Caretta caretta (Loggerhead turtle): 125628558
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Entry
125628558 CDS
T09292
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125628558 (GIGYF1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125628558 (GIGYF1)
Surveillance factors
Other surveillance factors
125628558 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
125628558
NCBI-ProteinID:
XP_048689547
LinkDB
All DBs
Position
28:1030470..1056688
Genome browser
AA seq
1035 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLAEYRYGREEMLALYVKENKVPEEL
QDKEFAAILQEEPLQPLALVPLTEEEQRNFSMSVNSMAVLRLMGKGGGVAPTGVSRGRGS
TRSRGRGRGESGFYQRSPEEPEGAFGRGAREIHRSQSWDDRGERRFEKPTRRDGTRAPFE
EGALPPRKDYARSDSNNWRTLREEQEEEEEAGGGAGPTPAGAAAGGSWRLSGARRESERW
RSASPDGAPRSAGWREHPEGRRRKFDFDFREREEDRGGRRHRGSDSFEDDKDGLPEWCMD
DEDEEMGTFDSSGAFMPLKKSPKEPIPEEQVFDFHPLQEDEERSEGKEDAEPGSKEAPEK
EARKDPSTAPEEKRCSPPGAPWLSGPPFAATVATATSECESTLLGGSDPAAPLGTCDKEP
KPAAEGDPGVLGLPSQLSPGAVSTLPAPSSTPNAATEFSIGDTEDEDGMKHLQQEAEKMV
AALQESSMDEERFTQAIQEPRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTQEMAEWFQ
AGYFTMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNLDQERLKKQQELAAA
ALYHQLQHQQFLQLVNRYLPDRPQFAQCALQQKLAAGDLTQQQLTAFLQQLQALKPRAGE
QNLIPAMNRSMSVPDTGSLWDTHTSASQPAGGEASLWDIPITSSTQGPILEQLQLQQKLQ
ERRDAELRAKREEEERKRREEKRRQEEQKRREEEELYRRKQCRQQELVLKLLQAQSVAPW
GGLAKPPGGMKALLELQESERQLQKQQRVQQRAHGGLGMNSPSQWGADSSQLWSSHEKSS
PWDEGVKNVRSLGLKSSRSSPSLGDSYGGPGRQSRKKTDEEEKLLKLLQGIHKPQDGFTQ
WCEQMLHVLNSCSNLDVPTVVAFLKEVESPYDVHDFIRSYLGDTPEAKEFAKQFLERRAK
QKASQQRQQQQEASWLSSSNLPSPFPANHGTKQPPFEGSQPVKIKRRPVMLHADPSILGY
SLHGPSGEVESIDDY
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagacgctcaattttggaccggaatggctccgcgcgctgtccagtgggggg
agcgtggcttcccccccgccctctcctgccatgccaaagtacaagctcgctgagtatcgc
tacggcagagaagagatgctagcactttatgtcaaagagaacaaggtcccagaggagctc
caggataaggaattcgctgccattctccaggaggagccgctgcagccgctggccctggtc
ccactaacggaggaggagcagaggaatttctccatgtctgtgaacagcatggcggtgctg
aggctgatgggaaaaggaggcggagtcgctcccactggagtctcccgggggaggggcagt
acccggagccgaggccggggccgaggcgagagcgggttttaccaaagaagtccggaggaa
ccggagggggcgtttgggcgcggggcccgggagatccaccgcagccaaagctgggatgac
aggggcgagcggcggttcgagaagccaacccggcgggatggaacccgggctcccttcgag
gagggggccctgcccccccgcaaggactatgcccgctcggacagcaacaactggcggacg
ctgcgggaggagcaggaggaggaggaagaggcgggggggggtgccgggcccacccccgcc
ggggcggccgctgggggcagctggcggctgagcggggcccggcgcgagagcgagcgctgg
cggtcggccagcccagacggcgccccccgctcggccggctggcgggagcaccccgagggc
cggcggcgcaagttcgacttcgacttccgggagcgggaggaggaccggggcgggcggcgg
caccggggcagcgacagcttcgaggacgacaaggacgggctgcccgagtggtgcatggac
gacgaggacgaggagatgggcaccttcgactcctccggcgccttcatgcccctcaagaag
agccccaaggagccaatccctgaggagcaggtgttcgacttccatccgttgcaggaagat
gaggagaggtcggaggggaaggaggacgcggagcctggctcgaaggaggcccctgagaaa
gaggcccggaaggatccctcgacggccccggaggagaagcgatgttccccgcccggcgcc
ccctggctgtcgggccccccctttgctgctactgttgccactgccactagtgaatgtgag
agcaccctgctggggggctcggaccccgccgcgccccttggcacctgcgacaaggagccg
aagcctgctgcggaaggggacccaggcgtcctgggcctcccgtctcagctcagcccgggc
gcggtctccaccctccccgccccttcctccacccccaatgctgctactgagttctccatc
ggggacactgaggacgaagatgggatgaaacatcttcagcaggaagccgagaagatggtt
gccgcgctccaggagagctccatggacgaggagcgcttcacccaggccatccaggagcct
cgcaacacggctgccgccctgcccctctcccacgaggccgccatgaagtggttctacaag
gacccccagggggagatccaagggcccttcaccacgcaggagatggcggagtggttccag
gccggctatttcaccatgtcgctgctggtgaagcgaggctgtgacgagggcttccagccg
ctgggcgaggtgatcaagatgtggggaagagtgcctttcgctccgggcccgtcgccgccc
ccgctgctggggaacttggaccaggagcggctgaagaagcagcaggagctggccgcggcc
gccctctaccaccagcttcagcatcagcagttcctgcagctcgtcaacaggtacctgcca
gacaggccgcagtttgcccagtgcgcgctgcagcagaagctggcggccggggacctgacc
cagcagcagctcacggctttcctgcagcagctgcaggctctgaaaccccgagctggggag
cagaacctgatcccggcgatgaaccgatccatgtccgtgccagacacagggtccctgtgg
gacacgcatacctcagcctcacagcccgcaggcggtgaggccagtctatgggatatacca
attacttcttcaactcagggtccaatcctagaacaactgcaactgcaacagaaactccag
gagcggcgcgatgcggagctcagggctaagcgggaggaggaggaacgcaagcggcgcgaa
gagaagcggcgccaggaggagcagaagcggcgcgaggaggaggagctgtatcggcgcaaa
cagtgccggcagcaggagctggtgctgaagctgctgcaggcgcagagcgtggcgccctgg
gggggcctggccaagccccccgggggcatgaaggccctgctggagctgcaggagagcgag
cggcagctgcagaagcagcagcgggtgcagcagagagcgcacggggggctcggcatgaac
agcccctcgcagtggggcgccgactccagccagctgtggagcagccatgagaagagcagc
ccgtgggacgagggcgtcaagaatgtgaggagcctgggcctgaagagcagccgcagcagc
ccctccctcggggacagctacggggggccgggccggcagagccggaagaagacggacgag
gaggagaagctgctcaagctgctgcaggggatccacaagccccaggacggcttcacgcag
tggtgcgagcagatgctgcacgtcctgaacagctgcagcaacctcgatgtccccacggtg
gtggcgttcctgaaggaggtggagtccccctacgacgtgcacgacttcatccgctcctac
ctgggcgacaccccggaagccaaagagtttgccaagcagttcctggagcgccgcgccaag
cagaaagccagccagcaacgccagcagcagcaggaagcctcctggctcagctccagcaac
ctgccctccccgttcccggccaaccacggcaccaaacagccgcccttcgagggcagccag
ccggtgaagatcaagaggagaccggtcatgctgcacgctgaccccagcatcctgggctat
tcgctgcacggcccgtcaggcgaggtggaaagcattgacgactactga
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integrated database retrieval system
