Caretta caretta (Loggerhead turtle): 125629214
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Entry
125629214 CDS
T09292
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125629214 (CACNA1I)
04020 Calcium signaling pathway
125629214 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125629214 (CACNA1I)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125629214 (CACNA1I)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125629214
NCBI-ProteinID:
XP_048690572
LinkDB
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Position
1:253311073..253436762
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AA seq
2043 aa
AA seq
DB search
MMVILLNCVTLGMYQPCDDMDCLNDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCY
LGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFMEENFTIQGDIILPPYYQPEEDDEM
PFICSLSGDNGIMGCHEIPPLKERGHECCLDKDDYYYYNSVRQEFNVSGMCVNWNQYYNV
CRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQREHQLMQEQRARYLSSSTVASYTEPGDCYEEIFQYVCHI
VRKAKRRTLSLYNSLQDRRQGRMESGCAKLGVNGKGQRRYRHCRKHNSLEYTPHALVQPI
AMTLTSDPNNCPRCHRVQHEAARRLSILDSADSDQEEGGAGKEQGEGRRGSKGATDLEKE
EEEGEEGGWLRLCSDLWREVRVKLRGIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELT
NILEISNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQSDGGLSV
LRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFS
LRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFG
NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNMEDFDKFQDSQDVSDPRLCAIPMTP
NGHLDPSLPSSNQPVAAGGVTSSARNSLQPDQILIALGSRKSSVMSLGRMTYDQRSLSSS
RSSHYGAWGRSGAWGSRRSSWNSLARGHSLKHKPPSAEHESLLSVERHRVADGEREGMGR
APHHRRTLSLDIKDSCDLVELTSSVPSSHRAARKVGVALGTSEHQDCNGKMPNIAKEIFP
KMDDRKEHGEDEEEIDYSLCFRIRKMMDVYKPDWCEIREDWSIYLFSPQNRFRILCQTII
AHKLFDYVVLAFIFLNCITIALERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLG
LYFGEQAYLRSSWNILDGFLVFVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVIS
RAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGIDIRNITNRS
DCMAANYKWVHQKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWM
LLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRL
PYYATYCSVRLLIHSVCTSHYLDIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYMFT
TVFVLEAVLKLVAFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCN
DENPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDDRSCLSNLQFISP
LYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLCPRTVGSPS
SGQGAGGGGGGRVDPEGRLCMRCFSPAQVQLAEMEGLSLNSDKSSSILLGDDLDNRSICQ
LSSKETKNGQNSPDSMGMGDLGECFFPLTTTGASPTPEGYLCEMEKIPFNPVQSWLKHES
NQVPPGPFSPGTSRPLLPVPAEFFHPAISATQTGQEKVSCPGSLPKISLQGSWASLRSPS
VNCSLLHQATESDTSLDDSRSSSSEGSLQTTLEDSLNLSDSPQCTLDLPMALCPMPTAAS
QRTMAAPLSPASRRRNLRGRGIFSLQSIRRHQRSHSSGGSTSPGCTHHDSMDPSDEEGAG
SSLRGGNNSEQSETLSSLSLTSLFSPPPPPPGRALVKKCNSTSSLTANPSSRGPTTNEAK
PFYSVDPRGFLSMPSWVTDFCKDTPSPGDGEGSDSPDKLGVADRSSPLPSELELGNGVSK
RNR
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgattctgctgaactgtgttaccctggggatgtaccagccttgtgatgatatg
gactgtctcaatgaccggtgcaagatcttgcaggtatttgatgatttcatcttcatcttc
tttgccatggagatggtgctgaagatggtggcccttgggatctttggcaagaagtgttac
cttggagacacctggaaccgcctggatttcttcattgtgatggctgggatggtggaatat
tccctggacctgcaaaacattaacttgtctgcaatccgtactgtccgtgtcctgaggccc
ctcaaagccatcaaccgggtgcctagcatgcggatcctggtgaatttgctcctggacacc
ctgcccatgctggggaatgttctgcttctctgcttctttgtcttcttcatctttggcatc
atcggagtacagctgtgggctggtctgctcaggaaccgctgtttcatggaggagaacttc
acaatacaaggcgacatcattctccccccctattaccaacccgaggaggacgatgagatg
cccttcatctgctcgctgtcaggagacaatggcatcatggggtgtcatgagatccccccg
ctgaaggagaggggccatgagtgctgcctggacaaggatgactattattactacaactct
gtccggcaggagttcaatgtcagtggcatgtgcgtcaactggaaccagtactacaacgtg
tgccgcacaggcaatgccaacccacataagggtgccatcaactttgacaatatcggttat
gcctggatcgttatatttcaggtgatcacactggaagggtgggtggagatcatgtattat
gtgatggatgctcattcgttctacaactttatctactttatcttgctgataatcgtgggc
tctttcttcatgatcaacctgtgcctggtggtcatagctactcagttctctgagaccaag
cagcgggagcaccagctgatgcaggaacagcgagcacggtacttgtcctccagcactgta
gccagctacacagaaccaggagactgctacgaggagatcttccagtacgtttgccacatc
gtgcgcaaagccaagcgtcgcacacttagcctctacaacagcctgcaggaccgacgccag
ggccggatggagtcaggctgtgccaagctcggtgtgaacgggaaaggacagagacgctat
aggcattgccggaaacacaactctctcgaatacactcctcatgccctcgtccagcccatt
gctatgaccctgacctctgaccccaacaactgccccagatgtcacagggtgcagcatgag
gcagcccggaggctctccatcctggacagtgctgattcggaccaggaggaaggaggggct
ggcaaagagcaaggagaaggaagaagaggaagcaagggtgccacagatctggagaaggag
gaagaggagggggaagagggcggatggctgaggctctgtagtgacctgtggcgagaagtg
agggtcaaactaagggggattgtggacagcaagtacttcaaccgtgggatcatgatagcc
atcctagtaaacaccatcagcatgggcattgagcaccatgaacagccagaagaactgacc
aacatcttggagatcagcaatgttgtgttcaccagcatgtttgccctggagatgatcctg
aaactcgccgcctttggcctctttgattacctccgcaatccctacaacatcttcgacagc
atcattgtcatcatcagcatatgggagatcattggccagtcagatggggggctgtcagtg
ctgagaactttccgcctcctgcgggtgctgaagctcgtacgtttcatgcctgctctgcga
cgccagctggtggtcctgatgaagaccatggacaatgtggccaccttctgtatgctcctt
atgctcttcatctttatcttcagcatcctgggaatgcacatctttgggtgcaaattcagc
ctccggacagacaccggagacacagtccctgaccggaagaactttgattcgctgctctgg
gccatcgtcactgtgttccagatcctgacccaggaggactggaacgtcgtgctgtataat
ggcatggcctccacctcaccgtgggcatccctttactttgtggccctcatgacctttggc
aactatgtcctcttcaatctgctggtggctatcctggtggagggcttccaggctgagggt
gatgccaaccggtcgtactcagacgaagatcagagttcatcaaacatggaggactttgac
aagttccaggacagccaggatgtctcagatcccaggctctgtgcaattcccatgacccca
aatggacaccttgaccccagcctaccttcttccaaccagccagtggcagctggtggggtc
acaagttctgcccggaattccctgcagccagaccagatcctcattgccttgggttccagg
aagagcagtgtgatgtcactggggagaatgacctacgaccagaggtcactgtctagctct
cgcagttctcactatggtgcatggggccgcagcggggcctgggggagccgccgctccagc
tggaacagcctggctcggggacacagcctaaaacacaaacctccatctgccgagcatgaa
tctctgctgtctgtggaaaggcacagggtggcggatggagaacgagaggggatgggaagg
gcccctcatcaccggcggacgctctcgctggacatcaaagattcctgtgacctggtggag
ctgacgtcatcagtcccatccagtcacagggcagcacggaaggtgggtgtggctctgggc
accagcgagcaccaggactgtaacggcaaaatgcccaatatcgctaaggagattttccca
aagatggacgaccgcaaggaacatggagaggacgaggaggagatagactatagcctgtgt
ttccgcatccggaagatgatggacgtatataagccagactggtgtgagatacgggaggat
tggtccatctacctcttctctccacaaaacaggttccgcatcctctgccaaaccatcatt
gctcacaagctctttgactatgttgttctggccttcatcttcctgaactgcatcaccatt
gccctggagagaccgcagatcgagcatcggagcacggagaggatctttctcaccgtatcc
aactacattttcacggcaatcttcgtagctgagatgacactaaaggtggtctctctaggc
ctatattttggggagcaggcctatctccgcagcagctggaacatcctagatggcttcttg
gtctttgtgtccctcattgacattgtggtctcagtggcctctgctggaggagctaaaatt
ctgggggtgctccgggtcctccgactgctgcgcacattacgtcctctcagggtcatcagc
cgtgccccaggcctgaagctggtggtggagacactcatctcatccctcaaacccattggg
aacattgtcctcatttgctgtgccttcttcatcatctttggcatcctgggtgtgcagctc
ttcaaggggaagttctaccactgccttgggattgacatccgtaacatcaccaacaggtct
gactgtatggccgccaattacaaatgggtacaccaaaagtacaactttgacaaccttgga
caggccctgatgtccctcttcgttctggcctccaaagatggttgggtcaatattatgtat
aacggactagatgctgtggctgttgaccagcagccagtgaccaacaacaacccctggatg
ctcctttacttcatctcattcctcctcatcgtcagcttcttcgttctcaacatgttcgtg
ggggtggtggtggagaacttccacaagtgccggcagcatcaggaggcagaggaggcacgc
cggcgggaggaaaagcgcctcaggcgcctggagaagaagcgcaggaaggcgcagcgcttg
ccgtattatgccacctactgctctgtccgcctcctcatccattcggtctgcaccagccac
tacttggacatcttcatcaccttcatcatctgcctcaacgtcgtcaccatgtccctggag
cactacaaccagccagtgtctcttgagactgccctgaagtactgcaactacatgttcacc
acagtttttgtgctggaggcggttctgaagctggtggcgtttggattgcggcgattcttc
aaagacaggtggaaccagctggacctggccattgtactgctatctgtcatgggcatcacg
ctggaggagattgaaatcaatgcagctctccccatcaaccccaccatcatccgcatcatg
agggtgctgcgcattgcccgggtgctgaagctactgaagatggcgacagggatgcgggcg
ttactggacacagttgtgcaagctctgccacaggtggggaacctcggactgctcttcatg
ctcctctttttcatctacgctgctctaggagtggaactctttgggaagctggtgtgcaat
gacgagaacccctgtgagggcatgagccgccatgccacctttgagaactttgggatggcc
ttcctcacgctcttccaggtctccactggcgacaactggaatggaatcatgaaggatacc
ctgcgggactgcacccatgatgaccggagttgcctcagcaacctgcagttcatctcgcca
ctctactttgtcagcttcgtgctcacagcccagtttgtcctcatcaacgtggtggtagct
gtgctcatgaaacacctcgacgacagcaacaaggaggcgcaggaggacgcagaaatggat
gccgagattgagctcgagatggcacacgggctctgcccccgcaccgtgggctccccgagc
tcaggacagggagcaggaggtggaggaggtgggagagtggaccctgaaggacgtctgtgc
atgagatgtttctctccagcacaggttcagctggctgaaatggaaggcttatccctcaac
tcagacaagtcttcttccatcctgctaggggatgatttagacaatcgcagcatctgtcag
ttgagttctaaggagaccaagaatggccagaacagccctgactccatgggcatgggagat
ttgggggaatgtttcttcccattaacaactacaggtgcttctccaactccagaaggttac
ttgtgtgaaatggagaaaatccctttcaaccccgtccagtcctggctgaagcatgagagt
aatcaagttccccccggacccttttctccaggtacgtccaggccactgttacctgtacca
gcagagtttttccatccagccatctctgccacccagactgggcaggagaaggtttcctgt
ccaggcagccttcctaaaatctctctgcagggttcatgggcatcactgcgatccccaagt
gtgaactgctcactactccaccaggccacggagagcgacacctccctcgatgacagcagg
agcagtagctcagaaggcagcttgcagaccaccctggaggacagcttgaaccttagcgac
tcaccccagtgcaccctggacctcccgatggcactgtgcccgatgccaacggctgccagc
caaagaaccatggcagctccactttcccctgcctcccggcggcggaacctgcggggccgc
gggatattcagcctgcagagcatcaggcggcatcagcggagccacagcagcggagggagc
acgagccctgggtgcactcatcatgactccatggacccttctgacgaggagggcgcgggg
agcagcctgaggggtggcaacaacagcgagcagtcagagaccctcagcagcctctccctg
acatcccttttctccccacccccaccgcccccaggccgggcgcttgtgaagaagtgcaac
agcacaagcagcctcaccgccaacccctcttcccgagggcccaccaccaacgaagccaag
ccgttctactcggttgacccccgggggttcctctccatgccctcctgggtgacggacttc
tgcaaggacaccccctcaccgggtgatggtgaggggtcggacagccccgataaactgggg
gtggcagaccgcagctccccactcccttctgagctggagctgggcaatggagtcagcaag
aggaacagatga
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integrated database retrieval system
