Caretta caretta (Loggerhead turtle): 125628339
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Entry
125628339 CDS
T09292
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125628339 (APEX2)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125628339 (APEX2)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125628339 (APEX2)
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GFIT
Motif
Pfam:
GARIL_Rab2_bd
Zn_ribbon_GRF
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
125628339
NCBI-ProteinID:
XP_048689265
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All DBs
Position
27:1255227..1262765
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AA seq
760 aa
AA seq
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MHEEFVLPYYTADCDQARGLMNTAMGPLQRQLRAGEYEIFQYAPIFESDFIQISKRGEVV
DVHNRVRVVTVGVACTSPALLVPNVLLLARPVVPSEESRGRRGPPAKALELTRLLPLRFV
KISVHDSDMRQLRLKLASGRSFYLQLCPQGDTHCELFDMWVQIVNLLRPPAEGSYGGQAL
PGDPGAFGEPLFRGISQDTTGSLESLAAEEEGLDALSVRSLRTASPSRDDPESLRSRTPP
SLSPSLPRKPPSVGRGSQRGGSTGERRSQAESPGGSPAPQERNQGSLQGSQGSSPLSKKK
ESSRRADRGGGTTRSKSSQTRSVATFCKDSATPLAAEEGLSGLLAQPGEGGAVGCYGDLG
AFTPQELKALDSEGRAVITHHRIRTSAQQETTLTVINVYCPRADPQRPERAAYQASFYRL
LQGRAEALLRDGGHVVILGDINTSHRPIDHCEPGDLEAFQEHPGRRWLDGFLWVPDGPPG
QGLFIDTFRLLHPSQPYAFTCWRIDTGARLTNYGTRLDYVLADRALALAELRDARVLPEV
PGSDHCPVLAELAATFLPARRCPPLCTRHMPEFAGTQQKLSRFLVRVERGAGAMCQAAGA
GRGCSTQRGRRPPRGQGDLLSYFRASQGQLRTGTTPNALGQSGQEPAQDAPGHRTQEMAH
DAPGQGGQREPCNGLVPRELMMGQAAGTQDSCTARWRAVLPGPAPPPCCPAHGQPCALRT
VRKPGPNRGRRFYVCAQPPGRPSDPRARCDFFRWASKGRS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggagttcgtcctgccgtattacacggcggattgcgaccaggcgcgagggctg
atgaacacggccatggggccactgcagcgccagctccgggcgggcgagtacgagatcttc
cagtacgcccccatattcgagagcgacttcatacagatcagcaagcgcggggaggtggtg
gacgtgcacaatcgtgtccgagtggtcacggtgggcgtggcctgcaccagcccagccctc
ctggtgcccaacgtgctgctgctggcccggcccgtggtcccctccgaggagagccggggc
cgccggggtccccctgccaaggcactagagcttaccaggctgctcccgctgcggtttgtg
aagatctcagtgcacgacagcgacatgcggcagctgcggctcaagctggccagcggccgc
tcgttctacctgcagctctgcccccagggcgacacccactgcgagctcttcgacatgtgg
gtgcagatcgtcaacctcctccggccgcccgccgaggggagctacgggggccaggctctg
cccggagaccccggggctttcggggaacccctgtttcgaggcatcagccaggacaccacc
gggagcctggagtcactggccgccgaggaagagggcctggatgccttgagcgtccgcagt
ctccggaccgccagcccctccagggatgacccagagagcttgcgcagccggacccccccc
agcctcagcccctcgctgccccgcaagccgcccagcgtggggagggggtcgcagcggggc
gggtccacaggggagcgcaggagccaggctgagtcgccaggggggtcaccggccccccag
gagaggaaccagggcagcctgcagggcagccaggggagcagccccttgagcaagaagaaa
gagtccagcaggcgggcagatcgaggagggggaaccacacggagcaaatcatcgcagacc
cggagtgtggcgaccttctgtaaggacagtgccaccccgctggcagcggaggaggggctc
tctgggctcctggcccagcctggggagggcggtgccgtggggtgttacggagacctaggg
gccttcacaccccaagagctgaaggcgctggacagcgaggggcgcgcggtgatcacccac
caccgcatacgcacctcagcacagcaggagaccactctgacggtgatcaacgtgtactgc
ccccgggccgacccccagcgccccgagcgcgccgcctaccaggcgtccttctaccgcctg
ctgcagggccgggccgaggcgctgctgagagacgggggccacgttgtgatcttgggggac
attaacacatcgcatcggcccatcgaccactgcgagcccggggacctggaagcgttccag
gagcacccaggccggcgctggctggatgggttcctatgggtgccagacgggccccccggg
caggggctcttcatcgacaccttccgcctcctgcaccccagccagccctatgccttcacc
tgttggcgcatcgacactggcgcccggctcaccaactacggcacacggctagactacgtc
ctggctgaccgggccctggcgctggccgagctgcgggacgcccgcgtcctgcccgaggtg
cccggctccgaccactgccccgtgctggccgagctggcggccaccttcctgccggcgcgc
cgctgccccccgctctgcacccgccacatgcctgaattcgccggcacccagcagaagctc
agccgctttttggtcagggtggagcggggagcgggcgcgatgtgtcaggcggctggggcg
gggcgggggtgctctacacagagggggagacgcccacccagggggcaaggagacctgctg
agctacttcagagcctcacagggccagctgaggacaggcacgaccccgaatgcactgggg
cagagcggacaagagccagcccaggatgccccagggcacaggacacaggagatggcccat
gatgcaccagggcagggtggacaacgggagccctgcaatggcttggtgcccagggagctg
atgatggggcaggcagcaggcacccaggacagctgcacagcccgctggcgtgcagtgctg
cccggcccggcccccccaccctgctgcccggcccatgggcagccctgtgccctgcgcacc
gtccgcaaacccggccccaaccgtgggcggcgtttctacgtgtgcgcccagccccctggg
cgccccagcgacccccgcgcccgctgcgacttcttccgctgggccagcaaggggcgctcg
tga
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