Caretta caretta (Loggerhead turtle): 125627683
Help
Entry
125627683 CDS
T09292
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00310
Lysine degradation
ccay00514
Other types of O-glycan biosynthesis
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125627683 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125627683 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccay01003
]
125627683 (COLGALT1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
125627683 (COLGALT1)
Glycosyltransferases [BR:
ccay01003
]
O-Glycan biosynthesis
O-linked Gal type
125627683 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
Motif
Other DBs
NCBI-GeneID:
125627683
NCBI-ProteinID:
XP_048688015
LinkDB
All DBs
Position
26:13278523..13302242
Genome browser
AA seq
608 aa
AA seq
DB search
MAPAAGLWRRLLLLLLAAPGGAYFPEERWSPESPLQAPRVLIALLARNAAHALPPALGAL
ERLRHPKERTALWVATDHNTDNTTAVLREWLINVQTLYHYVEWRPMEEPRSYLDEEGLKH
WSNSRYEHVMKLRQAALKSARDMWADYILFVDADNLLTNPDTLGLLMAENKTVVAPMLDS
RAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKEASQDLAFYP
PHRDYTWSFDDIIVFAFACKQAEVQMFVCNKEVYGFLPVPLRAHSTMRDEVESFMHVQLE
IMVKNPPVEPSQYLSVLPKVPDKMSFDEVFMINLKRRADRRERMLRTLYEQQIDCKIIEA
VDGKAMNSSEVEAMGIQMLPGYKDPYHGRPLTKGELGCFLSHYKIWKEIVERGLEKSVVF
EDDLRFEIFFKRRLMNLMYDLEEEGLDWDLIYIGRKRMQVEHPEKSVPHVRNLVEADYSY
WTLAYVISLQGAQKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYMEHFENRNLLAFSVEPL
LVYPTHYTGDDGYISDTETSVVWNNERVKTDWDRAKSQKMKEQQELSKEAKNSDVLQSPL
DSTARDEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccgccgggctctggcggcggctgctgctgctgctgctggcggccccgggc
ggcgcctacttccccgaggagcggtggagcccggagtcgccgctgcaggcgccccgggtg
ctgatcgcgctgctcgcccggaacgcggcgcacgcgctgccgccggcgctgggggccctg
gagcggctgcggcacccgaaggagcgaacggcgctgtgggtggcaacagaccacaacact
gacaacacaacggctgtgctacgagaatggctgataaatgttcagaccttgtatcactat
gtggagtggaggccgatggaggagcccaggtcctatctggatgaggaaggcctgaagcac
tggtcaaattctcgctatgagcacgtgatgaagctcagacaagcagccttgaaatctgcc
agggacatgtgggctgactacatcttgtttgtggatgcagataatctcctgacaaaccca
gacaccctgggcctgctgatggcagagaacaagactgtagtggcacccatgttggactct
cgtgctgcctattctaacttctggtgtggaatgacctcgcagggttattacaaacgcact
cctgcctacattcccattcgaaaacgagatcgccgtggctgctttgctgtccccatggtg
cactccactttcctgattgacctgcggaaagaggcctcccaggaccttgccttctaccca
ccacaccgagattacacttggtcttttgatgacatcattgtgtttgcatttgcctgcaag
caggcagaggtccagatgtttgtatgcaacaaagaggtttatggcttcctgccggtgcca
ctgagagcccacagcaccatgcgggatgaggtggaaagcttcatgcacgtgcagctggag
attatggtgaagaaccctccggtggaaccttcacaatacctgtccgtcctgcccaaggtc
cctgacaagatgagctttgatgaggttttcatgattaacttaaagcgcagggcagatcga
cgagagcgaatgctgcggacgctgtacgagcagcagatcgactgcaaaatcattgaggct
gtggatggaaaagccatgaacagcagtgaggtggaagccatggggattcagatgctgcca
ggatataaggatccataccacggccgtccactcaccaaaggggagctgggctgcttcctc
agtcactacaagatctggaaggagattgtggagagagggctggagaaatcagtcgtgttt
gaggatgacctgcggtttgaaatattctttaaacgacggctaatgaatctgatgtatgac
ctcgaagaagagggtctggactgggacttgatttacattgggaggaagcgaatgcaggtg
gagcatccagagaagtctgtgcctcacgtgcggaacctggtggaggcagattattcctac
tggactctagcctatgtgatttcactgcagggtgcccagaagctgctggcggctgagcca
ctctccaagatgttaccggtggatgaatttcttcctgtcatgtttgacaaacaccctgtc
tctgaatacatggaacattttgaaaaccggaatttgctggccttttcagtggaaccactg
ctggtttacccaacacattacactggtgatgatggctacatcagcgacactgagacctct
gtggtttggaataatgagagagtaaaaactgactgggaccgtgccaaatcccagaaaatg
aaagaacagcaggagctcagcaaggaggccaagaactcagatgtgctccaatcacctctt
gacagtacagcccgggatgagctatga
DBGET
integrated database retrieval system
