Caretta caretta (Loggerhead turtle): 125628100
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Entry
125628100 CDS
T09292
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04517
IgSF CAM signaling
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125628100 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125628100 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125628100 (SPTBN4)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125628100 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
125628100 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
PH_11
SOS1_NGEF_PH
PH_17
Motif
Other DBs
NCBI-GeneID:
125628100
NCBI-ProteinID:
XP_048688824
LinkDB
All DBs
Position
27
Genome browser
AA seq
2499 aa
AA seq
DB search
MASGAAELDNMEIQSQNSNTRWENTDNQVWDDTTVTAKLFECSRIKALADEREAVQKKTF
TKWVNSHLAHVSCRISDLYADLRDGYMLTKLLEVLSGEQLPKPTRGRMRIHSLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALL
LWCQMKTSGYPEVNIQNFTTSWRDGLAFNALIHRHRPEIVDFSKLTKSNATYNLQQAFNV
AEQQLGLTKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAVEL
EALMERYERLAAELLAWIERTVAIISNQKFANSLAGVQHQLQTFTTFCTLEKPVKFQEKG
NLEVLLFSIQSKLRGLSRKLYVPGEGRGISDINKAWAQLEKVEHEREVSLHKELIRQEKL
ELLAQRFDHKAGMREAWLSENQRLVAQDNFGYDLPAAEAAMKKHEAIEADVSSYEERIQV
VAELAMALEAEGYYDVRRISAQKGSILRQWGLLTELVGARRARLEQSLALQTIFQDMVSM
IGWMEEMQAPLLSREVGKHLLEVEDLLQKHGLLEADVAAQSERVQALNQAALKFCELEGY
QPCDPQIIRNRVTHVQTCLEELRQQAAQRRTELEASRHLWAFFQELEEAEAWVREKEQIL
ASKPCGRDLSSVLQLSGQHKLMLGELGGRRALLHQAVEKGEQLLATQRPGTAQLEEKLRE
VQQGWKRLEEVTGTHQQKLQEALSFYRFSAETDDLLAWLRDSYRLASSDDFGHDECSSRA
LLRKQAAAAQELERHRAPVLALRAQLARLAAPPRQLLGAQIRVVEVEQLYGEVAEVAVLR
HQWLQDALAVHCMFGEVRACEGWLDEKEQWLSGMHAPQELEDVEVVKHRFESLDQEMSSV
MGRILDVNETVQQLVEGGHPSASEVQSCRDHLNSRWNRVVELVEQRKDHLSSVLRIQNYL
LECTEIKAQIREKRRAVEASQCSSGDLGGVLALQRKLSTMEAALVVLEPKLLELQQEGEA
LATSHPAHALAVLLHFEEISEEWEALKSTLQGCEDSLSVARRLQQFIQDLDNFLTWLVKT
QAAVASEELPSNLAGAERLLSQHVALKEEIDRYEEDYTTIQEASDLLALEEADVPCLSLQ
HWLQKLDVGWNKLLQMWESRRVALVQAHVFHLFLRDVQQAEACLYNQESTLAHAELPTTV
EAVEKAIKKHKDFVTTMELSMPRTTLALQAGESLVRQGSPYSERAQEEMAELRAKSHRNF
QLAQARTQQLTDHLGLQRFLQSCHELAGWMKEKRPMAGDPAAKPHQRWLRHRALLAELAQ
NREWLEQIEQEGRQLLEEKPELAGSVRKQLEEIRQCWAELESTSQARAQQLFEASKAEQL
VQSYADLDKRLVNMEGQLQAVDAGASLATVNNQLKKLQTMESQMEEWYKEAGQLQAQLAS
LPLEPASKEAVDEKQNAVGTRIVRLIEPLKERRRILLASKEVHQVCRDLEDEISWVQDRL
PLASLRDPGSSLQAVQQFIKKNQNLRRELQTHQAQVDEVLARAGALASLRSPEVDGVRRL
LERLRELWGALREQTEQRQQLLDATYQAEQYHFDAGQVEAWLSEQELLLMNEEKGKDEQS
TLQLLKKHLLLEQTIENYEETVAQLSRQCRALLELGHPASEQISRRQSRADRLYVSLKGL
AEERKARLEQHYWLCQLGREVDDLEHWIAEKEVVAGSPELGQDLEHVTLLQEKFTEFASE
TGSVGNERLSAVNQMVDELIDYGHVDAATIAEWKDGLNEAWADLLELMETRAQMLAASHE
LHKFFSHCKDLLAQIEEKQQRLPEVAARESRSSAGALQGVLSTFEHDVQVLVSQVRQLQE
GAAQLRTVYAGENADAIVTKEQDVMRAWKELLSSCEACRLQITTTTEKMRFTSMVRDLIS
WMEGIICQIGTREKPRDVSSVEVLMNYHQGLKSEIDARSQTIAACVELGRTLVLNRSPTA
EEIKGQLEKLLAKKEELTEKWDKHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLKSHDL
GSSVDEVEQLIRRHEAFRKAASSWEERFSSLRRLTTLEKLKAEQSKQPATPLLGRKFLGE
SSEPGPKGPPLLRQAEAKLERQDLLRGRPQAPALPSGGPGEPAEALEFKVAYVRQEMKPE
QLQVEGLATSAERLREAKAAAEERLEAKPSQHLQVPVAGAVLAEPGQVSRAEMQPEPSEQ
ETPRHEQPERRRERRERRLERQESSEQETPRHEPKGGGKTTLADIVEQLQEKESTAQVPA
PPHDSPTHLPNSLDLLPERTPRPDRPRARDRPKPRRRPRPRDPSQPPGESRRSRSAPAQS
SAPPPPPPTHTVHLEGFLFRKHELEGPNKKASNRSWVNLYCVLSRGDLGFYKDAKGQASG
STHGGEPPVPLHQAASQVASDYKKKKNVFKLKTGDGNEFLLQAKDEEEMKNWLQALAAST
EEHAEIARWSQALLTTSSTDEGNPRRESDRRASASGRKK
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagcagctgagctggataacatggagatccagtcgcagaacagcaacacc
cgctgggagaacacggacaaccaggtctgggatgacaccacggtcaccgccaagctgttt
gagtgttcccgcatcaaagcactcgccgatgagcgcgaggccgtgcagaagaaaaccttc
accaagtgggtgaactcgcacctggcccacgtgtcctgccgcatcagcgacctctacgcc
gacctccgcgacggctacatgctgaccaagctgctggaggtgctgtccggggagcagctg
cccaagccgacacgcgggcgcatgcggatccactcgctggagaacgtggacaaggccctg
cagttcctgaaggagcagcgcgtgcacctggagaacgtcggctcgcacgacatcgtggac
gggaaccaccgcctgacgctggggctcgtctggaccatcatcctgcggttccagatccag
gtgattaaaatcgagacggaagacaacagggagacccgctcggccaaggacgcgctgctg
ctctggtgccagatgaagacgtcagggtacccggaagtgaatatccagaacttcaccacc
agctggagggacgggctggccttcaacgccctgatccaccggcacaggccggagatcgtc
gacttcagcaaactcaccaaatccaacgctacttacaacctgcagcaggccttcaacgtg
gccgagcagcagctgggcctgaccaagctgctggacccggaagatgtgaacatggagaac
ccggacgagaagtccatcatcacctacgtggtctctttctaccactacttctccaaaatg
aaggccctcgcagtggaggggaagaggattgggaaggtgctggaccaggcggtggagctc
gaggcgctcatggagcggtacgagcggctggcggccgagctgctggcatggatcgagcgc
accgtcgccatcatcagcaaccagaagttcgccaactccctggccggggtgcagcaccag
ctccagaccttcaccaccttctgcaccctggagaagccggtcaagttccaggagaagggg
aacctggaggtcctgctcttcagcatccagagcaaactgcgtggcctcagccgcaaactc
tacgtgcccggcgagggccgcggcatctcggacatcaacaaggcctgggcccagctggag
aaggtggagcacgagcgggaggtgtcgctgcacaaagagctcatccggcaggagaagctg
gagctgctggcccagcgcttcgaccacaaggccggcatgcgggaggcctggctcagcgag
aaccagcggctggtggcgcaggacaactttggctacgacctgccggcggcggaggcggcc
atgaagaagcatgaggccattgaggcggacgtctcgtcctatgaggagcgcatccaggtg
gtggcggagctggcgatggccctggaggccgagggctactacgatgtgcggcgcatcagc
gcccagaagggcagcatcctgcgccagtgggggctgctgaccgagctggtgggtgcccgg
cgggcccgcctggagcagagcctggctctgcagaccatcttccaggacatggtttccatg
atcggctggatggaggagatgcaggccccgctgctgtcgagggaggtggggaagcacctg
ctggaggtggaggacctgctgcagaagcacggcctgctggaggccgacgtggcggcccag
agcgagcgggtgcaggctctcaaccaggccgccctgaagttctgcgagctggagggttac
cagccctgcgacccccagatcatccgtaaccgcgtgacccacgtgcagacgtgcctggag
gagctgcgccagcaggcggcccagcggcgcacggagctggaggcctcccgccacctgtgg
gccttcttccaggagctggaggaggcggaggcctgggtgcgggagaaggagcagatcctg
gcctccaagccgtgcggcagggacctgagcagcgtcctgcagctgagcgggcagcacaag
ctgatgctgggggagctgggtgggcgccgggccctgctgcaccaggccgtggagaagggg
gagcagctgctggccacccagcgccccggcacggcccagctggaggagaagctgcgggag
gtgcagcagggctggaagaggctggaggaggtgacggggacgcaccagcagaagctgcag
gaggccttgagcttctaccggttcagcgcggagacggacgacctgctggcctggctgcgg
gacagctaccgcctggcctccagcgacgacttcgggcacgacgagtgctccagccgggcg
ctgctccgcaagcaggcggccgcggcccaggagctggagcggcaccgggcgcccgtcctg
gccctgcgcgcccagctggcccgcctggccgccccgccccgccagctgctgggcgcgcag
atccgcgtcgtggaggtggagcagctctacggggaggtggccgaggtggccgtgctgcgg
caccagtggctgcaggacgccctggccgtgcactgcatgttcggcgaggtccgcgcctgc
gagggctggctggacgagaaggagcaatggctctccggcatgcacgcgccccaggagctg
gaggacgtggaagtggtgaagcacaggtttgagagcctggaccaggagatgagcagcgtg
atggggcgcatcctggacgtgaacgagacggtgcagcagctggtggagggcggccacccc
agcgcgtccgaggtgcagtcctgtcgggaccacctgaacagcaggtggaaccgggtggtg
gagctggtggagcagaggaaggaccatctcagctccgtcctgaggatccagaactacctg
ctggagtgcaccgagatcaaggcgcagatccgggagaagcgccgcgccgtggaggccagc
cagtgcagctccggcgacctgggtggcgtcctggccttgcagcgcaagctctccaccatg
gaggctgccctggtggtgctggaacccaagctcctcgagctgcagcaggagggggaagcc
ttggccacctcccacccggcccatgcgctggccgtcctgctgcacttcgaggagatcagt
gaggagtgggaggccttgaagagcaccctgcagggctgcgaggactcgctctccgtggcc
cgccggctgcagcagttcatccaggacctggacaacttcctgacctggctggtgaagact
caggcagctgtggcctcggaagaacttcccagcaacctggcgggggcggagcggctgctg
agccagcacgtggccctcaaggaggagattgaccgctacgaggaggactacaccacgatc
caggaggccagcgacctgctggccctggaagaggccgacgtcccctgcctctcgctccag
cactggctgcagaagctggacgtgggctggaacaagctgctgcagatgtgggagagccgg
cgggtggcgctggtccaggcccacgtcttccacctgttcctgagggacgtgcagcaggcc
gaggcgtgtctgtacaaccaggagtccaccctggcccacgcggagctccccaccacggtg
gaggcggtggagaaggccatcaagaagcacaaggatttcgtaaccaccatggagctgagc
atgccgaggacgacgctggccctgcaggccggggagagcctggtgcgccagggcagcccc
tacagcgagcgcgcccaggaggagatggcagagctcagagccaagagccaccggaacttc
cagctggcccaggcgcggacgcagcagctgaccgaccacttgggcctgcagcgtttcctg
cagagctgtcacgagctggccggctggatgaaggagaagcggcccatggccggggacccg
gcggccaagccccaccagcgctggctgcggcaccgggcgctcctggccgagctggcgcag
aaccgcgagtggctggagcagatcgagcaggaaggccggcagctccttgaggagaagccg
gagctggccggctcggtgaggaagcagctggaagagatccggcagtgctgggcagagctc
gagagcacgtcgcaggccagggcccagcagctcttcgaggccagcaaggcggagcagctg
gtgcagagctatgcggacctggacaagaggctggtgaacatggaggggcagctgcaggct
gtggatgctggtgccagcctggccaccgtcaacaaccagctgaagaaactccagacgatg
gagtcgcagatggaggagtggtacaaagaggccgggcagctccaggcgcagctggcctcc
ctgcccctggagccggccagcaaggaggcggtggacgagaagcagaacgcggtggggaca
cggattgtccgcctcatcgagcccctgaaagagaggaggaggatcctgctggcttccaag
gaggtgcatcaggtctgccgcgacctggaggacgagatcagctgggtccaggaccggctg
ccactcgcctccttgagagatcccgggagcagtctgcaggccgtgcagcagttcatcaag
aagaaccagaacctgcggcgggagctgcagacgcaccaggcccaggtggacgaggtgctg
gcccgggcgggcgccctcgcctccctcaggagccccgaggtggacggggtgcgacggctg
ctggagaggctgcgggagctgtggggggcgctgcgggagcagacggagcagcgccagcag
ctgctggacgccacctaccaggcggagcagtaccacttcgacgccggccaggtggaggcc
tggctcagcgagcaggagctgctgctcatgaacgaggagaagggcaaggacgagcagagc
accctgcagctgctgaagaaacacctgctgctggagcagacgattgagaactacgaggag
acggtcgcccagctctcccgccagtgccgcgccctgctggagctgggccaccccgccagc
gaacagataagtaggcggcagtctcgggctgaccggctctacgtgtctctgaagggcctg
gcggaggagcgcaaggccaggctggagcagcattactggctctgccagctcggccgcgag
gtggacgacctggagcactggatcgccgagaaggaggtggtggccgggtcaccggagctg
ggccaggacttggagcacgtcacgctgctgcaggagaagttcacggagttcgccagcgag
acgggcagcgtggggaacgagcggctctcggccgtgaaccagatggtggacgagctgatc
gactacgggcacgtggacgcggccaccatcgcggagtggaaggacgggctgaacgaggcc
tgggccgacctgctggagctgatggagacgcgggcccagatgctggctgcctcccacgag
ctgcacaagttcttcagccactgcaaggacctgctggcccagatcgaggagaagcagcag
cggctgccggaggtggcggcccgcgagtcccgcagctccgccggggccctgcagggggtg
ctcagcaccttcgagcacgacgtgcaggtgctggtgagccaggtgcggcagctgcaggag
ggggcggcccagctgcggacggtgtacgccggggagaacgctgatgccatcgtcaccaag
gagcaggatgtgatgcgggcgtggaaggagctgctgagctcatgcgaggcgtgccggctg
cagatcaccaccaccacggagaagatgcgcttcaccagcatggtgcgcgacctcatctcc
tggatggaaggcatcatctgccagatcggcacccgtgagaagcccagggacgtgtcctcg
gtggaggtgctgatgaactaccaccagggcctgaagagcgagatcgacgcccggagccag
accatcgcggcctgcgtggagctgggcaggaccctggtgctcaacagaagccccacagcc
gaggagatcaagggccagctggagaagctgctggccaagaaggaggagctgactgagaag
tgggacaagcactgggagtggctgcagcagatgctggaagtgcaccagtttgcgcaggag
gccgtggtggccgacgcctggctcacggcccaggagcccctgctgaagagccacgacctg
ggcagcagcgtggacgaggtggagcagctgatccggcgccacgaggcctttcgcaaggcg
gcctcctcctgggaggagagattcagctccctgcggcgcctcaccacgctagagaagctg
aaagccgagcagagcaagcagccggccacgccactcctgggccgcaagttcttgggggag
tccagcgagccgggccccaagggccccccgctgctgcgccaggccgaggcaaagctggag
cgtcaggacctgctgcggggccggccccaggctccggccctgcccagcgggggcccgggc
gagccggccgaggcgctggagttcaaggtggcctacgtgcggcaggagatgaagccggag
cagctgcaggtggagggcctggccaccagcgccgagaggctgagggaggccaaggcggcc
gctgaggagaggctggaggccaagccgagccagcacctgcaggtgcccgtggcgggcgcg
gtgctggcagagccgggccaggtcagccgggctgagatgcagccggagcccagcgagcag
gagacgccccggcacgagcagccggagaggcgccgggagcgccgggagcgccggctggag
cggcaggagtccagcgagcaggagacgccccggcacgagcccaaagggggcggcaaaacc
acgctggcggatattgtggagcagctgcaggagaaggagtcgactgcccaggtgccagcc
ccgccccacgactcccccacccacctgcccaacagccttgacctgctgcccgagaggacg
ccacgcccggaccggccgcgggcccgcgacaggcccaagcccaggaggaggccgcggccc
agggaccccagccagcccccgggggagagccgcaggtcccgctcggcaccggcccagagc
agcgccccgccccccccaccccccacccacaccgtccatctggaaggcttcctcttccgc
aagcacgagctggaggggcccaacaagaaggcctccaacaggtcctgggtaaacctttac
tgtgtcctgagcagaggggacctgggcttctataaggacgccaaggggcaggcgtcgggc
agcacccacggcggggagccgccggtccccctgcaccaggccgccagccaggtggccagc
gactacaagaagaagaagaatgtcttcaagctcaagactggcgatgggaacgagttcctg
ctgcaggccaaggacgaggaggagatgaagaactggctccaggcgctggctgcgtctaca
gaggagcacgccgagatcgcccgctggagccaggcgctgctcaccacctcctccaccgac
gagggcaacccccggcgggagagcgaccggcgggccagcgcgtccggcaggaagaagtga
DBGET
integrated database retrieval system
