Caretta caretta (Loggerhead turtle): 125627974
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Entry
125627974 CDS
T09292
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125627974 (TSEN34)
Enzymes [BR:
ccay01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125627974 (TSEN34)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125627974 (TSEN34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
125627974
NCBI-ProteinID:
XP_048688594
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All DBs
Position
27:complement(4373250..4376319)
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AA seq
284 aa
AA seq
DB search
MIRIHVLEGVALVWSVEDAREIRERFRLVGTLVGALARKPRQNTRLGLPLQLLPEEARLL
AELGAAVLVRGTEIQPPAEGEEPTQASEVEAYQQELEESYQEQQRLAGAERGALLARLAE
RIAQGRARRREQRGETPDTAEDSGLLDSPFVLPRGSMMVQLPTARRHPGRVERVDWTSPS
PDWPHAGCPAHEARYRVFRELWGRGYYLSGGSKFGGDFLVYPGDPLRFHAHYIALCCPQG
APLPLRTLVAAARLGTGVKKTLLLCSPGPSGALAFTSLQWSGLQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatccacgtgctggagggggtggctctcgtgtggagcgtggaggacgccagg
gagatccgtgagcggttccggctggtggggaccctggtgggggcgctggcccgcaagccc
cggcagaacacccgcctgggcctccccctgcagctgctccccgaggaggcccggctgctt
gccgagctgggcgcagccgtcctggtgaggggcaccgagatccagcccccggcggagggg
gaggaaccgacccaggcgtccgaggtggaggcctaccagcaggagctggaggagagctac
caggagcagcagcgcctggctggggcagagaggggggccctgctggcccggctggctgag
cgcatcgcccagggccgagcccgtcgcagagagcagcgcggggagacgccagacactgcg
gaggattcggggctcctggattcgcccttcgtcctgccccggggctccatgatggtccag
ctgcccacggcccggcggcacccggggcgggtcgagcgggtggactggacctccccctcc
ccggactggcctcacgccggctgcccggcccacgaggcccggtaccgcgtcttccgcgag
ctgtggggcaggggctactacctgtccggagggagcaagtttgggggagacttccttgtg
tacccaggcgaccccctgcggttccatgcccactacatcgcgctgtgctgcccccagggg
gcccccctcccgctccgcaccctggtggcagccgcccgcctgggcaccggcgtcaagaag
accctgctgctctgctcgccaggcccgagcggcgccctcgccttcacctctctgcagtgg
agcgggctgcagtga
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