Caretta caretta (Loggerhead turtle): 125628092
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Entry
125628092 CDS
T09292
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125628092 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125628092 (SNRPA)
Spliceosome [BR:
ccay03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
125628092 (SNRPA)
Complex B
125628092 (SNRPA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
Motif
Other DBs
NCBI-GeneID:
125628092
NCBI-ProteinID:
XP_048688800
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All DBs
Position
27:complement(11048610..11052238)
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AA seq
281 aa
AA seq
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MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EISSATNALRSMQGFPFYDKPMRIQYAKSDSDIISKMKGTYVERDRKREKRKPKGPETPV
VKKQMPGAAAPVAGAVQGAVPGMPPMNQAPRMMHHMAGQPPYMPPPGMIPPPGMTPGGIA
PGAMPPQQMMPGQMPPTQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNEVQAGAARDALQGFKITQSNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcccggaaacccgccccaatcacaccatctacatcaacaacctcaatgagaag
atcaagaaggatgagctgaagaaatccctctacgccatcttctcccagttcggccagatc
ctggatatcctggtgtctcggagcctcaagatgcggggtcaagccttcgtcatcttcaag
gaaatcagcagcgccaccaacgccttgaggtccatgcaggggttccccttctacgacaag
ccgatgaggatccagtacgccaagtcggactccgacatcatctcgaaaatgaaaggcacc
tacgtggagcgcgaccgcaagcgggagaagaggaagcctaaaggcccggagacgcccgtg
gtcaagaaacaaatgcctggggccgctgctccggtggcaggcgcagtgcaaggagccgtc
cctgggatgccgccaatgaaccaggcccctcgcatgatgcaccacatggcaggccagcct
ccatacatgccccctccgggtatgatccccccacccggtatgactccaggaggaatcgcg
ccaggggccatgccccctcagcagatgatgcctggccagatgccgcctacccagccgctc
tctgagaacccacccaatcacatcctcttcctcaccaacctgcccgaggagaccaacgag
ctgatgctgtccatgctcttcaatcagttcccggggttcaaggaggtgcgcctggtgccc
gggcggcacgacatcgctttcgtggagtttgataacgaggtgcaggccggagccgcccgc
gacgccctccagggcttcaagatcacacagagcaacgccatgaagatttcctttgccaag
aagtga
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