Caretta caretta (Loggerhead turtle): 125629971
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Entry
125629971 CDS
T09292
Symbol
GRIN2B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04020
Calcium signaling pathway
ccay04080
Neuroactive ligand-receptor interaction
ccay04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125629971 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125629971 (GRIN2B)
04082 Neuroactive ligand signaling
125629971 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125629971 (GRIN2B)
Ion channels [BR:
ccay04040
]
Ligand-gated channels
Glutamate (ionotropic)
125629971 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125629971
NCBI-ProteinID:
XP_048691309
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All DBs
Position
1:257660760..257937390
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AA seq
1500 aa
AA seq
DB search
MRPRAECYSPKFWLVLAVLATTGGGARAQKSHPSIGVAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKVQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYAYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKDKSLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VESVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYVKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFIGVCSGKPGMVFSISRGIYSCIHGVAIEEHQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSASSIDGLYDCDNPPFSAQPRSI
AKKPLDIGLPPSKHSQLGDLYGKFSFKNDRYSGGGGHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRTKENSPHWEHVDLTDIYKERGDEFKRDAVGGGGSCTNRAHHKHGSADFGGANDHKHG
VVSGVPAPWEKNLTNLDWEDRPGANFCRSCPSKLHNYTPAVVGQNSTRQPCIRCEACKKA
GNLYDISEDNSLQELDQPSAPVPVTTSATSSKYPQSPSNSASKVQKKNRNKLRRQHSYDT
FVDLQKDESALAPRSVSLKDKGRFLEGSPYAHMFDMSSSETAFANNKSSVPATSHHHHNN
PGSSSYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFRAIV
TTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKTPRAFNGSSNGHVYEKLSSIESDV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggcggagtgttattctccaaagttttggctggtgctggcagtcctagca
acgacgggtggtggggcccgtgcccagaagagccaccccagtatcggcgttgctgtcatc
ctggtggggacctcagacgaagtggccatcaaggacgcccacgagaaagatgacttccac
cacctctcagtggtgccccgagtggaactggtggccatgaatgagacagatcccaagagc
atcatcacccgcatctgcgacctcatgtcagaccggaaggttcaaggtgtggtgtttgct
gatgacacagaccaggaagccattgctcagatcctggacttcatttctgcccagactctc
acgcccatccttggcatccacggaggctcctccatgatcatggcagacaaggatgagtca
tccatgttcttccagtttggcccatcaatagaacagcaagcctctgtcatgctcaacatc
atggaagaatatgactggtacatattctccattgtcactacctacttccctggctaccag
gactttgtcaacaagatccgcagcaccatcgagaacagctttgtaggctgggagctggag
gaggtcctcttgctggacatgtccctagatgatggagactcaaagatccagaaccagctc
aagaagctccagagccctgtcatactcctctactgcaccaaggaagaggccacctacatc
tttgaggtggccaactctgtgggtctgacaggctatgcttacacatggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatctgagttccccactggcctcatctctgtg
tcttatgatgaatgggactatggccttcctgccagggtgagggatgggatagccataatc
accacagctgcttctgacatgttgtctgagcacagcttcatcccggagcccaagagcagc
tgttacaacacccaggagaaacggatctaccagtccaacatgctgaacaggtacctgatt
aatgtcacctttgaagggaggaatttgtccttcagtgaggacggctaccagatgcatccc
aagctggtgatcatccttctaaccaaggagaggaaatgggagagggtggggaaatggaag
gacaagagcctccagatgaagtattatgtgtggccccgctttgagctgtaccctgattct
gaggagcgtgaggatgaccatctgagtattgtgaccctagaggaggcgccgttcgttatt
gtggagagtgtggacccactaagtggcacctgcatgaggaatacggtcccctgccaaaag
cgcatcgtgaccgagaacaagacggacgaggagcctgattacgtcaagaaatgctgcaag
gggttctgcattgacatcctcaagaaaatctccaagtctgtcaaattcacctatgacctc
tacctggtgaccaatggcaagcatgggaagaagatcaatgggacgtggaatggaatgatt
ggggaggtggtcaccaagcgggcctacatggcggtgggatccctcaccataaatgaggag
cgttcagaggtggtggacttctctgtgcccttcatcgagacaggaattagtgtcatggta
tcacgtagcaacgggactgtctcaccttctgccttcctagaaccattcagtgctgacgta
tgggtgatgatgtttgtaatgctgctcataatctctgcagtggctgtcttcgtctttgag
tacttcagccctgtgggttacaatcggtgccttgctgatggcagagagccaggtggaccc
tctttcaccattggcaaagctatctggttgctgtggggtctggtgtttaacaactcggtg
ccagtgcagaatcccaaaggtaccactagcaagatcatggtgtctgtgtgggccttcttt
gctgtcatcttcctggccagttatactgccaacctggctgccttcatgatccaagaggag
tacgtggaccaagtgtctggactgagcgacaaaaagttccagaaacctaacgacttctcg
ccccctttccgctttgggacggttcccaatggcagcacagagaggaacattcgcaacaac
taccctgaaatgcatagctacatggtgaagttcaaccagaggggggtggacgatgcccta
ttctcgctgaagactgggaaattggatgcattcatttatgacgcagcagtgctaaactac
atggctggcagagacgaagggtgcaagctggtaacgattggtagtgggaaggtttttgcc
tctactggctatggcattgccatccaaaaggactcgggctggaagcgtcaggtagatctt
gccattctacagctttttggtgatggggagatggaggagctggaagctctgtggcttact
ggaatttgtcacaatgaaaagaatgaggtaatgagcagccagctggacatagataacatg
gcaggtgtcttctatatgctgggggcagccatggccctcagccttatcactttcatctgt
gagcatctcttctactggcaattccgccactgcttcataggcgtctgctctggcaagcct
ggcatggtcttctccatcagcaggggtatctacagctgcatccatggagtagccattgag
gagcaccagtcagcgatgaactcccccacagccaccatgaacaacacccattccaacatc
ttgcgcctgctccgcacagcaaagaacatggccaacctgtcaggtgtcaatggctcaccg
cagagtgccctggatttcatccgccgcgaatcctcagtctacgatatctctgagcaccgc
cgcagcttcacccactctgactgcaaatcttataacaacccgccctgtgaggagaacctc
ttcagcgactacattagcgaagtagaacggacctttggcaacctgcaactgaaggacagc
aatgtgtatcaggaccactaccaccaccaccatcggccccacagcattggtagtgccagc
tccatcgatggactgtatgactgtgacaacccacccttctccgctcagcccaggtccatt
gctaagaagccactggacattggtttgccaccttccaagcacagtcagttgggtgacctc
tatggcaagttctccttcaagaatgatcgctacagcggcggagggggccatgacgacttg
atccgctcagatgtctccgacatttccacccatacggtgacctatggcaacatcgaaggc
aatgccgccaagcggcggaaacagcagtataaggacagcctgaagaaacgtccggcttca
gccaaatcgcggcgggagtttgatgagatcgagctggcctaccgcaggcgcccaccccgc
tccccagaccacaagcgctattttagggacaaggaagggctacgggacttctacctggac
cagttccggaccaaggagaactcaccgcattgggagcatgtggacctgacggatatctac
aaagagcggggagatgagttcaagcgcgatgctgtagggggaggagggtcctgcaccaac
agggcccaccacaagcatgggtcagcggactttggaggagccaatgaccacaagcatggt
gttgtaagtggagtgccagcaccatgggagaagaacctgaccaacctagactgggaagac
cggccaggggctaatttctgccgcagttgcccctctaaattgcacaactataccccggca
gtggtggggcaaaactccactcgccagccctgtatccggtgtgaggcctgcaagaaggca
ggcaacctctatgacatcagcgaggacaactctctccaagagctggaccagccatctgcc
ccggtgccagtgacgaccagcgccacctcctccaagtatcctcagagcccatctaactct
gcctccaaggtgcagaagaagaaccgcaacaagctccgccggcagcactcctatgacacc
ttcgtggacctgcagaaggatgagtcagccctggctccccgcagcgtgagcctgaaggac
aagggccgctttttggaggggagcccctatgcccacatgtttgacatgtcatccagcgag
accgcttttgccaacaacaagtcctcagtgcccgccaccagccaccaccaccacaacaac
cccggcagcagcagctacatgctcagcaagtcactctaccctgaccgggtcacgcaaaac
cctttcatccccacttttggggatgaccaatgcttgctccatggcagcaaatcctatttc
ttcaggcagcctgtggtggcaggtgggcccaaagccaggccggacttccgagccattgtc
accaccaacaagccagtggtctcagcccttcacggggctgtgccagcccgtttccagaag
gacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaacccccagggct
ttcaacggctccagcaacgggcatgtttatgagaaactctccagtattgagtctgatgtc
tga
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