Caretta caretta (Loggerhead turtle): 125628528
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Entry
125628528 CDS
T09292
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125628528 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125628528 (CHRNE)
Ion channels [BR:
ccay04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125628528 (CHRNE)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125628528
NCBI-ProteinID:
XP_048689518
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All DBs
Position
28:587766..603838
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AA seq
514 aa
AA seq
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MRGLGVLLLALLCGGVSALPAPQGARGGNEELRLYEKLFADYDKNTRPVRHPDDTVEVQI
MLTLTNLISLNEKEETLTTNVWIKIEWVDYRLNYSNSEFKGIRSLRVPSDMVWLPDIVLE
NNIDGQFEIAYYANVLVYPGGAMYWLPPAIYRSTCAIEVTYFPFDWQNCSLVFQSQTYSA
NEVELQLSINEKTARPFDEIDIDPAAFTENGEWAIRHRPAWKVLHPELGREALGFQEIRF
SLIIQRKPLFYIINIIVPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTVFLFLIAQ
KVPETSLSVPLIGKYLMFVMGVATLIVMNCVIVLNVSLRTPNTHCMSEQLKHVFLEVLPR
YLGSALEPMGDPWAAPPARRRSSFAIMLKAEEYILKKPRSEILFERQGQRHGLTRPPACD
GVDVGVTSTLYKNLANAAPEIRACVEACTFITETTREQNASSAAMENWVLIGKVIDKLCF
CAAILLFTIGTLSIFLMGHFNQVPDDPFPLQPDP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcggggactgggggtgctgctcctcgccctgctgtgcgggggggtcagtgccctgcct
gccccacaaggggcccggggcgggaacgaggagctgcggctctacgagaaactcttcgcc
gactacgacaagaacacgcggccggtgaggcaccccgacgacacggtggaggtgcagata
atgctgacgctgaccaacctcatctcgctgaatgaaaaggaggagactctgaccaccaat
gtctggataaagattgaatgggtggactatcggctgaattatagcaacagtgaattcaaa
gggatccgctccctgcgggtcccctccgacatggtctggctgccggacatcgtcctggag
aacaacatcgacgggcagtttgagatcgcctactacgcaaacgtgctggtgtaccccggg
ggggccatgtactggctgccccccgccatctaccgcagcacctgtgccattgaagtcacc
tacttccccttcgactggcagaactgctccctcgtcttccagtcccagacgtacagcgct
aacgaggttgaactgcagctctcaatcaatgagaagacagcccgcccctttgacgagatc
gatatagaccctgccgccttcacagagaatggggagtgggccatccggcaccggccggcc
tggaaggtactgcacccagagctgggccgggaggcgctcggcttccaggagatccgcttc
tcactcatcatccagcgcaagcccctcttctacatcatcaacatcatcgtcccctgcgtg
ctcatctcctccctcgtcgtcctggtctacttcctgcccgcccaagccggcggccagaaa
tgcaccctctccatctcagtgctgctggctcagactgtcttcctcttcctcatcgcccaa
aaagtcccagagacctcgctcagcgtccccctcattggcaagtacctgatgttcgtcatg
ggagtggcgacgctgatcgtgatgaactgtgtcattgtgctgaacgtttccctgcgaacg
ccaaacacccactgcatgtctgagcaactcaaacatgtgttcctagaggtgctgccacgg
tacctgggctcggccctggaacccatgggggacccctgggccgcgcccccggcccggcgg
cgcagctccttcgccatcatgctcaaagcggaggagtacatcctcaagaagccgcgcagc
gagatcctctttgagcggcagggccagcggcatggcctcaccaggccccccgcctgtgat
ggggtggatgtgggtgtcaccagcaccttgtacaagaacctggccaacgcggcccccgag
atccgggcgtgcgtggaggcctgcaccttcatcacagagaccacaagggagcagaatgcc
agcagtgccgcgatggagaactgggtgctgatcgggaaggtgattgacaagctctgcttc
tgtgccgccatcctgctcttcaccatcggcaccctcagcattttcctcatgggacatttc
aaccaggtgcccgacgaccccttccccctgcagccggacccatag
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