KEGG   Caretta caretta (Loggerhead turtle): 125630581
Entry
125630581         CDS       T09292                                 
Name
(RefSeq) tubulin alpha-3 chain-like isoform X1
  KO
K07374  tubulin alpha
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04145  Phagosome
ccay04210  Apoptosis
ccay04517  IgSF CAM signaling
ccay04530  Tight junction
ccay04540  Gap junction
ccay04814  Motor proteins
ccay05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125630581
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125630581
  09143 Cell growth and death
   04210 Apoptosis
    125630581
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125630581
   04540 Gap junction
    125630581
  09142 Cell motility
   04814 Motor proteins
    125630581
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125630581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccay03019]
    125630581
   03036 Chromosome and associated proteins [BR:ccay03036]
    125630581
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccay04812]
    125630581
   04147 Exosome [BR:ccay04147]
    125630581
Messenger RNA biogenesis [BR:ccay03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125630581
Chromosome and associated proteins [BR:ccay03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125630581
Cytoskeleton proteins [BR:ccay04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125630581
Exosome [BR:ccay04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125630581
  Exosomal proteins of other body fluids (saliva and urine)
   125630581
  Exosomal proteins of colorectal cancer cells
   125630581
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 125630581
NCBI-ProteinID: XP_048692712
LinkDB
Position
1:332758417..332761265
AA seq 456 aa
MLCLHLARECISVHIGQAGVQMGNACWELYCLEHGIQPNGIICLEKSLGQADSSFGTFFS
ETGSGKHVPRALFIDLEPTVIDEIRTGTYRSLFHPEQLISGKEDAANNYARGHYTIGKEI
IDPVIDRTRKMADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVEFGKKSKLEFSVYPA
PRVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICNRNLDIEHPSYTNLNRLIAQI
VSSITVSLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIVSAERAYHEQLSVPEITNA
CFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCPTGFKVG
INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME
EGEFSEAREDMAALEKDYEEVGRDSAEEVEEGDDEY
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgctctgccttcatcttgcacgggagtgtatttctgtccacattggccaggccggcgtg
cagatgggcaatgcctgctgggagctgtactgtctggaacatgggatccagccaaatgga
atcatctgtttggagaagtccttggggcaagctgattcttcctttgggaccttcttcagc
gagactgggtcagggaagcatgtgcccagagcactgttcatagacctggaacccacagtc
attgatgagattcgaactgggacctaccgctccctgttccatcctgagcagctgatcagt
ggcaaggaggatgctgccaacaactatgcccgtggccactacaccattgggaaggaaatc
atagatcctgtgattgataggactcgtaaaatggctgaccagtgcagtggccttcagggg
ttcctggtcttccacagcttcggaggaggcacaggctctggattcacgtccctcttgatg
gagcgtctctcagtggagtttgggaagaagtccaagctggagttctcggtgtaccctgcc
ccacgggtctccactgcggtggtggaaccctacaattccatcctgaccacccacaccacg
ctggagcactcggactgttctttcatggtggacaatgaggccatttacgacatctgcaac
cggaaccttgatattgagcatccctcctacaccaacctgaacaggctgatcgcccagata
gtgtcctccatcactgtttccctgaggtttgatggtgccttgaatgtggatctcactgaa
ttccaaactaacttggtgccttatccccgcatacacttccccctcactacctatgccccc
atagtctctgcagagagagcttaccacgagcagctctcggtgcctgaaatcaccaatgct
tgctttgagttctccaaccagatggtgaaatgtgaccctcgccgaggcaaatacatggct
tgctgcctgctgtaccggggggatgtggtgcccaaggatgtgaatgcagctatagcagcc
atcaaaaccaggaggtccatccagtttgtggactggtgcccaactgggtttaaggtgggc
atcaattaccagccccccacggtggtgccggggggagacctggctaaagtgcagcgggcc
gtctgcatgctgagcaacaccacggctattgcagaagcctgggcccggctggatcacaag
tttgacctgatgtatgcgaaacgggcctttgtgcattggtatgtgggggaggggatggag
gagggggagttctctgaagccagggaggacatggccgctcttgagaaggactatgaggaa
gttggcagggactctgctgaggaggtggaggaaggtgatgacgaatattaa

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