Caretta caretta (Loggerhead turtle): 125628320
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Entry
125628320 CDS
T09292
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04514
Cell adhesion molecule (CAM) interaction
ccay04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125628320 (LRRC4B)
04517 IgSF CAM signaling
125628320 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125628320 (LRRC4B)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
NGL family
125628320 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_At5g56370
LRR_EndoS
LRR_RPS2
DUF7617
Insulin_TMD
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
125628320
NCBI-ProteinID:
XP_048689242
LinkDB
All DBs
Position
27
Genome browser
AA seq
645 aa
AA seq
DB search
MAAPRCCSRRGPPPPRPSRMLWKPVLLLGLWLPSLAWAGASPTPCPAACSCSNQASRVIC
TRRELVEVPESISINTRYLNLQENNIQLIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLATVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSFQGL
TSLRKLWLMHAQVSTIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHAPANLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAVDPAATGYTYFTTVTVETLETAQEDALPTKKEPGPTP
AVGWDVTYSTTSLTPRSTRSTEKPYTVPITDAAEGGMKDLDDVMKTTKIIIGCFVAITFM
AAVMLIVFYKLRKQHQFHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDHLNH
YAAFKAHYNNNAGALACAKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccccgttgctgctcccggagggggccgccgcctccccgtccctctaggatg
ctctggaagccggtcctgctgctggggctgtggctgccctccctggcgtgggccggagct
tcgcccactccctgcccggccgcctgctcctgcagcaaccaggccagccgggtgatctgc
acgcgccgggagctggtggaggtgccggagagcatctccatcaacacgcggtacctcaac
ctgcaggagaataacatccagctcatcaagaccgacaccttcaagcacctgcggcacctg
gagatcctgcagctgagcaagaacctgatccgcaagatcgaggtgggcgccttcaacggc
ctgcccaacctcaacacgctggagctcttcgacaaccgcctggccacggtgcccacccag
gcctttgagtacctctccaagctgcgggagctgtggctgcgtaacaaccccatcgagagc
atcccgtcctacgccttcaaccgggtgccctccctgcgccgcctggacctgggggagctc
aagaagctggagtacatctccgaggcggccttcgaagggctggtgaacctgcggtacctg
aacctgggaatgtgcaacctcaaggacatccccaacctgacggcactggtgaggctggag
gagctggagctgtcgggcaaccggctggacatgatccgccccggctccttccagggcctc
accagcctgcgcaagctgtggctgatgcacgcccaggtgtccaccatcgagcgcaacgcc
ttcgacgacctcaagtcgctggaggagctgaacctgtcccacaacaacctcatgtccttg
ccccacgacctcttcacccccttgcaccggctggagcgggtgcacctcaaccacaacccc
tggcattgcaactgtgacgtcctctggctcagctggtggctgaaggagacggtgcccaac
aacaccacctgctgcgcccgctgccacgccccggccaacctcaaggggcgttacatcggc
gagctggaccagagccacttcacctgctacgccccggtcatcgtcgagccgcccaccgac
ctcaacgtgacggaggggatggcggcggagctgaagtgccggacgggcacctccatgacc
tcggtcaactggctgacgcccaacgggacgctgatgacgcacggctcgtaccgggtgcgg
atttccgtcttgcacgacggcacgctcaacttcaccaacgtgacggtgcaggacacgggg
cagtacacctgcatggtgaccaactcggccggcaacaccacggcgtcggccaccctcaac
gtctcggccgtggacccggccgccaccggctacacctacttcaccaccgtgaccgtggag
acgctggagacggcccaggaggacgcgctgcccaccaagaaggagccgggccccacgccc
gccgtgggctgggacgtgacctactccaccacctccctgacgccccgctccacccgctcc
acggagaagccctacaccgtgcccatcaccgacgcggccgagggcggcatgaaggacctg
gacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatcaccttcatg
gcggctgtcatgctgatcgtcttctacaaactgcgcaagcagcaccagttccacaagcac
cacggccccacccgcaccatcgagatcatcaacgtggaggacgagctgccggccgcggcc
ggcgcccccggcgacagccacctggccctgccggccctggagcacgaccacctcaaccac
tacgcggccttcaaggcccattacaacaacaacgcgggggccctggcctgcgccaagaac
cccctgctgaactccatccacgaacctctgctgttcaagagcagctcaaaggagaacgtg
caggagacgcagatctga
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