Caretta caretta (Loggerhead turtle): 125628135
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Entry
125628135 CDS
T09292
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125628135 (SAMD4B)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125628135 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
125628135
NCBI-ProteinID:
XP_048688905
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All DBs
Position
27:complement(8990076..9026826)
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AA seq
686 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCTEIHIVES
EANSAAVISQWHQESKDKVVSLLLSHLPLLQPGNTEAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSSGYSGQGRGRPDTAYHSRQGSDEWQ
GPVDSGMGELGHGWQEKLPRENGHLPFHSSSSVPSAINSIGSNANAALPCQIHPSPLKRS
MSLIPTSPQAPGEWMSPDELCARQAFIPGDHAPLSPQSSVASSGSEQTEEQIGSRNTFQE
DGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQKL
RERQSVLKSLEKDILEGGNLWNALQELQQIIITPIKAYSSLQAMPTPKEGQQAVPERHGA
PRPGLDKATNGAEDKEPVVDGFPSQTASPCDGESATAPIAEGDIPGQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRAFPRKAVLDMQGYRQ
QKGWAFGSNSLPIAGSVGVGVARRGQRPFQMPPRAMPPSRLGLLSPAGMGGVLPRHALTS
PIGSQGRQNLWFANPGGSNSMPGQSRSSVQRTHSLPVHTSPQAIIMFPQDCQIPGTDLEI
NPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaggtgggaatcctggccggctggttcaaaggctggaatgaatgc
gagcagacggtggctctgctctccctcctcaagcgtgtcactcgcacccaagcccgcttc
ctgcagctgtgcctggagcactcgctggccgactgcaccgagatccacatcgtggagtcg
gaggccaacagcgcagctgtcatcagccagtggcaccaggaatcgaaggacaaggtggtc
tccctgctcctgtctcacctgcccctgctacagcctggcaacacggaagccaagtccgaa
tacatgaagctattgcagaaggtcctggcctactccatcgagagcaacctgttcatcgag
gaaagccggcagctgctgtcctacgccctcatccacccggccaccacgctggacgatcgc
aactccctggccctatggctcaaccaccttgaggaacgcctgtctagcggctactccggc
cagggcaggggccggcccgacactgcataccactcgcgccagggctcggatgagtggcag
ggcccggtggactcgggcatgggggagctgggacacggctggcaggagaagctgccccga
gaaaacggacacttgcctttccactcctccagctcggtgccctctgccatcaacagcatt
ggaagcaacgcaaatgcagctctgccctgccaaatccaccccagcccgctcaagcgctcc
atgtccctcatccccaccagcccgcaggcccctggcgagtggatgagccccgatgagctg
tgtgcccggcaggctttcatcccgggggaccacgcgcccctgtccccccagagcagcgtg
gcctcctcgggcagcgaacagacggaagagcagatcggcagccgcaacaccttccaggag
gatggcagtggcatgaaagatgtcccctcgtggctgaagagccttcgcctgcacaagtac
gcagccctcttctcccagatgacgtacgaagagatgatgaccctcacggagcagcatctg
gagtcccagaacgtgaccaaaggagccaggcacaaaattgccctgagcatccagaagctg
cgggagaggcagagcgttctcaagtctctggagaaggacatccttgaaggagggaacctg
tggaacgcgctccaggagctccagcagataatcatcacgcccatcaaagcatacagctcc
ctccaggccatgcccacgcccaaggaggggcagcaggcggtgcccgagcgccacggagcc
cccaggccgggcctggacaaagccaccaatggggcagaggacaaggagcctgtggtggac
ggcttcccatcccagacggcctccccctgcgacggggagtcggccacagcacccatcgcg
gaaggggacatcccggggcagttcacccgggtgatggggaaagtgtgcacacagctgctc
gtctcccggcctgatgaggagaacatcaccagttacctccagctcatagagaagtgcctg
actcacgaggcattcacggagacgcagaagaagaggctgttgtcctggaagcagcaggtg
ctgaagctgcttcgggcgttccctcggaaggcagtgctcgacatgcaagggtaccgccag
cagaaaggatgggcctttggttccaactctctccccatagctggatctgtgggggtgggt
gtcgcgcgcagagggcagcggccgttccagatgccccctcgagccatgcccccgagccgc
ctggggctgctgagcccagcggggatgggaggggtcttgcctcggcatgcacttaccagc
cccatcgggagccagggacgacagaacctgtggttcgccaatcccgggggcagcaacagc
atgcccggccagagccgcagctcggtccagcgcacccattcgctacccgtccacacgtcc
ccgcaggccatcatcatgttcccccaggattgccagatccctggaacagacctggagatc
aaccccacgctggagtcgctgtgcctgagcatgacggagcacgcgctgggcgatggcacc
gacaagacctccaccatctga
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