Caretta caretta (Loggerhead turtle): 125629653
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Entry
125629653 CDS
T09292
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125629653 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125629653 (TAF6)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125629653 (TAF6)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125629653 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
125629653 (TAF6)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125629653 (TAF6)
STAGA complex
125629653 (TAF6)
TFTC complex
125629653 (TAF6)
SAGA complex
125629653 (TAF6)
SLIK complex
125629653 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-18kDa
TFIID-31kDa
Histone
Motif
Other DBs
NCBI-GeneID:
125629653
NCBI-ProteinID:
XP_048690991
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAEEKKPKLSHTLLPAESMKVMAEAMGIAQVPEETCQLLADEVSYRIKEIAQDALKFMHM
GKRRKLTTGDVDYALKLKNVEPLYGFHAQEFIPFRYASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGTQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEENGALKG
KGQSAAAPDGKGKEKKAPVLEGAPLKLKRRSIHELSVEQQLYYKEITEACVGSCEAKRAE
ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL
HELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTK
SWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQVEGERVRGIVEGPVVSNIDKIGAD
HVQSLLLKHCAPVLAKVRPPPDNQDSYKADYGSLGSLLCTHVVKARAQAAMQAQQVNRTT
LTITQPRPTLTLSQAPQGPPRAPSIIKVPSSITLPVQTLVSGRPSTPTQPSPPPTKYIVM
SSASGSSTSQQVITFSSSPLGTASSPISTTAAGVQPVVKLVSTAQTAPSATVTGSLQKYI
VVSLPPPGEGGKAGGAPGTQLSPSAPPGLALPGLAPPIGTSTIKQEPGDSPQAPPGTPSP
FGKANGAQGGVAGSPQPSQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagaagccgaagctgagccacacgctgctgccggccgagtccatgaag
gtgatggcggaggccatgggcatcgcccaggtgcccgaggagacctgccagctgctggcc
gacgaggtcagctaccgcatcaaggagatcgcccaggatgccctgaagttcatgcacatg
ggcaagcgccggaagctgaccacgggggacgtggactatgccttgaaactgaagaacgtg
gagccgctgtacggcttccacgcccaggagttcatccccttccgctacgccagcgggggc
gggcgggagctgtacttctacgaggagaaggaagtggatctgagcgacatcattaacacg
cccctgccccgcgtcccgctggacgtctgcctcaaagctcactggctcagcatcgaaggc
acccagcccgccatccccgagaacccgcccccagcccccaaagagcagcagaaagcggag
gccacggagccgctgaaatccacgaagcccgggcaggaggagaacggtgccctgaagggc
aaagggcagagcgcagccgccccggatggcaaagggaaggagaagaaggcccccgtgctg
gagggggccccgctgaagctgaaacggcgaagcatccacgagctgtctgtggagcagcag
ctttattacaaggagatcacggaggcctgcgtggggtcctgcgaggccaagagagccgag
gccctgcagagcattgccaccgaccccggactctaccagatgttaccgcgcttcagtacc
ttcatctccgaaggggtgcgtgtgaatgtggtgcagaataacctggcgctgctcatctac
ttgatgcggatggtgaaggcgctgatggacaaccccaccctgtacctggagaaatacctg
cacgagctgatcccagcagtgatgacctgtatcgtgagccggcagctctgcctgcggccg
gacgtggacaatcactgggccctgcgggacttcgccgcccgcctcatcgcccagatctgc
aagaacttcagcaccaccaccaacaacatccagtcccgcatcaccaagaccttcaccaag
agctgggtggacgagaagacgccctggaccacgcggtacggctccatcgcggggctggcc
gagctgggccacgacgtgatcaagaccctgatcctgccgcggctgcaggtggagggcgag
cgggtgcgcggcatcgtggaggggccggttgtcagcaacatcgataagatcggggccgac
cacgtccagagtctgctgctgaagcactgcgccccagtgctggccaaggtccgcccgccg
cccgacaaccaggactcgtacaaggccgactacggctccctgggctccctgctctgcacc
cacgtggtgaaagcccgggcccaggcggccatgcaggcccagcaggtcaaccgcaccacc
ctcaccatcacgcagccccgcccgacgctgaccctgtcgcaggccccccagggccccccg
cgggccccgagcatcatcaaagtgcccagctccatcacgctgcccgtgcagaccctggtg
tccggccgcccctccacccccacccagccctccccgccccccaccaagtacattgtcatg
tcctccgcctccggcagcagcacctcccagcaggtgatcaccttcagcagcagccccctg
ggcacggccagctcccccatcagcaccacggcggccggggtgcagcccgtggtgaagctg
gtctccacggcccagacggcgcccagcgccacggtgacgggcagcctgcagaagtacatc
gtggtctcgctgccgcccccgggtgaggggggcaaagccggaggggcccctgggacccag
ctctccccctcagccccaccggggctggcgctgcccggcctggcgccccccattggcacc
tccaccatcaagcaggagcccggtgacagcccccaagccccgcccggcacccccagcccc
ttcggcaaggccaatggggcgcaggggggcgtggccgggtcgcctcagccctcccagtga
DBGET
integrated database retrieval system
