Caretta caretta (Loggerhead turtle): 125629045
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Entry
125629045 CDS
T09292
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125629045 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125629045 (CHD8)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125629045 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125629045
NCBI-ProteinID:
XP_048690257
LinkDB
All DBs
Position
Unknown
AA seq
2424 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDEGFAQAPPDPIEEALGLPGALDPSQPTPPPATEPAQPE
TLPGQPNPTPVSPQPDPPQPGLPQEQEVLSQGNPFMGVSSASSAMVSSSSVVGQQLPQAA
APLPAPKIVILKAPAGGSVTGAHVAQIQAQPQPLGAANGGKVTFAKVLTGTPLRPGVSIV
SSNAVLATKVSASGGPTTVHRLVQPGRPVKQLVLQPVKSPPGGMGAAGGTPLKPAVTLTS
APAQGESKRITLVLQQPQGGSGPPGQRHVVLGNLPGKIVLQGNQLAALSQAKGVPGQPAK
VVTIQLQVQQPPGGQPGGPHKIQLLQQPPAAGASGQQPPLAVSSVQQAQVVGGPGQRLTV
PLKVVLQPQAGSSQSGSPGLSVVKVLSSSEVAALSGHGTRSGSEETRKLEHQKKQEKANR
IVAEAIARARARGEQNIPRVLNEDELPSVRPEEEGERKRRRKGERGGPKEERPRKGRGQG
GSGKSKGRSKPSTITPVVGKKRKRNASSDNSDTEAIPAPSPREEEESSVQKRRSNRQVKR
KKYTEDLDIKITDDEEDEELDVTGPVRPEQPPVPQPPAPEPEGETLPSMQFFVENPSEED
AAIVDKVLSMRVVKKELPSGQFTEAEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKR
FKTKMTQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDST
WELKEDVDEGKVREFKRIQARHPDLKRVARPQAISWKKLELSHEYKNRNQLREYQLEGVN
WLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPLSTITNWEREFNT
WTEMNSIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREI
EWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFP
SEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKY
YRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILAEFRDSCPHYV
PHDLHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERI
DGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGSIAGIQQFS
KKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVA
SENRTDIALDDPNFWQKWAKKADLDLDQLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEF
SDLESEDEERPRSRRHDRHHPLHHSYGRTDCFRVEKHLLVYGWGRWREILSHGRFKRRLS
ERDVETICRAILVYCLLHYRGDENIKGFIWDLISPVENGKAKELQNHSGLSIPVPRGRKG
KKVKSQSTFDVHKAEWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQ
ASKVLAGAGASEINIWFPLVEQLEVPTGWWDAEADKSLLIGVFKHGYEKYNTMRADPALC
FLEKAGRPDDKAIAAEHRLDVGEGAEFDKDCEDPEYKPLSGPAKEQDDEGDPLMLLDEEI
SVVDGDEGQPAQPGHLFWPPGSVLTARLRRLITACQRSYKQEQLKMEAAERGDRRRRRCE
AACKLKEMVRREKQQRWTRREQSDFYRVVSSFGVEYDPDTLHFHWGRFRALARLDRKTDE
SLTKYFHGFVAMCRQVCRLPPAASDESPDPTLFIEPISEERASRTLYRVDLLRRLREQVL
CHPLLQERLALCQPPGPELPTWWECGRHDGELLQGAARHGLSQTDDTIMQDPDFSFLAAR
LSYLHGRAGTPQPPAGGAGAATTSPLSPTPEMPAPLLPVLLSKPDSADDSDSELDLGKLS
PSTSGSSSSCSEDSDDERGTMPCRGKLSEEEEESLLSLPTSQEGDSPQPTAPELLLQERQ
RAHEWPKDRVLINRIDLVCQAVLSGKWPSSQRTQEPCGGPGGDVAPRLPGDYASSPAPHA
CPQEEAPALYTRLRHSPEEKEFTVQIKDEEGIKLTFQKHKLIPNGALHERHPHPLGHKKS
SKKLVELELQCLEGLRGPDIDLEARIPVVHKANGTLLVGEAAPRRADLEAWLHAHPDFAI
DPRFLAYMEDRRKWHRCKKTGTVELSCLPGLERGPGASGSHNGKKGFVTDPVMSRLLPGP
LESEGGLKQPRGRRAGVELSKMVSLMGGAGRSQLGAIGPLSLHGPFQPGPTPGSSLPYIP
FPTASSSGSLLHPGLGHGSYPPGPHMHLGSLGHPQPDEEEEDEEDELDDLSQGYASSEQD
FSLLDDPMMPANSDSSDGANDGGD
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggacctgttcgacgaccccaaccttttcgggttggactccctg
acggacgaaggctttgcccaagcaccgcccgaccccatcgaagaggcgctgggactgccg
ggggcactggacccctcccagccaacgccgccccctgccacagagcctgcccagccagag
acgctgccggggcagccgaatcccacgcctgtctccccgcagccagaccctccgcagcca
ggactcccccaggagcaggaggtgctgagccaggggaacccctttatgggcgtgtccagt
gccagcagtgccatggtgtcgtcctcctccgttgtggggcagcagctgccgcaggctgca
gccccgctgccagcccccaagattgtcatcctgaaggccccagcaggcggctccgtgacg
ggggcccacgtggctcagatccaggcccagccccagccactgggggcagccaacgggggc
aaggtgacctttgccaaggtactgacaggcaccccactgcgccctggcgtctccatcgtc
tccagcaatgctgtgctggccaccaaggtgtccgcctcgggcggccccaccactgtgcac
cggctggtccagcccggccggcccgtcaagcagctggtgttgcagccagtgaaaagcccg
ccggggggcatgggggctgcaggtggaacacccctgaaacctgctgtcaccctgacatcc
gcccctgctcagggtgagtcgaagcgcatcactctggtgctccagcagccgcaggggggc
agtggccccccagggcagcgccacgtggtgctgggcaacctgccggggaagatcgtgctg
cagggcaaccagctggcggccctgagccaggccaagggggtgccgggccagccggccaag
gtggtgaccatccagctgcaggtgcagcagcccccagggggtcagcctggggggcctcac
aagatccagctgctgcagcagcccccggcggcaggtgcctcaggacagcagccccccctg
gcggtctcctccgttcagcaggcccaggtggtgggtggcccggggcagaggctgacggtg
ccgctcaaggttgtgctgcagccacaggctggctcatcccagagtggctcacctgggctt
tccgtggtgaaggtgctgagcagcagcgaggtggcggcactgtccggccatggcacacgc
agtggctcagaggagacccgcaagctggagcaccagaagaagcaggagaaggcgaaccgc
atcgtggcggaagccattgcccgggcgcgggcccgcggcgagcagaacatcccccgcgtg
ctgaatgaggatgagctgcctagtgtgcggcccgaggaggagggtgaacgcaagcggcgc
cgcaagggcgagcgtggggggcccaaggaggagaggccccgcaagggccggggccagggg
ggctctggcaaaagcaaggggcgcagcaagcccagcaccatcacccccgtagtggggaaa
aaacggaagcggaacgcctcctccgataactctgacactgaggccattccagctccatcc
ccccgcgaggaggaggagagcagcgttcagaagcgtcgctccaaccggcaggtgaagcgg
aagaaatacaccgaggatctggacatcaagatcacggacgacgaggaggatgaggagctg
gacgtgacagggccagtgcggcctgagcagcctcccgtgccgcagccccctgcccctgag
ccggagggagagaccctgccctccatgcagttcttcgtggagaaccccagtgaggaggat
gccgccattgtagacaaggtgctgtccatgcgggtggtgaagaaggagctcccctcaggg
cagttcactgaagcagaggaattcttcgtcaaatacaaaaactactcgtatctgcactgc
gaatgggccaccattgcccagctggagaaggacaagcgaatccaccagaaactcaagcgc
ttcaagaccaagatgacccagatgaggcacttcttccatgaggatgaggagccttttaac
cctgactatgtggaggtcgaccggatcctggatgagtcccacagtgtcgataaggacaac
ggagagccggtgatctattacctggtgaagtggtgctccctgccttatgaggacagtacc
tgggagctcaaggaggatgtggatgaggggaaagtccgtgagttcaaacgcatccaggcc
cggcaccctgatctcaaacgcgtggcccgcccccaggccatctcctggaaaaaactggag
ctctcccacgagtacaagaaccgcaaccagctgcgcgagtatcagctggagggggtcaac
tggctgctcttcaactggtacaacaggcagaactgtatcctggcagatgagatggggctg
gggaagaccatccagtcgatcgccttcctacaggaagtttacaacgtgggcatccgaggc
ccgttcctggtcatcgctcccctctccaccatcaccaactgggagcgcgagttcaacacg
tggaccgagatgaacagcatcgtctaccacggcagcttggcctcccgccagatgatccaa
cagtacgagatgtactgcaaggactcccggggccggctgatccctggcgcctacaagttc
gacgcgctcatcaccacttttgagatgatcctgtcagactgccccgagctgcgggagatt
gagtggcgctgcgtcatcatcgacgaggcccaccggctcaagaaccgcaactgcaagctg
ctggacagcctcaagcacatggacctggagcacaaggtgctgctgacgggcaccccgctg
cagaacacagtagaggagctgttcagcctgctgcacttcctggagccctcgcagttcccc
tccgaggccgagttcctcaaggacttcggggacctcaagacagaggagcaggtgcagaag
ctccaggccatcctgaagcccatgatgctgcggcggctgaaagaggatgtggagaagaac
ctggcgcccaagcaggagaccatcatcgaggtggagctgaccaacatccagaagaaatac
taccgggccatcctggagaagaacttctccttcctgtccaagggggcggggcacaccaac
atgcctaacctgctcaacaccatgatggagctccgcaagtgctgcaaccacccctacctc
atcaacggcgcggaagagaagatcctggctgagtttcgggactcttgcccgcactacgtg
ccccatgatctgcacctccaggccatggtgcgctcggccggcaagctggtgctcattgac
aagctgctgcccaagcttaaggcgggcggccacaaggtgctgatcttctcgcagatggtg
cgctgcctcgacatcttggaggactacctcatccagaggcggtacctgtatgagcggatt
gacggacgggtgcgggggaacctgcggcaggctgccattgaccgctttagcaagcctgac
tcggaccgctttgtcttcctactctgcactcgggcgggcggcctgggcatcaacctcacg
gcagccgacacctgcatcatcttcgactcagactggaacccccagaacgacctgcaggcg
caggcccgctgccaccggatcgggcagagcaaggcggtgaaggtctatcgcctcatcacc
cgcaactcctatgagcgcgagatgttcgacaaggccagcctcaagctgggcctggacaag
gccgtgctgcagtccatgagtgggcgcgagggcagcatcgctgggatccagcagttctcc
aagaaggagattgaggacctgctgcgcaagggggcctatgctgccatcatggaggaggac
gatgagggctccaagttctgcgaggaggatattgaccagatcctgctgcgccgtacgacc
accatcaccattgagagtgagggcaagggctccactttcgctaaggcgagcttcgtggcc
tcagagaaccgcacagatatcgccctggacgaccccaacttctggcagaaatgggccaag
aaagcagacctggacctggaccagctcaacagcaagaataacctggtgatcgacacgccg
cgggtgcggaagcagacccggcacttcagcaccctgaaggacgatgacctggtggagttc
tcggacctggagagcgaggatgaggagcggccgcgctccaggcgtcatgaccgccaccac
cccctgcaccactcttacgggcgcaccgactgcttccgcgtggagaagcacctgctggtc
tacggctggggccgctggcgggagatcctgtcccatgggcggttcaagcggcgcctgtcg
gagcgggacgtggagacaatctgccgtgccatcctggtctactgcctgctgcactaccga
ggcgacgagaacatcaagggtttcatctgggacctgatcagccccgttgagaacggcaag
gccaaggagctgcagaaccactcgggcttgtcgatccccgtgccacgggggcgcaagggc
aagaaggtgaagtcccagagcacgttcgatgtccacaaagccgagtggatccgcaagtac
aaccccgacacactctttcaggacgagagctacaagaagcacctcaagcaccagtgcaac
aaggtgttgctgcgagtgcggatgctgtactacctgcgccaggaggtgatcggggaccag
gccagcaaggtgctggctggtgctggtgcgagcgagatcaacatctggttcccactggtg
gagcagctggaggtgccaaccggctggtgggacgctgaggccgacaagtccctgctcatt
ggggtcttcaagcatggctatgagaaatacaacaccatgcgagctgaccccgccctctgc
ttcctggagaaggctgggcgccccgatgacaaggccattgctgcggagcaccgcctggat
gtgggggagggggcggagtttgacaaagactgcgaggaccctgaatacaaaccgctgtct
gggccagccaaggagcaggatgacgagggcgatcccctgatgctgctggatgaggagatc
tcggtggtggatggggatgaaggccagccggcccagcctgggcacctgttctggccacca
ggctcggtgctcacagcccgcctgcggcgcctcatcactgcctgccagcgcagctacaag
caggagcagctgaagatggaggctgcagagcgtggggaccggcggcgccgtcgctgcgag
gcagcctgcaagctcaaggagatggtgcgccgggagaagcagcagcggtggacgcgtcgg
gagcagtctgatttctaccgcgtggtgtccagtttcggggtggagtacgaccctgacacg
ctgcacttccactggggccgctttcgggcgctggcccggctcgaccgcaagacagacgaa
agcctcaccaagtatttccatgggtttgtggccatgtgccggcaggtgtgccggctgccc
ccagccgccagcgatgagtccccagaccccacgctgttcattgagcccatctcagaggag
cgggcctccaggacgttgtatcgcgtggacctgctgcgccggctgcgggagcaggtcctg
tgccacccgctgctgcaggagcgcctggccctgtgccagccaccgggccctgagctgccc
acctggtgggagtgcgggcggcacgacggggagctgctacagggggcggcacgccatggg
ctgagccagactgacgacaccattatgcaggaccccgacttctccttcctggctgcccgc
ctcagctacctgcatggccgggccgggacacctcaaccccctgcagggggtgctggagcc
gctaccacctcccccctgtctcccacgcccgagatgccggccccgctgctgcctgtgctt
ctctccaagccggactcggctgacgactcggactcggagctcgacctggggaagctctcg
ccctccacgtccgggtcgtcatcgtcctgctctgaggacagcgatgacgagaggggcacc
atgccatgcagggggaagctgtccgaggaggaggaggagtccctgctctccctgcccacc
tcccaagagggtgactctccacagcccactgccccggagctgctgctacaggagcggcag
cgtgcccacgagtggcccaaggaccgggtgcttattaaccgcatcgacctggtgtgccag
gctgtgctgtcagggaagtggccctcaagtcagcgcacccaggagccctgtgggggcccg
gggggagacgttgccccgcggctgccaggtgactatgccagctcgcctgctccccatgcc
tgcccccaggaggaagcaccagccctgtacactcggctccggcacagccccgaggagaag
gagttcactgtgcagatcaaagacgaggaggggatcaagttgacgttccagaagcataag
ctgatccccaatggcgctctacatgagcggcacccacacccgctgggccacaagaagagc
agcaagaagctggtggagctggagctgcagtgcttggaagggctgcggggccctgacatt
gatctggaggcacggatcccagtggtgcacaaggcgaatgggacattgctggtgggggag
gcggccccacgccgagctgatctggaggcctggctgcatgcacaccctgactttgccatt
gacccccgcttcctggcttacatggaggatcggcgcaagtggcaccggtgtaaaaagacc
ggcacagtggagctgagctgcctgccagggttggagcggggcccgggggccagtggctcc
cacaatggcaagaagggcttcgtgactgaccctgtgatgagccggctgttgccaggtccg
ttggaatctgaggggggcctgaaacagccacggggtcgccgggctggtgtggagctgtcc
aagatggtatccctgatgggcggggccgggcggagccagctaggggctatagggcccctg
tctttacacggccccttccaacctggaccaacccctggctcttcccttccctacataccc
ttccctacagcctcctcctctggctccctgctgcacccggggttgggccacggcagctat
cccccaggcccacacatgcacctgggctccctggggcacccgcagcctgatgaggaagaa
gaggatgaggaggatgagctggatgacttgtctcagggctacgccagttcagaacaggac
ttctctctgctcgatgaccctatgatgccggccaactcggactccagtgatggtgctaat
gatggaggcgactga
DBGET
integrated database retrieval system
