Caretta caretta (Loggerhead turtle): 125630864
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Entry
125630864 CDS
T09292
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125630864 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_9
LRR_LRWD1
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
125630864
NCBI-ProteinID:
XP_048692962
LinkDB
All DBs
Position
2:264676988..264921649
Genome browser
AA seq
1987 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQL
DLGGNDLEMLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPSEV
SGLMALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLAAVTESIGDCENLSELILTEN
VLTALPKSLGKLTKLTNLNVDRNRLTALPSEIGGCASLNVLSLRDNRLVLLPPELASTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDKTGEKVLTCYLLPQQP
SPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKADDDEEAGAEKRGLQRRATPHPSELK
VMKKVIEVRRNEVYSAKPDVDLDSPNSEEKRLSAMSNRSEDSHVSNSTVSANFREEEEEG
GGGDRLNGQVPKTQELENEAKSGAEEEQEVEAVAGQEEELEVEYNEPTVHFAEDTLIRSE
DEEEDEDRPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDRVPEEEELVG
CNNNAEPEEQEEAWDKDDMKNGALSTQPSVKGVSFDQANNLLIEPARIEEEELTLTILRQ
TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALHRAEHH
VAVEALRGSGSSVSMMVLRERMVEPENAITVTPLRPEDDYSPREPRGGLRFPERPEGAPP
TDRFSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGTLHVGDRVIS
INGVDMTEARHDQAVALLTASSPTIALLVEREGAQQLSEGDSPVVQRVRTHSPPPPPSHG
ESTPEETPLLQRNHLPKCLEDQYPIEEICLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVF
ISKVIPHGLASRSGLRVGDRILEVNTIDLRHATHQEAVNALLSSTQELSMLVRRDPPPPG
MQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGLRI
LEVNHQSLLGMTHTEAVQILRSVGDKLLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGR
KNSLESISSIDRDLTPEELEILQKEMEMVREATQWEREEMEKVERMRREREAATQLLEEE
AESISSEPLRLDYRTLAALPSNNSPRVTRALVQCDRASPGMESDCALLPLPVALDSQNSD
PDPIAGLSRSVTSPPQDPASPGKHTERAALVPLHMPEPVGCPLTQNQLPKPQEPEQESMV
DSQPILFSENPFVVANRRGKAAGKACLGGPPLGYGQGGVLKTNLYSKAPAGESEPGSSRR
DASYSPSSQQPPAALRPAHLSGRETRFAAINFIPPQDDSKSQTKPGVIQPLSRVRQNVAP
PSSEGRDSPNPFQQPESCSSVQNSLRPPSPPSPEDVPVNVKQAYKTFAAVPLSQANKETH
GQTSTEKPKASPEMMSSRGLHSPEQRSFRERQKYFEIEVKQQQVEKPPKRVSLVGEDDLK
KMKEEEARKLQQKRALLLEEEDEEEEEDVGKQMPDMSMQSSVIIEGVEYKIKRLNGRSIQ
SPATRISEADEHSSSQRNSLEEGFKPEQRPNSMSGLIPVYPGGGETGAPVRTAKAERRHQ
ERLRMQSPEFLSTQEKELSPAERRALEAEKRAMWRAARSSTLEDSIKQYEQDLARKLYQS
RQRAPAPGARPAQVSSPVQSHVSRTPGSGSQSRMKSLEQDALKAQMVIAKSKEGKKRSTL
EQLAESPSPAPTPSPTLPEDCSHRNVTSPGRLSMSEKKFDYREFAAIPSSKPVHEIQSPE
AAGNLRYVDDTNSTVPQDQDEPAEEEELLVTHDSSTPTTSALEEMALYSSKRKLRHSRRS
LEAAVPT
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctgtggcgctgtaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctggag
gagctgctgctggacgccaaccagctgcgggagctgcccaagcctttcttccggctcctg
aacctgcgcaagctaggcctgagtgacaatgagattcagaggcttccccccgaggtggcc
aacttcatgcagctggtggagctagacatctctcgcaatgacattccagaaatccctgaa
agcatcaaattctgcaaatccctggagattgctgacttcagtgggaatcccctctccagg
cttcctgagggcttcacccagctgcggagtctgggccacctggccctgaatgatgtgtcc
ctgcagagcctccccagtgatatcgggaatttggcaaatctggtgactctggagctgcgt
gagaacctgctcaagtccctccccacttcgctctcattccttgtcaagttagagcagttg
gatcttggtggcaatgacctggaaatgctgccagacactctgggagcattaccaaacctg
cgggagctctggctagaccgaaaccagctctcggccctgcccccggagctggggaatctt
cggcgcttggtctgtctggatgtgtctgagaacaagctggagcagctgcccagtgaggtc
agcgggctaatggcactgacagacctactgctgtcacagaaccttttggaatgcatacct
gatgggattggtcagctgaagcagctttccatcctaaaagtggatcagaatcggctggct
gcggtgactgagtcgattggggactgtgaaaatctctcggagctcatcctgacagagaat
gtgctgacagccttgccaaaatccctggggaagctgacaaagttgacaaatttgaatgtg
gaccggaaccggctgacagcgcttccctctgagattgggggctgtgccagtctgaatgtt
ctgtccctgcgtgacaaccgcctggtgcttctgcctccagaacttgccagcaccacagag
ttgcatgtgctggatgtggcagggaacaggctgcagaatttgccctttgccctgacaaat
ctcaacctgaaggccctgtggcttgcagagaaccagtcccagcccatgctgaaattccag
acagaagatgataagacgggcgaaaaggttctcacctgttacctgctgccccagcagccg
tctcccagtctagagaatctcctgcagaacagcgtggatgaaagttggacagacaccaac
ttgaaccgggtcagtgtgattcagtttttggacgagcccaaagctgatgatgacgaggag
gctggagctgagaagagaggcctgcagcgcagagcaactcctcaccctagtgagctgaag
gtcatgaagaaagtgatcgaagttcggcgcaatgaggtatattctgcgaagcctgatgtg
gacctggattctccaaactcagaggagaagaggctgagtgccatgtccaatcgcagcgag
gactcgcatgtctccaacagcactgtctctgccaacttcagggaggaagaggaggagggg
ggagggggagacaggctgaatgggcaagtgcccaaaacacaggagctggagaatgaggcg
aagtctggagctgaagaagagcaagaggtggaggcagtggctggtcaagaggaggagctg
gaagtggagtacaatgagcccacagtgcattttgctgaggacactctgatccggagcgag
gatgaggaagaggatgaagaccgcccgttcccagtggagaagcagcggctgatccgcaag
gacacaccgcactataagaaacactttaagatcaccaagctgcccaagccagaggcagtg
gtggcgctcctgcaggggctgaacagtgacagggtccctgaggaggaggagctggtgggc
tgcaataacaatgcagagcctgaggagcaggaggaggcctgggacaaggacgatatgaag
aacggagccttgtccacgcagccgtcagtcaagggggtgtcgtttgatcaagccaataat
ctgctgattgagcctgctcgcattgaggaggaagagctgaccctgactatcctgcggcag
acgggggggctgggcatcagcatcgcagggggcaaaggctccactccctacaagggtgat
gacgagggcatctttatttcccgtgtgtcggaggagggccctgcagcccgagcaggagtc
cgtgtcggggacaagctcctggaggtgaacggagtggccctgcaccgtgcggagcaccac
gtggcagtggaggcgctgcgtggctcaggcagctccgtctccatgatggttcttcgggag
cggatggtggagcctgagaacgccatcacggttacaccgctgcgccccgaggatgattac
agcccacgagagccacggggcggccttcgctttccagagcgacctgagggggcaccaccc
acggacagattctccacctgcctcatgcgcaatgagaaggggctgggcttcagtattgct
gggggcaagggctccacgccctaccgggcgggtgacacggggatctttatctcgcggatc
gcagagggtggtgcggcccatcgggacgggacgctgcacgttggagaccgggtcatctcg
atcaatggggtagacatgacagaagccaggcatgatcaggcagtagcgctgcttaccgca
tcctcccccaccatcgcgctgctggtagagagagagggtgcacagcagctcagcgaggga
gactcaccagtggtacagcgagtgcgcacgcactccccaccaccacctcccagccatggg
gagagcacacccgaggagacgcctctgctacaaaggaaccatctgcccaaatgcctggag
gatcagtaccccatcgaggagatctgtctggtcaaagctggggggcccctggggctcagc
attgttggaggcagtgaccattcaagccacccgtttgggattcatgaaccaggtgtcttt
atctcaaaggtcattccccatgggctggcatcccgcagtggcctgcgagtaggggacagg
atcctggaggtgaatactattgacctgcgccatgctacccaccaggaggctgtgaacgcc
ctgctgtccagtacacaggagctgagcatgttggtgcgacgagatcctccgccacctggc
atgcaggaaatctgcattgagaaggctcctggagaaaagctgggcatcagcattcggggg
ggagcgaaaggccacgctgggaacccctttgaccccaccgatgagggcattttcatctcc
aaggtgagctcctctggggctgctgctagggatggccggctgaaggtggggctgcggatt
ctggaggtgaatcaccagagcctgctgggaatgacgcacacagaggcagtgcagatccta
cgcagtgtgggtgacaagctccttgtgcttgtgtgtgatgggtttgaccccaaagccgca
gctgccattgagatgtccccaggaatcattgccaacccctttgccgctggcattggccgc
aagaatagcctggaaagcatctcctccattgaccgtgacctgaccccagaggagctggag
atcctacaaaaggagatggagatggtgagggaggcgactcagtgggagagagaagaaatg
gagaaagtggagaggatgcgtagggagcgggaggcagccacgcaactccttgaggaggag
gcagagagcatcagcagtgagcctttgcgactggactatcggaccctggcagctttgccc
agcaacaactcaccaagagtcacccgtgctctcgttcagtgtgatcgagccagccctgga
atggagagtgactgcgctctgctgcctctgccagtggctctggacagccagaattcagac
cctgacccaatcgcaggcctgagccgcagtgtaactagcccgccccaggacccagcatca
cctggcaagcacacagaaagggcagcgctggtcccgctacacatgccggagcctgtgggc
tgccccctaacccagaaccagctgccaaagccacaggagccagagcaagagagtatggtc
gactcccaaccaatcctcttcagtgagaacccctttgtggtggctaatcgaagggggaag
gcagcaggcaaggcctgtctggggggccctccccttggctatggccaggggggcgttctg
aagaccaacctttactccaaggctccagcaggcgagtctgagcctgggagctccaggcgg
gatgcctcttactcaccgagcagccagcagccacctgcagcccttcggcctgctcacctg
tcaggcagggagactcgctttgctgccataaacttcatcccaccgcaggatgacagcaaa
tcacagaccaagccgggcgtcattcagcctctctcccgtgtgcgacaaaacgtggcccca
cctagttcggagggcagggacagccccaaccccttccagcaacctgagtcatgctccagt
gtccagaactctctgcgtcccccctctcccccctctcctgaggatgtcccagtcaatgtc
aagcaggcatacaagacctttgcagcagtgcccctgtcgcaggcaaataaggagacgcac
ggtcagacaagcaccgagaaacctaaagcttctcctgagatgatgtcgtccaggggactg
cacagcccagagcagcgatccttccgtgagaggcaaaagtactttgagatcgaggtgaag
cagcagcaggtggagaagccccccaagcgtgtctccctggtgggggaggatgacctgaag
aaaatgaaggaggaggaagctcgtaaactgcagcagaaacgggctctgctgttggaggag
gaggatgaggaggaagaggaggatgtggggaagcagatgcccgatatgagcatgcagtcc
agtgtcatcatcgaaggagtggagtacaagatcaagagactaaatggaaggagcatccag
tccccggcaactcggatctctgaggcggatgagcacagcagctcccagagaaactcactg
gaagaaggattcaagcccgagcagagacctaactctatgtctggactgatcccagtttac
ccaggagggggcgagacaggggcacctgtgcgaacggccaaagctgagcgacggcaccag
gagcgattgcggatgcagagccctgaattcctgagtacccaggagaaggagctgtctcca
gctgagcgccgggccctggaggcagagaaacgagccatgtggagggcagcacgctcctcc
actcttgaagacagtattaaacagtacgagcaggatctggccaggaagctctaccagtcc
cgacagcgggcacctgcaccaggggccaggccagctcaggtgtctagcccagtgcagagt
cacgtctcaagaacccctgggtcaggaagtcaatccaggatgaagtctctggagcaggat
gccctcaaagcccagatggtgattgccaagtccaaggaggggaagaagcgcagcacactg
gaacagctggctgaatcgccttcacctgctcccaccccgtccccaacgcttccagaagat
tgcagccacaggaatgtcacttcaccagggaggctgtccatgtctgaaaagaagtttgac
taccgggaatttgccgctattccttcttccaaacctgttcacgaaattcagtcacccgaa
gcagctggcaatctcagatacgtggatgacacaaatagcacagttccccaggatcaggat
gagccagcagaggaagaggagctgttagtaacgcatgactcctcaacacccaccacatca
gcacttgaagaaatggctctgtacagcagcaagcgcaaactccgacacagccgtcgcagt
ctggaggctgctgtccccacatag
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integrated database retrieval system
