KEGG   Caretta caretta (Loggerhead turtle): 125630409
Entry
125630409         CDS       T09292                                 
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04510  Focal adhesion
ccay04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125630409 (LAMB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125630409 (LAMB1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C BNR_6
Other DBs
NCBI-GeneID: 125630409
NCBI-ProteinID: XP_048692274
LinkDB
Position
1:311454027..311523663
AA seq 1786 aa
MGCLQTYLGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLHRP
EPYCIVSHLQEDKKCFTCNSLFTFHETLNSDSHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCENSFPGVSTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRISFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCELCLDFYHDLPWRPAEGRHSNACKKCNCNGHSIQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPEREIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADNPLGCQSCACNPLGTLPGGNPCDSETGSCYC
KRLATGRHCEQCLPEHWGLSNDMDGCRPCDCDQGGAINNNCSSETGQCPCRPHMIGRQCN
EVESGYYFMSLDHYIYEAEEANFGPGVSIVERQYSQDRIPSWTGVGFVRVPEGAYLEFYI
DNIPYSMEYDVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPDDDNQTVSLSPGS
RYVVLPRPICFEKGLNYTVRLELPQYSSLDTEVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDMVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCNPQGSL
SSVCDSNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKSCECHVQGSVSSFCHPETGQCH
CFHGVYGRQCDRCLPGYWGFPSCPPCQCNGHTDDCDPYTGECLNCHDSTTGHNCERCLGG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPITLQIVCVCNVGYIGSRCDECASG
FFGDPEEIGGVCQPCQCNNNIDMADPGACDKQSGKCLKCLYQTEGENCQLCKYGYYGHAL
QQDCRKCVCNYLGTVREHCNSSEGCQCEKTTGQCQCLPNVTGQNCDRCAPRTWRLASGTG
CELCECDVAHSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGIQ
TPQCNRSTGLCVCKEGVEGPSCDKCTRGYSGIFPDCAPCHQCFALWDVIISELTNRTQRF
LERAKILKISGVSGPYQQTVNTVEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLAADV
TEKMAEIEDKLSVIALKSNNTDTHLRALETDAESLDHVVKELAEQLEFIKISDIRGALDS
VTKYFQMSLEAEERVNASSVHPDSLVELSAQTRQEVEDLISEQEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTPSGASCADSECGGLNCRTEEGEKKCGGPGCEGLVTVAHGA
WQKAMDFDRDILSALAEVEELSKMVSEAKQRADEAKQNAQKVLLKTNATKEQVDRSNEDL
RNLIKQIREFLMQDSADLDSIEAVANEVLNMEMPSSPQQLQTLTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLDEANKASKSAKDVKVTAAIVKEALEEAEKAQNAAEKAIKQADEDI
RGTQDLLTSIESENAASEETLNNATLRLTELEKNVEDLKQKTATNSENVEEIEETIATVK
QNAEEVKEVLDSELNAKYKTVENLIAKKTEESADARKKAGTLQNEAKSLLAQANSKLQLL
KDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq 5361 nt   +upstreamnt  +downstreamnt
atgggctgcctgcagacgtaccttggcgctctcctagggctgtgggccgccgccctggct
caggagcccgagtacagctacgggtgcgccgagggcagctgctacccggccaccggcgac
ctgctgatcggccgcgcctcgcagctgtccgccagctccacgtgcgggctccaccggccc
gagccctactgcatcgtgagccacctccaggaggacaaaaaatgtttcacctgcaattcc
ctgttcaccttccacgagactctcaactctgatagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgtctcaagctgtggtggcagtcagaaaatggtttggaaaatgtt
actctccagctggatctggaagctgaattccatttcactcatctcattatgaccttcaag
acattccgcccagctgcaatgctaatcgaaagatcatctgattttggaaaaacctggaaa
gtatatagatactttgcatatgactgtgagaactcctttcctggtgtttcaactggaccc
atgaagaaagtagacgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgctttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctattaaaaatcacaaatttaagaatcagtttcaccaagttacat
acgttgggagacaacctcttagattctagaatggaaatcaaagaaaagtactactatgca
atttatgacatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgca
ccagtagacggctttaatgaagaggtggaaggaatggtccacgggcactgcatgtgcaga
cataataccaaagggttaaactgtgaactgtgtttggatttctaccatgacttaccgtgg
agaccagctgaaggacgccatagtaatgcatgtaaaaagtgcaattgtaatggacattct
atccagtgccattttgatatggctgtatacatggcaaccggaaataccagtggtggagtg
tgtgatgactgccagcataacacaatgggacgcaactgtgaacaatgcaaaccattttac
tttcagcatccagagagagagatacgagatcctaacatttgtgagccatgtaactgtgac
ccacttggctcccaaaatggtggaatatgtgatcgctacactgacttctctgctggcctt
attgctggacagtgccgctgtaaattatttgtggaaggggaacgttgcgacctctgcaaa
gaagggttctatggattaagtgcagataatcccctgggttgtcaatcttgtgcatgtaat
cctttgggaactcttcctggagggaatccttgtgattcagagacaggaagctgctattgt
aaacgtctagcaacaggaaggcactgtgagcagtgtctgcctgaacactggggcctgagc
aatgacatggacggatgtcggccttgtgactgtgaccaagggggagcaataaacaataac
tgctcaagtgaaactggccagtgtccatgccggccccatatgattggacgccagtgcaat
gaagtagagtctggctattacttcatgtcattagaccactacatctatgaggcggaggaa
gccaactttggtcctggagtgagcatcgttgagcgccagtattctcaagatcgtatccca
tcctggactggagtaggatttgtaagagtccctgaaggggcatatctggaattctatatc
gacaatattccatattctatggaatatgatgttgtgattcgctatgagccgcagttacca
gatcactgggaaaaagctgttattacggtttcacgcccaggcaagattcctacaagtagc
cgatgtggtaataccgttcctgatgatgataatcagactgtatcattatctccaggctca
agatatgtcgtccttccacgacccatatgctttgaaaagggactgaattacactgttcgt
ctggagctaccacagtactcctccctcgacactgaggtggaaagcccatacacactcatt
gactcgctcgttcttatgccttactgcaaatcactggacatattcacggtggggggctca
ggcgaagatatggtcactaacagtgcttgggaaacatttcaaagataccgatgtctggaa
aacagcaggagtgttgtgaaaacccctatgactgacgtctgcaagaatattatttttagc
atctctgcactgttacatgagaccgcattatcttgccagtgcaaccctcaaggctcatta
agttcagtgtgcgactctaatggaggacagtgccagtgtcgtccgaacgttgttggaaga
agatgtgacagatgtgctcctggcacctttgggtttgggcctaatggatgcaaatcttgt
gaatgtcacgtacaaggttctgtcagttccttctgtcatcctgagactggccagtgccac
tgtttccatggagtgtatggccgccagtgtgataggtgcttacctggatattggggattt
ccaagctgtccgccttgccagtgtaatggccacacggatgactgtgacccatacactggg
gaatgtttgaattgccacgattccaccacgggacacaactgtgaaaggtgccttggtggc
tattatggagaccctgtcctgggatcaggagatcattgtcggccttgtccttgcccagat
ggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctattactctgcaa
attgtgtgtgtctgtaatgtgggatacataggaagcagatgtgatgagtgtgcttctggt
ttctttggagaccctgaagagataggtggagtctgccagccatgccagtgtaacaacaac
attgatatggctgacccaggggcctgtgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaattgccagctgtgtaaatatgggtactatggacatgcgttg
caacaggattgcagaaagtgcgtctgtaattacttgggaacagtgcgagagcactgcaat
agctcggaaggctgtcagtgtgagaaaacaaccgggcagtgccaatgccttcccaatgtg
accgggcagaactgtgatcgctgtgcaccacgcacttggagactggccagtggaactgga
tgtgaactgtgcgagtgcgatgttgctcattccttcgggccatcgtgtaatgagttcacg
gggcagtgtcagtgtatgcctgggtttggaggccgcacctgcagggagtgccaagagttt
ttctggggtgaccccaatgtggcatgccaagcttgtgattgtgatccccgtggaatccag
acacctcagtgcaatcgctccacggggctgtgcgtctgtaaggagggtgtcgagggaccc
agctgtgacaagtgcacccgcggctactctggcatcttccctgactgcgcgccatgccat
cagtgtttcgctctgtgggacgtcatcattagtgaactgaccaataggacacagcggttc
ctggagagagcaaaaatcctgaaaatcagtggggtcagtggcccttaccagcaaactgtc
aacactgtggaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagctgct
gagccccttaaaaacattggaaatctctttgaggaagcaggcaaactagcagcagatgtt
acagaaaagatggctgaaatagaagacaagctctccgtgatagcgttaaaaagcaataac
acggacactcacctgagggccctggagacagatgcagagagcctagaccacgttgtgaaa
gaactggcagaacaactcgagtttataaaaatctctgatatccggggagccttggatagt
gtcaccaaatattttcagatgtccctggaggcagaagagagggtcaatgcctccagtgtt
caccctgatagccttgtggaactgtcagctcagacacgacaggaagtggaagacttaatc
agtgagcaagaggcccagttcaaggcaaaacaagaagaacagtcacgccttctggatgaa
ctcgcaggcaagctgcaaagtctggatctttctgaagtggctgagaagacatgtggaact
ccctcaggggcttcctgtgctgactcagagtgtggcggtctgaactgccgaacagaggaa
ggagaaaagaaatgtggaggaccaggctgcgagggattggttactgtggctcacggtgcg
tggcagaaagccatggattttgacagagacatactcagtgccttggcggaagttgaagaa
ctctctaaaatggtctcagaggcaaaacagagagcagacgaagcaaaacaaaatgcacaa
aaagttttgctcaaaaccaatgccacaaaagaacaagtggacagaagcaatgaagatctg
agaaaccttattaagcagatcagggaatttctgatgcaggatagcgctgatttggatagc
attgaggcggttgctaatgaagtgttgaacatggagatgccaagtagcccccagcagcta
cagaccctgacagaggatatccgtgagcgtgtggaaagcctttctgatgtagaggttatc
ttacaacaaagtgctggagacattgccagagctgagatgctgttagatgaagcaaataaa
gcaagcaaaagtgcaaaagatgttaaagtcactgcagctattgtgaaagaagcactggaa
gaagctgaaaaggcccaaaatgcagccgaaaaggccatcaaacaagctgacgaagacatt
agaggaacacaggacctacttacctcaattgaatctgaaaatgcagcatctgaagaaacc
ttaaacaacgctaccctacgtcttactgagctagagaagaacgtggaagatcttaaacaa
aagactgctacaaattcagagaatgtggaagagattgaagaaaccattgctactgtgaaa
caaaatgccgaagaagttaaagaggtacttgacagtgaactgaacgccaaatataaaacc
gttgaaaacctaattgccaaaaaaacagaagagtctgctgatgccaggaagaaagctgga
acgctgcagaatgaagctaaatcattgttagctcaagcaaacagcaaactccagctgctc
aaggatttggaaagcacatatgagaacaatcagaaagtcttggaagacaaagccaaacag
ttggtggaactagaagaaacagtacgctccctcttacaggcaatcagccagaaagttgca
gtatacagcacctgcttgtaa

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