggactccgtgcgggagaagctgcagctggtgcag
cagggagaggctgagagcctggaggaaaaagacaggaacgaactgaagaaacggaaactc
ctgacggaagtggtcatcaagacctactggatccggaaaggcagcgccttctccaccacg
gtcaccaagcaggagacggacctcacgccagagatgatcgccagcggctcgtggcgtgac
ctgaagttcaaggcgtacaacttcgaggcgctggggatcatgcccgagagcgggcacctc
cacccgctgctcaaggtccgcacccagttcagacagatcttcctcgagatgggtttcaca
gaaatgcccaccaataacttcatcgagagctccttctggaacttcgacgccctcttccag
ccacagcagcacccggcccgcgatcagcacgacaccttcttcctgcaggatcctgccaaa
gccacggatttccccatggactatctgaagagagtgaagaagatccactcgcaaggaggc
tacggttcccaggggtacaaatacgactggacgctggaggaggcgcggaagaacatcctg
cggacgcacaccacggctgtcagcgcccgcatgctctaccggctggcccagcaggagaag
ttcaccccagccaagtatttctccattgaccgggtcttccggaacgagacgctggacgcc
acccacctggccgagttccaccagatcgagggggtggtggccgactacgggctgacgctg
ggggacctcatgggcaccctcagggagttcttcaccaagctggggatcagccagctgcgt
ttcaagccggcctacaacccctacacggagcccagcatggaggtgttcagctaccaccaa
gggctccagaagtgggtggaggtgggtaattcggggatcttccgcccagagatgctgctg
ccgatgggcctgccggagggcgtgtcggtcatcgcctggggcctctctctggagcgcccc
accatgatcaaatacggcatcaacaacatccgggagctggttgggcacaaggtgaacctg
cagatggtgtacgacggcccgctctgccgcctcgacgcgtag
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