Caretta caretta (Loggerhead turtle): 125628392
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Entry
125628392 CDS
T09292
Symbol
NR1H2
Name
(RefSeq) oxysterols receptor LXR-beta
KO
K08535
liver X receptor beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125628392 (NR1H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125628392 (NR1H2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccay03310
]
125628392 (NR1H2)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125628392 (NR1H2)
Nuclear receptors [BR:
ccay03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125628392 (NR1H2)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
125628392
NCBI-ProteinID:
XP_048689357
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Position
27:complement(2670373..2681525)
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AA seq
431 aa
AA seq
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MATTGSDLPLEDGESLPPNSPGAPRTQVKVEGPQSRPEAAITPETEVLGTDGEGSTHSAA
EEPERRRRKGPAPKMLGSELCSVCGDKASGFHYNVLSCEGCKGFFRRSVMKGAQYVCRGA
GHCHMDLYMRRKCQLCRLRKCHQAGMREQCVLSEEQLRKKKVRRQQGLGGEAPPRGPPLP
PTPPAEPAQLSPQQELMIQQLVAAQQQCNKRSFSDQPKVTPWPLGTDPNSREARQQRFAH
FTELAIISVQEIVDFAKQVPGFLQLTREDQIALLKACTIEIMLLETARRYNHETESITFL
KDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLQLDDAEFALLIAIDMFAADRPNVQQHG
QVEALQLPYVEALHAYTLIKRPQDRLMFPRMLMKLVALRTLSSVHSEQVFALRLQDKKLP
PLLSEIWDVHE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacgggctccgacctgccgctggaggatggggagtcactgccccccaactcc
cccggagccccccggacccaggtgaaggtggaggggccccagtcgaggccggaggcagcg
atcaccccagagaccgaggtgctgggcactgatggggaggggtcgacgcacagtgctgcg
gaggagccggagcggcggcggaggaaggggccggcgccgaagatgctgggctcggagctg
tgcagcgtctgcggggacaaggcctcgggtttccactacaacgtgctgagctgcgagggc
tgcaagggcttcttccggcgcagcgtgatgaagggggcgcagtacgtgtgccggggcgcc
gggcactgccacatggacctctacatgcgccgcaaatgccagctctgccggctccgcaag
tgccaccaggccggcatgcgcgagcagtgcgtgctgtcggaggagcagctgcggaagaag
aaggtgcggcggcagcaggggttggggggggaggcgccgccgcgagggccccccctgccc
cccacacccccggcggagccggcccagctcagcccccagcaggagcttatgatccagcag
ctggtggctgcccagcagcagtgcaataagcgctccttcagcgaccagcccaaggtcacg
ccatggcccctgggcactgaccccaacagccgggaggcccgacagcagcgcttcgcccac
ttcaccgagctggccatcatctcggtgcaggagatcgtcgacttcgccaagcaggtgcct
ggcttcttgcagctcacaagggaggaccagatcgcgctgctcaaggcctgcaccatcgag
atcatgctgctggagacagcccggcgctacaaccatgagacggagagcatcaccttcctg
aaagacttcacctacagcaaggacgacttccaccgtgccggcctgcaggtggagttcatc
aaccccatcttcgagttctcgcgggccatgcggcggctgcagctggacgacgcggagttc
gccctgctcatcgccatcgacatgttcgcggccgaccggcccaacgtgcagcagcacggc
caggtggaggcgctgcagctgccctacgtcgaggccctgcacgcctacaccctcatcaag
cgcccgcaggaccggctgatgttcccgcggatgctgatgaagctggtcgccctacgcaca
ctcagcagcgtccactcggagcaggtgttcgccctccgcctccaggacaagaagctgccc
ccgctgctctccgaaatctgggacgttcacgagtaa
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