KEGG   Caretta caretta (Loggerhead turtle): 125628594
Entry
125628594         CDS       T09292                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccay03400]
    125628594 (PER1)
DNA repair and recombination proteins [BR:ccay03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125628594 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS Diguanyl_cycl_sensor BRX_N
Other DBs
NCBI-GeneID: 125628594
NCBI-ProteinID: XP_048689645
LinkDB
Position
28:2715536..2736740
AA seq 1269 aa
MHPGALGRQEEQAGRGGVCSTKVTRDSPLSLYSLRLLRPDSSPAPIPAPPRGPGDVPGSS
PIMSASCEPGQTPFEGASVIGANSGAPRRTRAQRGAEPQGRATDDMDANSNGSSGNESHG
RDSLRSDCSSSGNGKDSALLETTESSKSTNSQSPSPPTSSIAYSLLSTSSEQDNPSTSGC
SSEQSARVKTQKELMKALKEMKIRLPSEKRGKGQSGTLATLQYALSCVKRVQASHDYYQQ
WTLDESQPCHLDVASYTVAELEGMTSEYTRKNPDTFAVAVSFVTGKILYISDQAALVLHC
KREVFKGATFAEFLAPQDVSIFYASTAPYHLPSWSACTSATAAAVGYTQEKSVFCRISGG
RARGRELSYSPFRLTPYLAKVRPSDSAEGQPCCLLVAELIHSGYEAPRIPTDKRIFTTRH
TPSCLFQDVDERAAPLLGYLPQDLIGTPVLFYLHPEDRPLMLAIHKKILQYGGQPFDHSP
LRFCTRNGEYVTIDTSWSSFVNPWSRKVSFVMGRHKVRTGPLNEDVFTAPKALKMRPLEP
DVQELSEQIRRLLLQPVHSNGSVGLCSLASNASHEQFLSAASSSDSNGLPAEETQAQRPM
TFQQFCKDVHMVKNQGQQVFIESRAKLPAAKPPHAGPGTPQDGGGPGREAPCEVQRGPGH
VVASEESGRKEASSYSYQQINCLDGIIRYLESCNIPSRVKRKCGSSSYTGSSNSDDDKQR
AGREPASSAKDAAEEMQPSQPRREEEEPAAAVGPPLAPLALPSKAESVVSVTSQCSFSST
IVHVGDKKAPESDTAMLEEGPGAAPAPDREQYRRVGLTKEVLSVHTQQEELAFLTRFQEL
SQLHVFDSPAGQGAEPGHRGPRRGAGRRGKSKAKRVKQHKASDSTGSSPPPGPWSTAAPP
CPFPTVVPVFPPSQPPTEPPPHFPAPLVAPVVALMLPNYVLPPPYFPAPFGGEPFGPPEA
SRSTTPERPHSPPFDSRCSSPLQLNLLQMEEAPKAAERQEAPGGQPGPGSGGAGGPPGAG
ELGPQKETCLVEAQDSNNDALSSSSDLLDLLLQEDSRSGTGSAASGSGSMGSGSGSGAGS
TSACGTTSSKSSHTSKYFGSIDSSEPERAGQPPGGGVGGAGEQFVKYVLQDPLWLLMANT
DEKVMMTYQLPARPTAAVLQADREKLREMQKHQPRFTEEQKKELAAVHPWVKKGLLPKAI
NVTACLDCGSHPAPRLAPLFDTESHAMELSATLEPMEEGSSAPPCPDTAMEEEEAGQPAQ
PQAGTENAG
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgcaccctggagccctgggcaggcaggaggaacaggctggccgtggtggggtttgcagc
accaaagtcaccagagactcaccgctgtcactgtacagcctacgacttctccgaccggat
tcgtctcctgccccgatccctgctcctccccgcgggccgggtgatgtccccgggtcctcc
ccgatcatgagtgccagctgcgagccgggccagacgcccttcgagggggcaagcgtgatt
ggggccaactccggagccccccggcggacccgggcccagcgaggggctgagccccagggc
cgggccaccgacgacatggacgccaacagcaacgggtccagcggcaacgagtcgcacggc
cgggactccctgcggagcgactgcagcagcagcgggaacggcaaggactcggccctgctg
gagaccaccgagagcagcaagagcaccaactcccagagcccatcgccccccaccagctcc
atcgcctacagcttgctgagcaccagctccgagcaggacaacccctccaccagcggctgc
agcagcgagcagtccgcgcgggtgaagacccagaaggagctgatgaaggcgctgaaggag
atgaagatccggctgccctcggagaaacgcggcaagggccagtcgggcaccttggccacc
ctgcagtacgcgctgtcctgcgtcaaacgggtccaagccagccacgactactaccagcag
tggaccctcgacgagagccagccctgccacctggatgtggccagttacaccgttgccgag
ctggagggcatgacctctgagtacacccgcaagaaccccgacacgttcgccgtggccgtc
tcctttgtcaccggcaagatcctgtacatctcggaccaggcggccctcgtcctgcattgc
aagagggaggtcttcaagggggccaccttcgccgagttcctggccccccaggacgtcagc
atcttctacgcctccaccgctccctaccacctgccctcctggagcgcctgcacctcagcc
actgcggccgccgtgggctacacccaagagaaatcggtcttctgccggatcagcggaggc
cgcgcccgtgggcgggagctgtcttactcccccttccggctcaccccctacctggccaag
gtgcgcccctcggacagcgccgagggccagccctgctgcctgctcgtcgccgagctcatc
cactcgggatacgaagctccccggatcccgaccgataagcggatcttcaccaccaggcac
acccccagctgcttgttccaggacgtggacgagagggctgcccccttgctgggttacctc
ccccaggacctgattggcacgcccgtcctcttctacctgcacccggaggacaggccgctc
atgctggccatccacaaaaaaattctccagtacggcgggcagcccttcgaccactccccg
ctccgtttctgcacccgcaacggcgagtacgtcaccatcgacaccagctggtccagcttc
gtcaacccctggagccgcaaggtctccttcgtcatggggcgccacaaagtgcgcacgggt
cccctcaacgaagacgtcttcacggcccccaaggcgctcaagatgcggccgctggagcct
gacgtccaggagctctcagagcagatccgccggctgctcctccagcctgtgcacagcaat
ggctccgtggggctctgcagcttggccagcaacgcgtcccacgagcagttcctgagcgcg
gcctcctccagcgacagcaacggcctccccgccgaggagacgcaggcccagcggccgatg
accttccagcagttctgcaaggacgtgcacatggtgaagaaccagggccagcaggtgttc
atcgagtcccgcgccaagctgccggctgccaagcccccccacgcaggcccggggacaccc
caggatggtggcgggccgggcagggaggccccttgtgaggtgcagcggggcccgggccac
gtggtggcttccgaggagtcgggcaggaaggaggcctccagttactcctaccagcaaatc
aactgcctggacgggatcatcagatatctggaaagctgcaacatccccagccgggtgaag
cggaaatgcggctcttcgtcctacaccggctcctccaactccgacgacgacaaacagagg
gcaggcagggagccagccagctcggcaaaagatgcggcggaggaaatgcagccgagccag
cccaggagggaggaggaggaacccgccgcggcggtgggacccccgctggccccgctggcc
ttgcccagcaaagccgaaagcgtggtgtccgtcaccagtcagtgtagcttcagcagtacc
atcgtccacgtgggagataagaaagccccggaatcggacacagcgatgctggaggagggc
cccggggccgcgcccgcccccgaccgggagcagtaccgccgtgtggggctcaccaaggag
gtgctgtccgtccacacccagcaggaggagctggctttcctcacccgcttccaggagctg
agccagctccacgtcttcgactcgccagccgggcagggcgccgagccagggcaccgcggc
ccacggcggggtgccggccggcgcggcaaatccaaggccaagcgtgtcaagcagcacaag
gcatccgacagcaccggctcctcgcctccccccggcccctggtccaccgcggcccccccc
tgccctttccccaccgtggtgcccgtcttcccgcccagccagccccccactgagcccccc
ccccacttccccgcccctctggtggcccccgtggtggccctgatgctgcccaactacgtc
ctgcccccgccgtacttcccggcccccttcgggggggagcccttcggcccccctgaggcc
tcgcgctccaccacgcctgagcggccccactcgccccctttcgactcccgctgcagctcc
ccgctccagctcaacctgctgcagatggaggaggcccccaaggcggccgagcggcaggag
gcgccaggtggccagcctgggccgggaagcggtggggccggcgggccgccgggggccggc
gagctcggcccacagaaggaaacctgcctggtggaagctcaagactccaacaacgacgcc
ctgtccagctccagcgacctgctggacctgttgctgcaggaggactcgcgctccgggacc
ggctcagccgcctcgggcagcggctccatgggctccggctccggctccggggcgggcagc
acctcagcctgcggcaccaccagcagtaagagcagccacaccagcaagtacttcggcagc
atcgactcgtcggagccggagcgggcggggcagccgccgggcgggggcgtgggcggggct
ggcgagcagttcgtcaagtacgtgctgcaggaccccctttggctgctcatggccaacacg
gacgagaaggtgatgatgacctaccagctgcctgcccgccccacggccgccgtgctccag
gccgaccgggagaagctgcgggagatgcagaagcaccagccgcgcttcaccgaggagcag
aagaaggagctggccgcggtgcacccttgggtgaagaaggggctgctgccgaaggccatc
aacgtcacggcctgcctggactgtggcagtcacccagccccccgcctggcacccctcttc
gacacggagtcgcatgccatggagctgagcgccacgctggagcccatggaggagggcagc
agcgcccccccctgcccggacacggccatggaggaggaggaggccgggcagccagcccag
ccccaggcgggcaccgaaaatgctggctga

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