Caretta caretta (Loggerhead turtle): 125630409
Help
Entry
125630409 CDS
T09292
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04510
Focal adhesion
ccay04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125630409 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125630409 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
125630409
NCBI-ProteinID:
XP_048692274
LinkDB
All DBs
Position
1:311454027..311523663
Genome browser
AA seq
1786 aa
AA seq
DB search
MGCLQTYLGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLHRP
EPYCIVSHLQEDKKCFTCNSLFTFHETLNSDSHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCENSFPGVSTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRISFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCELCLDFYHDLPWRPAEGRHSNACKKCNCNGHSIQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPEREIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADNPLGCQSCACNPLGTLPGGNPCDSETGSCYC
KRLATGRHCEQCLPEHWGLSNDMDGCRPCDCDQGGAINNNCSSETGQCPCRPHMIGRQCN
EVESGYYFMSLDHYIYEAEEANFGPGVSIVERQYSQDRIPSWTGVGFVRVPEGAYLEFYI
DNIPYSMEYDVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPDDDNQTVSLSPGS
RYVVLPRPICFEKGLNYTVRLELPQYSSLDTEVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDMVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCNPQGSL
SSVCDSNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKSCECHVQGSVSSFCHPETGQCH
CFHGVYGRQCDRCLPGYWGFPSCPPCQCNGHTDDCDPYTGECLNCHDSTTGHNCERCLGG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPITLQIVCVCNVGYIGSRCDECASG
FFGDPEEIGGVCQPCQCNNNIDMADPGACDKQSGKCLKCLYQTEGENCQLCKYGYYGHAL
QQDCRKCVCNYLGTVREHCNSSEGCQCEKTTGQCQCLPNVTGQNCDRCAPRTWRLASGTG
CELCECDVAHSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGIQ
TPQCNRSTGLCVCKEGVEGPSCDKCTRGYSGIFPDCAPCHQCFALWDVIISELTNRTQRF
LERAKILKISGVSGPYQQTVNTVEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLAADV
TEKMAEIEDKLSVIALKSNNTDTHLRALETDAESLDHVVKELAEQLEFIKISDIRGALDS
VTKYFQMSLEAEERVNASSVHPDSLVELSAQTRQEVEDLISEQEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTPSGASCADSECGGLNCRTEEGEKKCGGPGCEGLVTVAHGA
WQKAMDFDRDILSALAEVEELSKMVSEAKQRADEAKQNAQKVLLKTNATKEQVDRSNEDL
RNLIKQIREFLMQDSADLDSIEAVANEVLNMEMPSSPQQLQTLTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLDEANKASKSAKDVKVTAAIVKEALEEAEKAQNAAEKAIKQADEDI
RGTQDLLTSIESENAASEETLNNATLRLTELEKNVEDLKQKTATNSENVEEIEETIATVK
QNAEEVKEVLDSELNAKYKTVENLIAKKTEESADARKKAGTLQNEAKSLLAQANSKLQLL
KDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctgcagacgtaccttggcgctctcctagggctgtgggccgccgccctggct
caggagcccgagtacagctacgggtgcgccgagggcagctgctacccggccaccggcgac
ctgctgatcggccgcgcctcgcagctgtccgccagctccacgtgcgggctccaccggccc
gagccctactgcatcgtgagccacctccaggaggacaaaaaatgtttcacctgcaattcc
ctgttcaccttccacgagactctcaactctgatagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgtctcaagctgtggtggcagtcagaaaatggtttggaaaatgtt
actctccagctggatctggaagctgaattccatttcactcatctcattatgaccttcaag
acattccgcccagctgcaatgctaatcgaaagatcatctgattttggaaaaacctggaaa
gtatatagatactttgcatatgactgtgagaactcctttcctggtgtttcaactggaccc
atgaagaaagtagacgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgctttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctattaaaaatcacaaatttaagaatcagtttcaccaagttacat
acgttgggagacaacctcttagattctagaatggaaatcaaagaaaagtactactatgca
atttatgacatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgca
ccagtagacggctttaatgaagaggtggaaggaatggtccacgggcactgcatgtgcaga
cataataccaaagggttaaactgtgaactgtgtttggatttctaccatgacttaccgtgg
agaccagctgaaggacgccatagtaatgcatgtaaaaagtgcaattgtaatggacattct
atccagtgccattttgatatggctgtatacatggcaaccggaaataccagtggtggagtg
tgtgatgactgccagcataacacaatgggacgcaactgtgaacaatgcaaaccattttac
tttcagcatccagagagagagatacgagatcctaacatttgtgagccatgtaactgtgac
ccacttggctcccaaaatggtggaatatgtgatcgctacactgacttctctgctggcctt
attgctggacagtgccgctgtaaattatttgtggaaggggaacgttgcgacctctgcaaa
gaagggttctatggattaagtgcagataatcccctgggttgtcaatcttgtgcatgtaat
cctttgggaactcttcctggagggaatccttgtgattcagagacaggaagctgctattgt
aaacgtctagcaacaggaaggcactgtgagcagtgtctgcctgaacactggggcctgagc
aatgacatggacggatgtcggccttgtgactgtgaccaagggggagcaataaacaataac
tgctcaagtgaaactggccagtgtccatgccggccccatatgattggacgccagtgcaat
gaagtagagtctggctattacttcatgtcattagaccactacatctatgaggcggaggaa
gccaactttggtcctggagtgagcatcgttgagcgccagtattctcaagatcgtatccca
tcctggactggagtaggatttgtaagagtccctgaaggggcatatctggaattctatatc
gacaatattccatattctatggaatatgatgttgtgattcgctatgagccgcagttacca
gatcactgggaaaaagctgttattacggtttcacgcccaggcaagattcctacaagtagc
cgatgtggtaataccgttcctgatgatgataatcagactgtatcattatctccaggctca
agatatgtcgtccttccacgacccatatgctttgaaaagggactgaattacactgttcgt
ctggagctaccacagtactcctccctcgacactgaggtggaaagcccatacacactcatt
gactcgctcgttcttatgccttactgcaaatcactggacatattcacggtggggggctca
ggcgaagatatggtcactaacagtgcttgggaaacatttcaaagataccgatgtctggaa
aacagcaggagtgttgtgaaaacccctatgactgacgtctgcaagaatattatttttagc
atctctgcactgttacatgagaccgcattatcttgccagtgcaaccctcaaggctcatta
agttcagtgtgcgactctaatggaggacagtgccagtgtcgtccgaacgttgttggaaga
agatgtgacagatgtgctcctggcacctttgggtttgggcctaatggatgcaaatcttgt
gaatgtcacgtacaaggttctgtcagttccttctgtcatcctgagactggccagtgccac
tgtttccatggagtgtatggccgccagtgtgataggtgcttacctggatattggggattt
ccaagctgtccgccttgccagtgtaatggccacacggatgactgtgacccatacactggg
gaatgtttgaattgccacgattccaccacgggacacaactgtgaaaggtgccttggtggc
tattatggagaccctgtcctgggatcaggagatcattgtcggccttgtccttgcccagat
ggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctattactctgcaa
attgtgtgtgtctgtaatgtgggatacataggaagcagatgtgatgagtgtgcttctggt
ttctttggagaccctgaagagataggtggagtctgccagccatgccagtgtaacaacaac
attgatatggctgacccaggggcctgtgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaattgccagctgtgtaaatatgggtactatggacatgcgttg
caacaggattgcagaaagtgcgtctgtaattacttgggaacagtgcgagagcactgcaat
agctcggaaggctgtcagtgtgagaaaacaaccgggcagtgccaatgccttcccaatgtg
accgggcagaactgtgatcgctgtgcaccacgcacttggagactggccagtggaactgga
tgtgaactgtgcgagtgcgatgttgctcattccttcgggccatcgtgtaatgagttcacg
gggcagtgtcagtgtatgcctgggtttggaggccgcacctgcagggagtgccaagagttt
ttctggggtgaccccaatgtggcatgccaagcttgtgattgtgatccccgtggaatccag
acacctcagtgcaatcgctccacggggctgtgcgtctgtaaggagggtgtcgagggaccc
agctgtgacaagtgcacccgcggctactctggcatcttccctgactgcgcgccatgccat
cagtgtttcgctctgtgggacgtcatcattagtgaactgaccaataggacacagcggttc
ctggagagagcaaaaatcctgaaaatcagtggggtcagtggcccttaccagcaaactgtc
aacactgtggaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagctgct
gagccccttaaaaacattggaaatctctttgaggaagcaggcaaactagcagcagatgtt
acagaaaagatggctgaaatagaagacaagctctccgtgatagcgttaaaaagcaataac
acggacactcacctgagggccctggagacagatgcagagagcctagaccacgttgtgaaa
gaactggcagaacaactcgagtttataaaaatctctgatatccggggagccttggatagt
gtcaccaaatattttcagatgtccctggaggcagaagagagggtcaatgcctccagtgtt
caccctgatagccttgtggaactgtcagctcagacacgacaggaagtggaagacttaatc
agtgagcaagaggcccagttcaaggcaaaacaagaagaacagtcacgccttctggatgaa
ctcgcaggcaagctgcaaagtctggatctttctgaagtggctgagaagacatgtggaact
ccctcaggggcttcctgtgctgactcagagtgtggcggtctgaactgccgaacagaggaa
ggagaaaagaaatgtggaggaccaggctgcgagggattggttactgtggctcacggtgcg
tggcagaaagccatggattttgacagagacatactcagtgccttggcggaagttgaagaa
ctctctaaaatggtctcagaggcaaaacagagagcagacgaagcaaaacaaaatgcacaa
aaagttttgctcaaaaccaatgccacaaaagaacaagtggacagaagcaatgaagatctg
agaaaccttattaagcagatcagggaatttctgatgcaggatagcgctgatttggatagc
attgaggcggttgctaatgaagtgttgaacatggagatgccaagtagcccccagcagcta
cagaccctgacagaggatatccgtgagcgtgtggaaagcctttctgatgtagaggttatc
ttacaacaaagtgctggagacattgccagagctgagatgctgttagatgaagcaaataaa
gcaagcaaaagtgcaaaagatgttaaagtcactgcagctattgtgaaagaagcactggaa
gaagctgaaaaggcccaaaatgcagccgaaaaggccatcaaacaagctgacgaagacatt
agaggaacacaggacctacttacctcaattgaatctgaaaatgcagcatctgaagaaacc
ttaaacaacgctaccctacgtcttactgagctagagaagaacgtggaagatcttaaacaa
aagactgctacaaattcagagaatgtggaagagattgaagaaaccattgctactgtgaaa
caaaatgccgaagaagttaaagaggtacttgacagtgaactgaacgccaaatataaaacc
gttgaaaacctaattgccaaaaaaacagaagagtctgctgatgccaggaagaaagctgga
acgctgcagaatgaagctaaatcattgttagctcaagcaaacagcaaactccagctgctc
aaggatttggaaagcacatatgagaacaatcagaaagtcttggaagacaaagccaaacag
ttggtggaactagaagaaacagtacgctccctcttacaggcaatcagccagaaagttgca
gtatacagcacctgcttgtaa
DBGET
integrated database retrieval system