Caretta caretta (Loggerhead turtle): 125628102
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Entry
125628102 CDS
T09292
Symbol
LTBP4
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125628102 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125628102 (LTBP4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
EGF
FXa_inhibition
EGF_3
EGF_2
EGF_Teneurin
EGF_PEAR1L
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
125628102
NCBI-ProteinID:
XP_048688827
LinkDB
All DBs
Position
27:11555472..11591840
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AA seq
1638 aa
AA seq
DB search
MQPPALAALTLLASLQLLEVRGEGTAGSQVLSPAPRDQPPRPGRPVPAGPQPPRLEKRSR
TLARRGQRAPKAASPHVCGVTCCPGWSLAPKTQKCTKAICTPKCRNGGLCQEPQVCTCRP
GFAGRRCEQLVPPEPPLGLPPGPSPRPTSASAPRPTAPNARRAASVHWQPLTLAELQAVL
RRRAAGPTDKMASVLAKHLEAQRGRAARPAPPPSTRPPKSGQTLHRSPRPVLCPLLCQNG
GVCIKKDQCLCPPSFTGKFCQIPAPRPQPPAPAQKEDSPGGPQPLTKSVYTLPLANHQQE
RDGALSMVNVHVQHPPEASVTIHQVERVSEPSAPGQPPANALYTVLAQSSPHASGYHEDA
GYGYCFRQLHAGECSAPLPGLRTQDVCCHGAGVAWGVHECLPCATQTANAPALGRQEAPC
PKGFQRVNGSCQDVDECREGGFCQNGLCTNTPGSFSCLCHTGYILDSSRSSCISHHVISE
AKGPCYRVLRDGACSLPTLRNITRQICCCSRVGKAWGWGCQRCPLFGSDGFKEICPAGPG
YHYSASDLRYNARFLGPDQPRVPVGRQQGARTAAPPATARWSAQPPATLPPAPKAAQEGP
TSEPSSVCERNPEICGPGRCGPRQGGYTCLCHPGFWLSTQGTHCIDMDECRQSPHPCANG
HCENTVGSYRCVCAPGYRAAPPGTECRDIDECAQSPRPCAQGRCENTPGSYRCVCPTGYQ
PNPPGTSCTDIDECAQIPRPCAQGLCENTAGSYRCTCPRGFRASPAGSECLDVDECRQSP
RPCSYGRCENTPGGYQCVCPAGFRLDPQQHHCQDIDECENHLACPGQECVNSPGSFQCLP
CRDGHRLHNGHCTDVDECATGSPCGPHGRCSNTEGSFRCQCGPGYRAGAPGGPCADVNEC
LEGEFCFPHGECLNTDGSYTCLCAPGFAPAPSGTACLDVDECQHGGVCEGGHCANTDGSF
DCHCRAGFRASPDKHACQDVDECQQYGGALCGAQRCENQPGSYRCVPACEPGYRAGAAGA
CVDVDECQEYGGALCGAQRCENQPGSYRCVPACEPGYRAGAAGACVDVDECANGTLCGDH
AMCHNLPGSFQCLCDQGYETARDGRHCQDVNECETLQGVCGAELCENVEGSFLCICPSSA
QEFDPMTGRCTHPPSPPQRPGRLPAPQPEPEPGAPVRDPSRQECYYQACEKVLARNATRQ
ECCCSLGHTWGTACPAQPCPHPGTVEYQALCPRGNGYAAPGPLAALTDMDECALFNTQLC
RGGVCVNKAPGYACYCPNGYYYETHHLECIDNDECLDEEAEPCVGGGCVNTIGSFYCACT
PPLVLDGSQRRCVANDSQALDENQAVCWQEVGPDLVCSRPRLDRQVTYTECCCLYGEAWG
MDCALCPARDSDDFEALCNVLRPPSYGPARPGLGLPYEYGPEFVPGYGLPYGPELFASSA
ARGPQPGLRPDYDPYALGGYAGRHDSLYSSPTYEAGDFEDVAYVDXRPEEPPAPYRRPDA
PRTYRPRSPPDPEPGPAWNYPPNPASPFPEQPGQASETHADRFEGLQAEECGVLNGCENG
RCVRVPDGFTCHCHPGFRLDAAHMACLDIDECAEAEGPPALCLNGGCLNTDGSYRCLCPR
GYVLTPPPHSCIPARPQA
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccccgccctggctgccctcaccctgctggcctcgctgcagctgctggaggtg
cgaggggagggcacagctgggtcccaggtgctgagccccgcccccagggaccagcccccc
cggcctggccgccccgtccccgccgggccccaacccccccgcctggagaagcgcagccgg
accctggcccgtcgggggcagcgagcacccaaggcagccagcccccacgtgtgcggagtg
acctgctgcccaggctggagcctggctcccaaaacccagaagtgcacaaaagccatctgc
accccaaagtgccgcaatggggggctatgccaggagccccaagtctgcacctgccgcccg
gggttcgctggccgccggtgtgagcaactggtgccccctgaaccccccttggggctcccc
ccagggcccagtccccgcccgaccagcgcctccgccccgcgccccacagcccccaacgct
aggagggcagcgtccgtgcactggcagccgctgacgctggcagagctccaggccgtgctg
cggcgccgggccgctggccccacggacaagatggcgtcggtgctggccaagcacctggaa
gcccagcggggccgggccgcccgccccgcgcccccccccagcacccggccccccaagagc
gggcagaccctgcaccgcagccctcggcctgtcctgtgccccctgctctgccagaacggg
ggggtctgcatcaagaaggaccagtgtctctgcccccccagcttcaccggcaagttctgc
cagatcccggccccccggccccagcccccagccccagcgcagaaggaagacagcccaggg
gggccgcagcccctcaccaaatccgtctacaccctgcccctcgccaaccaccagcaggag
cgggacggtgccctgtccatggtgaacgtccacgtgcagcacccccccgaggcctcggtg
accatccaccaggtggagcgggtgagtgagcccagcgccccggggcagccgcccgccaac
gccctctacaccgtcctggcccagagcagcccccacgccagcgggtaccacgaggacgcc
ggctacgggtactgcttccggcagctccacgccggggagtgcagcgcccccctgcccggc
ctgcggactcaggacgtctgctgccacggtgccggcgtggcctggggcgtccacgagtgt
ctgccctgcgccacccagacagcgaatgcacccgccctggggcggcaggaggccccgtgc
cccaaaggcttccagcgggtcaatggctcctgccaggatgtggacgagtgccgggagggc
gggttctgccagaacgggctttgcaccaacacgcccggcagcttctcctgcctctgccac
acgggctacatcctcgactcctcccgcagcagctgcatctcccaccacgtgatctcggag
gccaagggcccctgctaccgggtcctgcgggacggggcctgctccctccccaccctgcgc
aacatcacccggcagatctgctgctgcagccgggtcggcaaggcctggggctggggctgc
cagcgctgcccgctcttcggctccgatggcttcaaggagatctgcccagcgggtcccggc
taccactactccgcctccgacctgcggtacaatgcccggttcctgggccccgaccagccc
cgcgtgcccgtcggccgccagcagggggcgcgcacggccgccccgcccgccacggcccgc
tggagtgcccagccccccgcaaccctgccacctgcccccaaagctgcccaagaggggccg
acctcagagcccagcagcgtgtgtgagcggaaccccgagatctgcggcccggggcggtgc
ggcccccgccagggcggctacacctgcctctgtcaccccggcttctggctcagcacccag
ggcacccactgcatcgacatggacgagtgtcggcagagcccgcacccctgcgccaatggg
cactgcgagaacaccgtggggagctaccgctgcgtctgcgcccccggctaccgcgctgcc
ccgccgggcaccgagtgccgagacatcgacgagtgtgcccagagcccccgcccgtgcgcc
cagggccgttgtgagaacacgcccggctcctaccgctgcgtctgccccaccgggtaccag
cccaacccccctggcaccagctgcactgacatcgacgaatgcgcccagatcccccgcccg
tgtgcccagggcctctgcgagaacacggccgggagctaccgctgcacctgcccccggggc
ttccgggccagtccggccggcagcgagtgcctggacgtggacgagtgccggcaaagccca
cggccctgcagctacgggcgctgcgagaacacgcccggcgggtatcagtgcgtctgcccg
gccggcttccggctcgacccccagcagcaccactgccaggacatcgacgagtgcgagaac
cacctggcctgcccggggcaggagtgcgtcaactcgcccggctccttccagtgtctgccc
tgccgggatgggcaccggctccataacgggcactgcacagacgttgacgagtgtgcgaca
ggctcgccctgcggcccccacggccgctgctccaacaccgagggctctttccgctgccaa
tgcggcccggggtaccgggcgggcgcgccggggggcccctgcgcagatgtcaacgaatgc
ctggagggcgagttctgcttcccgcacggcgaatgtctcaacaccgacggctcctacacc
tgcctgtgtgccccgggcttcgcccctgcgccaagcggcaccgcctgcctcgacgttgac
gagtgccaacacgggggggtgtgcgagggcgggcactgtgccaacacggacggctccttc
gactgccactgccgggccggcttccgggccagccccgacaagcacgcctgccaggatgtg
gacgagtgccagcagtatgggggcgccctctgcggggcccagcgctgcgagaaccagccc
ggctcctaccgctgcgtccccgcctgcgagccgggctaccgggccggtgctgccggggcc
tgtgtcgatgtggacgagtgccaggagtacgggggtgccctctgcggggcccagcgctgc
gagaaccagcccggctcctaccgctgcgtccccgcctgcgagccgggctaccgggccggt
gctgccggggcctgtgtcgacgtggacgagtgtgcgaacgggacgctgtgcggggaccac
gccatgtgccacaacctgcctggctccttccagtgtctctgcgaccagggctacgagact
gcccgtgacgggcgccactgccaggatgtgaacgagtgtgagacgctgcagggcgtgtgt
ggggccgagctctgcgagaacgtggagggctccttcctctgcatctgccccagcagcgcc
caggagtttgaccccatgacggggcgctgcacccacccgcccagccccccccagcgcccc
ggtcgcctgcccgccccccagcccgagcccgagcctggagcgcccgtgcgggaccccagc
cgccaggagtgctactatcaggcctgcgagaaggtgctggccaggaacgccacccgccag
gaatgctgctgcagcctggggcacacctggggcacggcctgcccggcccagccctgcccc
cacccgggcacagtggagtaccaggccctgtgcccccgtgggaacggctacgccgcacca
ggacccctcgccgcactcacagacatggacgagtgtgcactattcaacacccagctgtgc
cgggggggcgtctgcgtcaacaaggcccccggctacgcctgctactgccccaatggctac
tattacgagacgcaccacctggagtgcattgataatgacgagtgtcttgacgaggaggca
gagccctgcgtgggcgggggctgcgtgaacaccatcggctccttctactgcgcctgcacc
ccccccctcgtgctggacgggtcccagcgccgctgcgtggccaacgacagccaagccctg
gacgagaaccaggccgtgtgctggcaggaggtggggccggacctggtctgcagccgcccg
cgcctcgaccggcaggtcacctacaccgagtgctgctgtctgtacggggaggcctggggc
atggactgcgccctgtgccccgcccgagactcagatgacttcgaggctctgtgcaacgtc
ctgcgccccccgagctacggcccggcccggcctggcctggggctgccctacgaatacggc
cccgagttcgtccccggctacgggctgccctacggccccgagctgtttgccagctccgcg
gcgcggggcccccagcctggcctgcgccccgactatgacccctacgccctggggggctac
gccgggcgccacgactcgctctacagctcccccacctacgaggccggcgacttcgaggac
gtggcctacgtggacngccgcccggaggagccgcccgccccctaccggcggcctgacgcc
ccccgcacctaccggccccgcagccccccggaccctgagcccggcccggcctggaactac
ccccccaaccctgccagccccttccccgagcagccgggccaggccagcgagacccacgcc
gatcggttcgaggggctgcaggccgaggagtgcggggtcctgaacggctgcgagaacgga
cgctgcgtccgcgtccccgacggcttcacctgccactgccatcccggcttccggctggac
gccgcccacatggcctgcctggatatcgacgaatgcgccgaggccgaaggcccccccgcg
ctctgcctcaacgggggctgcctgaacacggacggctcctaccgctgcctctgcccccgc
ggctacgtcctcaccccacccccccactcctgcatccccgcccggccccaggcctga
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