KEGG   Caretta caretta (Loggerhead turtle): 125628392
Entry
125628392         CDS       T09292                                 
Symbol
NR1H2
Name
(RefSeq) oxysterols receptor LXR-beta
  KO
K08535  liver X receptor beta
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    125628392 (NR1H2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccay03000]
    125628392 (NR1H2)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ccay03310]
    125628392 (NR1H2)
Transcription factors [BR:ccay03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    125628392 (NR1H2)
Nuclear receptors [BR:ccay03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   125628392 (NR1H2)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 125628392
NCBI-ProteinID: XP_048689357
LinkDB
Position
27:complement(2670373..2681525)
AA seq 431 aa
MATTGSDLPLEDGESLPPNSPGAPRTQVKVEGPQSRPEAAITPETEVLGTDGEGSTHSAA
EEPERRRRKGPAPKMLGSELCSVCGDKASGFHYNVLSCEGCKGFFRRSVMKGAQYVCRGA
GHCHMDLYMRRKCQLCRLRKCHQAGMREQCVLSEEQLRKKKVRRQQGLGGEAPPRGPPLP
PTPPAEPAQLSPQQELMIQQLVAAQQQCNKRSFSDQPKVTPWPLGTDPNSREARQQRFAH
FTELAIISVQEIVDFAKQVPGFLQLTREDQIALLKACTIEIMLLETARRYNHETESITFL
KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLQLDDAEFALLIAIDMFAADRPNVQQHG
QVEALQLPYVEALHAYTLIKRPQDRLMFPRMLMKLVALRTLSSVHSEQVFALRLQDKKLP
PLLSEIWDVHE
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggccaccacgggctccgacctgccgctggaggatggggagtcactgccccccaactcc
cccggagccccccggacccaggtgaaggtggaggggccccagtcgaggccggaggcagcg
atcaccccagagaccgaggtgctgggcactgatggggaggggtcgacgcacagtgctgcg
gaggagccggagcggcggcggaggaaggggccggcgccgaagatgctgggctcggagctg
tgcagcgtctgcggggacaaggcctcgggtttccactacaacgtgctgagctgcgagggc
tgcaagggcttcttccggcgcagcgtgatgaagggggcgcagtacgtgtgccggggcgcc
gggcactgccacatggacctctacatgcgccgcaaatgccagctctgccggctccgcaag
tgccaccaggccggcatgcgcgagcagtgcgtgctgtcggaggagcagctgcggaagaag
aaggtgcggcggcagcaggggttggggggggaggcgccgccgcgagggccccccctgccc
cccacacccccggcggagccggcccagctcagcccccagcaggagcttatgatccagcag
ctggtggctgcccagcagcagtgcaataagcgctccttcagcgaccagcccaaggtcacg
ccatggcccctgggcactgaccccaacagccgggaggcccgacagcagcgcttcgcccac
ttcaccgagctggccatcatctcggtgcaggagatcgtcgacttcgccaagcaggtgcct
ggcttcttgcagctcacaagggaggaccagatcgcgctgctcaaggcctgcaccatcgag
atcatgctgctggagacagcccggcgctacaaccatgagacggagagcatcaccttcctg
aaagacttcacctacagcaaggacgacttccaccgtgccggcctgcaggtggagttcatc
aaccccatcttcgagttctcgcgggccatgcggcggctgcagctggacgacgcggagttc
gccctgctcatcgccatcgacatgttcgcggccgaccggcccaacgtgcagcagcacggc
caggtggaggcgctgcagctgccctacgtcgaggccctgcacgcctacaccctcatcaag
cgcccgcaggaccggctgatgttcccgcggatgctgatgaagctggtcgccctacgcaca
ctcagcagcgtccactcggagcaggtgttcgccctccgcctccaggacaagaagctgccc
ccgctgctctccgaaatctgggacgttcacgagtaa

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