Caretta caretta (Loggerhead turtle): 125630192
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Entry
125630192 CDS
T09292
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125630192 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125630192 (CNOT2)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125630192 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125630192 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125630192
NCBI-ProteinID:
XP_048691749
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All DBs
Position
1:complement(279681312..279833003)
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AA seq
539 aa
AA seq
DB search
MFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDFAEREEVKCISESHFKKLQMLAS
PSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSL
HTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQP
SRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREG
SGNPTPLINPLAGRAPYVGMVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSN
LSTSGKTSSSADGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLL
TFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEY
LTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITR
APGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccacgatgaa
aacatgtactacagccagtcttcaatgttcccacatcggtcggaaaaagattttgcagag
agggaggaagtaaaatgcatctctgagtcacattttaagaaattacagatgctggcatca
ccatctacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagtgca
ctaggccttccaatgaggggaatgagcaacaatacccctcagttaaatcgcagcttatca
caaggcactcagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtcactt
catacgcctccatctccgagcaggggtatattgcctatgaatcctaggaatatgatgaac
cactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagttca
gggttaggcagccccaacagaagctcacctagcataatatgtatgccaaagcagcaaccc
tctcgacaaccttttactgtgaacagtatgtctggatttggaatgaacaggaatcaggca
tttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaaaat
gtgacaggattggacctttcagattttccagcactagcagacagaaatagaagggaagga
agtggcaacccaacaccattaataaacccattagctggaagggctccgtatgtcggaatg
gtaacaaaaccagcaagtgagcaatcccaggacttctcaatacacaatgaagattttcca
gcattaccaggctccagttacaaagatccaacatcaagtaatgatgacagtaaatctaat
ttgagtacatcaggcaaaacatcttctagtgcagacggacccaaattccctggagataaa
agttcaacaacgcaaaacaacaaccagcagaaaaaagggatccaggtgctacctgatggt
cgggttaccaacattcctcaagggatggtgacggaccagtttgggatgattggcttgtta
acattcatcagggcagcagagacggacccgggaatggtacatcttgcattaggaagtgac
ttaacaacactaggtctcaatctcaactctcctgaaaatctctaccccaaatttgcatca
ccttgggcatcttcgccttgtcgacctcaagacatagacttccatgttccatctgaatac
ttaacgaacattcacattagggataagctggctgcaataaagcttggcagatatggagaa
gatctactgttttatctctattacatgaatggaggagatgtattacagctattagcagca
gtagagctatttaaccgcgattggagataccacaaagaagaacgagtatggatcaccagg
gcaccaggcatggagccaacaatgaaaaccaatacatatgagaggggaacatattacttc
tttgactgtcttaactggaggaaagtagctaaggagttccatctggaatatgacaaatta
gaagaaaggcctcatctgccatcaaccttcaactacaaccctgctcagcaagccttctaa
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integrated database retrieval system
