Caretta caretta (Loggerhead turtle): 125630037
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Entry
125630037 CDS
T09292
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125630037 (UTP20)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125630037 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
125630037
NCBI-ProteinID:
XP_048691397
LinkDB
All DBs
Position
1:complement(259532980..259616756)
Genome browser
AA seq
2800 aa
AA seq
DB search
MKPKSASHKSENTHRFLTFSERLGNVNIDIIHRIDRTGSYAEEVETYFYEGLQKWRELNL
TQHFVKFYKEVAGKCQSFNQLVYYQDAIVQSLKTHLQVKNSLAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITMLLDTQDTELLEWAFTTLSYLYKYLWRLMVKDMANIYSLYSTLLAH
NKQHIRNFAAESFTFLMRKVSDKNALFNVMFLDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAEKAIKFILLKLGPITEIEAKLPWIIVGEAFKHMVKSAAVHIYKEHFEVLFKCLEESV
LELQERITKANCCEISEQIERILQVYLILAEHANGSKISQPEAVCKTLAKMLQTSDLSVP
CCKTLLKTLSVLLLAENVFLPDAVTKETIEKVFGSGFERRLLLDFSKTVFSMNEFEQHFL
PCFLEYIEDCFSGEDVLARDEAMAILAKLILEKAEPPTVGSMAFEKYPLVFTEPPIGSNT
RLKMSRRNGERKQMPVLDHILSLIHLPENEDIIDLSHPWAALVVLPHVRPIDKEKILLPV
TSFIESLFLAIDRGRLRKGGLYVACQAVSTLLSLAESSEILRLLPVERVKNLVSTFPSDL
SALLLADLYYTRLALCGCQDPLSHENLMDLFDKLKTNISSSISKVRLLTIRILNHFEAQL
PTSTKDDATGELQSVFAILLQAELVPASVNDYREKLLHLRKLRHDVVQSAVPDGPLHEVP
LQYLLGMLYINFSPLWDPVVELITSHANEMENKQFWKVYYEHLEKAAVYAERELQDKLSE
EQAGTADAESEKIREGNVGSLYLEQLRFRTDCSERIDYANFRFLLWKALAKVPDRVEPRS
RELSPLLLRFISNEYYPADSLVAPTQDLRKKNSGVAEEEEKPTEEIHQATKEEEKEEVEG
MDEPVVEGLQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEPKLNELYNQLLSHQDQNVQ
KVALDCIMTYKHPHLLPYKENLQRLLEDKSFKEEIVHFSISEENTIVKMQHRPDLVLVLM
RILYGRMRNKTGSRTQGKSAAGTRMSIVLRFLAGSLPEEIRMFLDLLFEPVKHFSAGPCQ
VAVLQTISELDLSKVLPLGRQHSLFNSFEVVLKNMGHLITRYLPEILQILLCMTATVSHI
LQQREKIQLRFINPLKNLRRLGIKLVAEFFSDFETYSFTVDEIDAIFEAVIWPQISRLAS
ESQYSPTLLLKLIHIWSKNSRYFPLLAKQRPGHPEYDTLLNVFALLSTKNLCEATAGVVM
DVADNLLNSPDFEPTDLVSSLTVTDCVCLESDTDGMTEESPSLGARLILPHVPAVLQYLS
KTMLNVEKVKKKKFRAQVSKELNILSRISKFIQDKGQSSVLISLLLPFLHQSSIMQDTEI
DILVTVQNLLRHCLNPTSFLKPLAKLFSVIQNKLSRQTLCVVFQTLSDLEGELKYITEVV
KLNAFDQRHLDDINFDVRLSAFQGITSQVKEMQRVDINFLIPVMHNCFYTIQLGDMSLSD
SASLCLTSIIHRIAEISHTEDEYKEIIQHTLLLSLRKGLKSKTENIQQDYTSLLSCLIRT
FPKHPEFQDLVQLTDCHDPEVDFFENMKHIQIHRRARALKKLAKQLTEDKIVLSSKSLQN
YIMPYATTTLFDEKMLKHENMITASVEVVGAVCRRLSWSAYMYHLKHFIHVLQTGQMNQK
LAVSLLVTVLEAFHFDHETLEKQLETLQNEDAEAMDAEEAAENEAMELEQSEGEEEAEGD
KSKNLPEDSEKQGDPALIQHEQAGTGESEETQKATKSISSLPRNKEELECLIEHIQGTVT
GSILPKLHRCLAAKVKRDEEHKLVKSKAVNDEEVVRVPLAFAMVKVMQSLPQEVMEANLP
SILLKVCSLLRNRAQEIRDIARNTLTKIMEALGARYLQYVLREMQSILIHGYQVHVLTFT
VHLLLKGLTSRISTGDLDTCLDIMIEIFNQELFGDVAEEKEVKGIVSKVMEARRSKSYDS
YEILAKYVGKDQVTKLILPLKEILESTMSLKMSRKVNETLRRIMSGLILNPEMSAESILV
LSHGLISENLPLLTEKARTKAPAPPDPRLQPESCLLLPPVPARGGQKAPVSSKTNMHILV
DSGLRLLHMSLKRSKINSSDEHVLEMLDPFVQLLINCLQSTDVKVITGALQSLVWILKFP
LPSIEKNTEQLTKQLFLLLKDFAKPGAARGQNFHLVVNCFKCVTRLVRNTNSHITEKQLQ
VLLGYAEEDIYDSSRQATAFGLLKAILSRKLIVPEIDAVMQKVAKFAITGQSEPVRVQCR
QIYLKYILDYPLGDKLKPNLEFIFAQLNYDYETGRESALEMIAYLFEMFPQGLLHQYCGL
FFVPLCMMMVNDDSAKCKKMAAMANKSLLIKVNSANRDLMFSLVTMWFNSEKSSHKRLAT
QACGLFVEAEGVAFESQLGAVLPLIEKEIEPLKFEDITEETEEKAADRLLFSFLTLIIKL
IKECNIILLTKHNEILSNIWRHVQSHLWYPHSWVWLTAAQIFGLLFASHKPEELVSKWNE
RKAGKSKKTMVEPAATRFFTDELDKKMKELALAFCHQLQSRFLDQSLGEQVIKNLLFVAR
VLYLLVPDSEEGEETKDYEMGGQEDASEDEGEKAASAQEEKEGEAEEKSRPATVLWVMKR
LSLMAKREAAYSPKNPVKRTCIFKFLGAVAVDLGKDRIKPYLPTIITPLHRELSSTYAEQ
DPTLKNLSQEIIELLKKLVGLETFSLAFASVQKQASQKRAIRKKQRALQTVANPDIAARK
KLKKHKNKIEARKRKIEFLRPGYKAKKPRSHALKDLAMVE
NT seq
8403 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaaatccgcctcgcacaagtccgagaacacgcacaggtttctcaccttctct
gaacgcttaggcaatgttaatatcgatattattcatcggattgacaggactgggagctat
gctgaggaggttgaaacctacttttatgaaggactgcagaaatggagagaactgaacctc
acacagcactttgtgaaattctacaaagaagtggccggcaaatgccagtcattcaaccag
ctggtgtattatcaggatgccatagtgcagagcttgaagactcatctgcaagtcaaaaac
agtcttgcatatcagccccttttggaccttgtggtacagctggctcgagatctccagaca
gacttctaccctcactttcaagacttttttctgaccatcaccatgttattggatacccaa
gacacagagctgctagaatgggcttttaccactctttcctacctttacaaatatctgtgg
agactgatggtgaaggatatggccaatatatatagtttatacagtaccttgttggcacac
aacaaacaacacatcagaaactttgctgcagaaagcttcacctttctaatgaggaaggtt
tctgataaaaatgcgcttttcaatgtaatgtttcttgacctgggagagcacccagaaaaa
gtagaaggcgtgggacagttactctttgagatgtgcaagggggttaggaacatgtttcac
tcctgtgcagagaaggctataaagttcattctgctaaagcttgggcccattaccgagatt
gaagctaaactcccatggattattgttggagaagctttcaaacatatggtaaaatcggct
gcagtgcatatctacaaggagcattttgaggttcttttcaaatgtttggaagaatcagtg
ttagaattgcaggagagaataacaaaggccaactgctgcgaaatctcagaacagattgaa
aggatattgcaagtgtatttgatcctagcagaacatgcaaatgggtccaaaatctctcaa
cctgaagcagtttgtaagacgttagcaaaaatgttacaaacatctgatctctcggtgcct
tgctgtaagactctgcttaaaacgctttctgttttgctgcttgctgagaatgttttcctg
ccagatgctgtgaccaaggaaaccattgagaaggtatttggaagtgggtttgaaaggcgc
ctccttttggatttctccaaaacagtgttttcaatgaatgagtttgagcagcattttctt
ccatgctttctagagtacatcgaggactgcttctctggagaggatgtgctagctagggat
gaggccatggcaattttggctaaactcattctggagaaagcagaacctcccactgttggc
tcaatggcttttgaaaaatatccccttgtttttacagaaccaccgataggatccaataca
agactcaagatgagtaggagaaatggagaaaggaaacaaatgccagtgttggatcatatt
ctgtctctaatccacttaccagaaaatgaagacattattgatctttcacatccttgggct
gcccttgttgtacttccgcatgttagaccaatagacaaggaaaaaatcctgctaccagtt
acaagttttatagaatctctcttcctggctattgacagaggaaggctccgcaaaggaggc
ttgtatgtggcctgccaagctgtgagcacgctacttagtttagcagaatcttctgaaatt
ctccgtttgttacctgtggaacgtgtgaagaacttggtgagcacctttccttcagaccta
tcagccttgctactggctgatctctattatacgcggttggctttgtgtggttgccaggat
cctctttcccatgagaacttaatggatttgtttgataaactgaaaacaaatatttcctcc
agcatctccaaggtccgactcttgacaataaggattttaaatcattttgaggctcagctt
cctacatcaaccaaggatgatgcaacaggagagcttcagtccgtgtttgccatattactt
caagctgaactcgtgccagccagtgtgaatgattatagagaaaaacttcttcatttaagg
aaactgaggcatgacgtggtgcagtctgcagtaccagatggacctttacatgaggtgcct
cttcagtatttactgggaatgctctacattaacttcagccctctctgggatcctgttgtt
gagctcataacatctcatgcaaacgaaatggagaataaacagttctggaaagtctattat
gagcacttggagaaagcggctgtctatgctgagagggagctgcaagataagctgagtgaa
gagcaggcaggcactgcagatgcagaaagtgagaagatccgagaaggaaatgtgggaagc
ctgtatctcgagcagttgaggtttagaacggattgcagtgagcggatagattacgcaaac
ttccggtttctgctttggaaggcattggccaaggttccagacagagtggagcccaggtca
agggagctttccccgcttctcttgagattcattagcaatgagtattacccagcagattct
ctagtggctccaacccaggatcttagaaagaaaaacagtggtgtagcagaagaggaagaa
aaacccactgaagagatacaccaagctaccaaggaggaggagaaagaggaggtggaggga
atggacgaaccggtggttgaagggttgcaaaaaaagaaaacaagaagagctgcagcaaag
cagctaatagcccatttgcaagttttctccaagttttcgaatccacgtgcgctgtatctg
gaaccaaagttaaatgagttgtacaatcagctgttgtcccatcaagaccagaatgtacaa
aaagtagcccttgactgcatcatgacctacaagcatccacatctactgccatacaaggag
aacttgcaaagattactggaagataagagctttaaagaagaaatagtccatttcagcata
tccgaggagaacactatagttaaaatgcaacaccgaccagatcttgttcttgttcttatg
agaattctgtatgggcggatgagaaacaaaactggaagcagaactcagggcaaatctgct
gcaggcacccgtatgtcaattgttctgaggttccttgctggctcgctgcctgaagagatc
agaatgttcctggacctgctctttgaacctgtgaagcacttcagtgctggaccgtgccag
gttgcagtactccaaacaatatcagaactggatttatctaaagtcctgcctctaggccgc
cagcacagtctgttcaacagctttgaggttgtactgaaaaatatgggccatctgatcacc
cggtacttacctgagattttacagattttactttgtatgacagcaacagtatcccacatc
cttcaacaaagagagaagatccaactaaggtttattaacccactgaaaaatttgaggcgt
cttgggatcaaacttgtggcagagtttttttctgattttgagacctacagctttacagtg
gatgagattgatgccatttttgaggcagtgatatggccccagatcagcaggctcgcttct
gagagccagtattctcctactctgttactcaaactcattcacatctggagcaagaattcc
agatatttccctttgctggccaagcagagaccagggcacccagaatacgatacgctgttg
aatgtctttgctctgctgtccaccaagaatctctgtgaggcgacagctggtgttgtgatg
gatgtggctgacaacctcctcaatagtccagattttgaacccacagacctggtttccagc
ttgacagtgactgactgcgtttgtttagagtctgacaccgatggaatgacagaagagtcc
cccagcttgggtgcacggttaattctgcctcacgttcctgcagtacttcagtatctcagc
aaaaccatgttaaatgtggaaaaggtgaaaaagaaaaagttcagagctcaagtcagcaaa
gagctcaacattctttccaggatcagcaagtttatacaggacaagggtcagagttctgtg
ctcatcagcctcctcctccctttccttcaccagagtagcattatgcaggatacagagatt
gacatcttggtgacagtgcagaacttgctgaggcattgcttaaaccccacaagcttcctt
aagcctctggcaaaactattttcggttatccagaacaaattatctcgacagacactctgt
gtggtttttcagactttatctgatctggaaggtgaattgaaatacattacggaggtagtt
aagttgaatgcctttgatcaacgacatctcgatgatatcaattttgatgttcgcttgtca
gcgttccaaggaatcacttctcaggtcaaagaaatgcaaagagtggacatcaactttctt
attccagttatgcataactgtttctacaccatacagttaggggacatgtctttaagtgac
agtgccagcctgtgcttgaccagtattatccaccggatagcagaaatcagccacacggaa
gatgaatacaaagaaataatccagcacactctcctgctgtctctgagaaaaggactgaag
agcaagactgagaacattcaacaagactatacttcgttactttcctgcttgattcgaact
tttccaaagcacccagagtttcaagacttggtccagctaactgactgtcatgatcctgag
gtggatttctttgagaacatgaaacatattcagatccacagaagagctcgagccttaaag
aaattggcgaagcagctaactgaagacaaaatcgtactgtcctccaaatctctgcagaac
tacatcatgccttatgcaactacgacactttttgatgagaaaatgcttaagcatgaaaat
atgataacagcttcagttgaagttgtaggcgctgtttgtaggcgtctctcttggtcagca
tatatgtaccatttaaaacatttcatacacgttttgcaaactggacagatgaatcaaaaa
ctggctgtcagcttgttagtgactgtgctagaagcttttcattttgaccatgaaaccctt
gaaaagcaacttgagactcttcagaatgaagatgcagaggccatggatgctgaggaagca
gcagagaatgaagccatggaattggagcagagtgagggggaggaggaggctgagggagac
aagagcaagaacctgcctgaggacagtgagaagcagggggatcctgcactgattcagcat
gaacaggcaggcaccggagaatctgaggagacccagaaagccacaaaatccatttcttcc
cttcccagaaataaggaggagctggagtgtctgattgaacacattcaaggaacagtaact
ggcagcatcttgcccaaattacacaggtgtcttgccgcaaaggtgaaaagagatgaggaa
cacaagcttgtgaaatccaaggctgtgaacgatgaagaggtggttcgggtgccattagca
tttgccatggtcaaggtgatgcagtctctcccacaagaggtcatggaagctaatctgcca
agcattcttctgaaagtctgctcgcttctgaggaaccgggcgcaggaaatccgggacatc
gcacgcaacaccctcaccaaaatcatggaggctttaggagcacggtacctgcagtatgtc
ttaagagagatgcagtcgattctcatccatggctaccaggtccatgtgctgactttcact
gtgcacctgttactgaaaggcctgaccagcaggattagcactggcgatttggacacctgc
ttagacattatgattgagattttcaatcaggagctgtttggggatgttgctgaggaaaag
gaagtgaaggggatagtctccaaggtcatggaggctcgcagaagcaagagttacgattct
tacgaaatccttgccaagtacgtagggaaggaccaagtcacgaagctcattcttcctttg
aaagagattttagagagcaccatgagcttgaaaatgtcccgcaaggtgaacgaaacgtta
cgtcgcatcatgtcagggttgatcctaaatccggaaatgagtgcagaatccattctcgtg
ctcagccacggcctgatcagcgaaaatctgcccctgctaacggaaaaagccagaacgaaa
gccccggctcctccagatcctcgtctgcaaccagaaagctgcctgttactcccacccgtc
ccagctcgaggcgggcagaaagcacctgttagcagcaagactaacatgcatatcttggtc
gactcaggacttaggctactacacatgagcctgaagagatccaaaataaattcctcagat
gagcatgtgttagaaatgttggatccttttgttcagctgcttataaattgcctgcaatcc
acggatgttaaggtgatcactggcgccctgcagtctttggtgtggattttaaagttccct
ttgccttctattgaaaagaatacagagcaactaaccaagcagctttttctgctgctgaag
gactttgccaagccaggagcagccaggggccagaacttccatttggtggtgaactgtttc
aaatgcgtaactagacttgtgaggaacacaaacagtcacataacagagaaacagctccaa
gtgttgctgggatatgctgaagaagatatctatgattcctcgcgtcaagccactgccttc
ggccttttaaaggctattttatccagaaagctgattgttcctgaaatcgatgccgtcatg
cagaaggttgccaagtttgccatcacaggccagagtgagccagtgcgagtccagtgcagg
cagatttacctgaaatacattctcgactatccccttggtgacaagctgaaacccaatttg
gagttcatatttgctcagctcaattatgactatgagacaggaagagagtctgcgttggag
atgattgcttacctcttcgaaatgttccctcagggattactccatcaatactgcgggctg
ttctttgtccctctctgtatgatgatggtaaatgacgactctgccaagtgcaagaaaatg
gcagccatggcaaacaaatctctgctcattaaagtaaactctgcaaaccgagatctgatg
ttctcactagtcaccatgtggtttaacagcgagaagagctcacacaagagactagccacc
caggcctgtggtttgttcgtggaagccgagggagtggcgtttgaaagtcaacttggagcc
gttctcccactgatagaaaaagaaattgaacctctgaaatttgaagatataacagaagag
actgaagaaaaggcagcagacagattgttgttcagttttcttactttgataataaaatta
atcaaggaatgcaacattattctgttaaccaaacataatgagattttgagcaatatctgg
cgtcacgttcagtcccatttgtggtaccctcacagctgggtgtggctgactgctgctcag
atttttggcttgttgtttgcttctcacaagccagaggaacttgttagcaaatggaatgag
aggaaggcaggcaagagcaaaaaaaccatggtggagccagcagcgaccaggttcttcaca
gatgagctggataaaaagatgaaggaacttgctttagcgttctgtcaccagctgcagtcc
aggttcctggatcagtctctgggagagcaggttataaagaacttgttgtttgtggccaga
gttctctaccttctggtcccagattcagaggaaggggaggagaccaaagattatgaaatg
ggagggcaggaggatgcttctgaagacgaaggtgaaaaggcagcatctgctcaggaagag
aaggaaggcgaagcagaagagaaaagcagaccagccacagtgttgtgggtgatgaaaaga
ctctctctgatggcaaagcgagaagcagcatattcccctaaaaaccctgtgaagagaact
tgcatctttaagttccttggagctgtagcagtggatcttgggaaagacaggatcaagcca
taccttccaacaatcatcacccctctgcacagagagctgagtagcacctacgcagaacaa
gatccaacactgaagaacctatcccaggaaatcatagaactgctcaagaaattagttggc
ctggagaccttttcacttgcctttgcttctgtgcagaaacaggctagtcagaagagggct
atcaggaaaaaacagagagcactgcagactgtagcgaaccctgacattgctgccaggaag
aagctgaagaaacataagaataaaatagaagcaaggaagaggaaaatagaattcctgcgc
cctggctacaaggcaaagaaaccaagaagccatgcgctaaaagacttagcaatggtggaa
tga
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integrated database retrieval system
