Caretta caretta (Loggerhead turtle): 125628182
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Entry
125628182 CDS
T09292
Symbol
NFKBIB
Name
(RefSeq) LOW QUALITY PROTEIN: NF-kappa-B inhibitor beta
KO
K02581
NF-kappa-B inhibitor beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04621
NOD-like receptor signaling pathway
ccay04622
RIG-I-like receptor signaling pathway
ccay04623
Cytosolic DNA-sensing pathway
ccay04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125628182 (NFKBIB)
04622 RIG-I-like receptor signaling pathway
125628182 (NFKBIB)
04623 Cytosolic DNA-sensing pathway
125628182 (NFKBIB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125628182 (NFKBIB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125628182 (NFKBIB)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
125628182 (NFKBIB)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
125628182
NCBI-ProteinID:
XP_048688994
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Position
27:complement(9450514..9458589)
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AA seq
369 aa
AA seq
DB search
MAAPQPAAALGEAKRPEAGEDWCDSGLGSLSEGQLSQIQDGLGAPPEKPXPGPGPGPAAG
APEACGSVSERLDSALGEEEAGWGAAAGPELGALARGVEAVRLGDPAAGPGEAPAGAPGA
WLRHVLGFVTEDGDTALHLAVIHEHEAFLDSILQYTAGTEYLDLQNDLGQTALHIAVILG
ASNFVRKLMAAGAGLCVQEKAGHTALHLACREGCQDCAQWLLTSLSGHRPCEGNDACAQL
DCTNYDGYTPLHVAVLRKDLEVVKLLVGAGADLNKAELSCGRSPLHLAVESQSAEVVECL
LRAGADPRARMYVGYTPIYSAIHRPNQKVLQLLREFGSEEPDWDSEESLAESSDEEYDDI
VINSGHYKN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcagccggcggccgcgctcggggaggccaagcggccggaggcgggcgag
gactggtgcgacagcggcctgggctcgctgagcgaggggcagctcagccagatccaggac
ggcctgggggccccgccggagaagcccnccccgggcccgggcccgggcccggccgccggc
gcccccgaggcctgcgggtcggtctccgagcgcctggactctgcgctgggcgaggaggaa
gccggctggggggcggccgcggggccggagctgggggcgctcgcccggggcgtggaggcc
gtgcggctcggggaccccgcggccgggcccggggaggcgcccgcgggggcccccggggcc
tggctgcgccacgtcctgggcttcgtgaccgaggacggggatacagctctccacctggct
gtgattcacgaacatgaggcctttctggattctatcttgcagtacacggctgggacggaa
tacttggatctgcagaacgacctgggccagacggcactgcacatcgcagtcattctcggc
gcctccaactttgtccgcaagctgatggcagccggggcggggctctgcgtgcaggagaaa
gctggccacaccgcgctgcacctggcatgccgggagggctgccaggactgcgcacagtgg
ctcctgacatcgctgagcgggcacaggccctgcgaggggaatgatgcctgcgctcagttg
gactgcaccaattatgatggttacacgccgctgcatgtggctgtcctgcggaaggacctt
gaagtggtcaagctccttgtgggtgccggagccgatctcaacaaggcagagctgagctgt
ggccggagtcccctccacttggcagtggagtcgcagagcgcggaagtagtggagtgtctg
ctgcgtgccggagcggacccgagggcccggatgtacgtcggttacacccccatctatagc
gccatacacaggcccaaccaaaaggtcttgcagctgctccgggagttcggctcggaggag
cccgactgggattcggaggagagcctggctgagagcagcgacgaggaatacgacgacata
gtcatcaacagtggacactataagaactga
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