Caretta caretta (Loggerhead turtle): 125630187
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Entry
125630187 CDS
T09292
Symbol
LGR5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125630187 (LGR5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccay04030
]
125630187 (LGR5)
G protein-coupled receptors [BR:
ccay04030
]
Rhodopsin family
Others
R-spondin
125630187 (LGR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_R13L1-DRL21
LRR_Zer-1
7TM_GPCR_Srx
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
125630187
NCBI-ProteinID:
XP_048691738
LinkDB
All DBs
Position
1:complement(278903633..279032202)
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AA seq
910 aa
AA seq
DB search
MDTSCPPSALLLLCLLGLPGASSGGLASPAGRRQRGCPALCQCEQDGMLLRADCSDRGLT
AVPTNLSLFTSYLDLSMNNITKLPSNPLHNLRFLEELRLAGNGLTYIPRGAFAGLFSLKV
LMLQNNQLEQVPTEALQNLRSLQSLRLDANHINYVPPNCFSGLISLRHLWLDDNSLTEIP
VHAFRSLPALQAMTLALNKIYHIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLET
LDLNYNSLDEFPTAIRTLTNLKELGFHSNNIKSIPEHAFVGNPSLITIHFYDNPIQLVGQ
SAFQHLPELRTLTLNGASQITEFPDLTGTTSLESLTLTGAQVTSLPTVACDQLPNLQVLD
LSYNLLEDLPCFTACKKLQKIDLHHNEIYEIKADTFQQLVALRSLDLAWNKIAVIHPNAF
SSLPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNHDLQSLISSENFPELKIIEMPYAYQ
CCAFGTCESHYKISSQWNKDENSSADDFHKKDSGMLHIQDERDFEDFLLDFEEDLKVHHL
VQCSPSPGPFKPCDHLFGSWLIRIGVWTIVGLAFICNALLTATVFKSPLYISSIKLLIGL
IAIVNILMGLSSGVLASMDALTFGSFAQYGAWWESGVGCQVTGLLSIFASETSIFLLTLA
ALERGFSIKYATKFETKSSLASVKIAIFFCFMLALIIAVVPLLSESQYGVSPLCLPLPFG
EPSSMGFMVALVLLNSLCFLVMTVAYTKLYCSLEKGELDNIWDCSMIKHIALLLFTNCIL
YCPVAFLSFSSLLNLTFISPEVIKSILLVIVPLPACLNPLLYILFNPHFKEDLGSLRKQT
LLWSRSKHTSLISVNSEDVEKQSCDSTQALVTFASASISYDVPTSNSLMPSSYQTTESCN
LSSVAFVPCH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcctgcccgcccagcgcgctgctcctgctctgcttgctcgggctgcctggg
gctagcagcggggggttggcgagccccgccgggaggcggcagaggggctgcccggctctg
tgccagtgtgagcaggacgggatgctcctcagggcggactgctccgaccgggggctcaca
gcggtgcccaccaacctcagcctcttcacctcctaccttgatctcagtatgaacaacatc
actaagctgccctcgaaccccctgcacaatctccgcttcctggaagagctacgtcttgca
ggaaatggcttgacatacattcccaggggagcatttgccggccttttcagtcttaaagtg
ctaatgctgcagaataatcagttagagcaggttcccactgaagcactccagaacttgcgc
agtcttcagtctctacgtctggatgccaaccacatcaactatgtgccacccaactgcttc
agtggcttgatctctcttagacacttgtggctggatgacaactctttgacagaaattcct
gtgcatgcttttaggagtttaccagcacttcaggcaatgacactagcattgaacaaaata
tatcacataccagactatgcttttggaaacctctccagtttggtagttctacatctccat
aacaatagaatctactccctgggaaagaaatgctttgatgggctccacagcctagagact
ttagatttaaattacaacagtctggatgagttccccactgctatcaggacactcacaaac
ttaaaagaactgggatttcatagtaataacatcaaatcaatacctgagcacgcatttgtg
ggcaatccgtcacttataacaattcatttctatgacaaccctatccagcttgtgggacag
tcagcttttcaacacttaccagaactcagaaccctgactttaaatggtgcttcacaaata
actgagtttcctgatttgactggaactacaagtctggaaagtttgacacttacaggagca
caggtcacctctcttcccacagtagcttgtgatcagctacctaatcttcaagtgctggat
ctgtcttacaatctgctagaagatttaccctgttttactgcttgcaaaaaacttcagaaa
attgacttacatcataatgaaatctatgaaatcaaggccgacacatttcagcagctggtt
gccctgcgttctctggatttagcttggaacaaaattgcagttattcaccccaacgcattc
tcctctttaccatccctgatcaaactggatctgtcatccaaccttttgtcctcttttcct
gtgactgggctacatggtttaactcatttaaaattaacaggaaatcatgacctacaaagt
ttgatatcatctgaaaattttccagaactcaagatcatagaaatgccttatgcttaccag
tgctgtgcatttggaacttgtgaaagccactacaaaatctccagccagtggaacaaagat
gagaacagcagtgctgatgattttcataagaaagattctggaatgttacacattcaagat
gaacgtgactttgaggattttctgcttgactttgaagaagatttgaaagtccatcatttg
gtgcaatgctcaccttctccaggccccttcaaaccatgtgaccatctgtttggtagttgg
ctaatcagaattggagtgtggaccatagtaggtttggcatttatttgcaatgcactgtta
actgcaacagtcttcaaatctccattgtatatttcctctataaaacttttaattggactg
atagccattgtaaacatactaatgggtctgtccagtggtgtattggccagcatggatgca
ttaacctttggcagctttgctcaatatggtgcttggtgggaaagtggagttggttgccaa
gtcactggccttctgtccatttttgcttcagagacttccattttcctccttaccctggca
gcactcgaacgtgggttctccataaagtatgctacaaagtttgaaacaaaatcctctctt
gctagtgtgaaaatagccattttcttttgctttatgttggcactgataattgcagtggta
ccacttctcagtgagagtcaatatggggtgtctccgctctgtttacctttgccatttggg
gaacccagctcgatgggcttcatggtagcactggtcttgttaaactctctgtgctttctg
gtaatgactgttgcctatacaaaactgtactgtagtttggagaagggagaactagacaat
atttgggactgttctatgatcaagcacatagcattattactttttactaattgcattctt
tattgccctgtggcctttttatctttttcctctttactaaacctcacttttattagccca
gaagtgattaaatcaatacttctagtgattgtcccactgcccgcatgtctaaacccactt
ctttatatccttttcaatccacattttaaggaagatctgggaagtctcagaaagcaaact
ttgttatggagcagatcaaaacatacaagtctgatctctgttaattcagaagatgtagag
aaacagtcctgtgactcaacacaagccctggtaacctttgcaagtgccagcatatcatat
gacgtgcctaccagcaactcactaatgccatcatcttatcaaacgacagaaagctgtaat
ctttcatcagtagcattcgttccatgtcactag
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