KEGG   Caretta caretta (Loggerhead turtle): 125631241
Entry
125631241         CDS       T09292                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    125631241 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccay01002]
    125631241 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ccay00536]
    125631241 (SHH)
Peptidases and inhibitors [BR:ccay01002]
 Cysteine peptidases
  Family C46: hedgehog family
   125631241 (SHH)
Glycosaminoglycan binding proteins [BR:ccay00536]
 Heparan sulfate / Heparin
  Morphogens
   125631241 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Ribosomal_S6e Vint
Other DBs
NCBI-GeneID: 125631241
NCBI-ProteinID: XP_048693559
LinkDB
Position
2:complement(19589546..19608945)
AA seq 431 aa
MDEMLLLTRILLVGFLCVLLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKRVRDLSPGDRVLAADAQGRLLYSD
FLAFLDRDHGAPKLFYVIETRQPRARLLLTAAHLLFVAPPHNHSQPQPQPGAARSRALFA
SRVRPGQRVYVLGEGGRRLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIE
EHSWAHWAFAPFRLAHALLAVLSPSASLPAPPEAEPAPPGLHWYSRLLYRIGSWVLDSDS
LHPLGMAVQAS
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaattctgttggtgggcttcctctgcgttctcttg
gtctcctctgggctgacgtgtggaccaggcaggggtattggaaaaaggagacaccccaaa
aaactgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatctcaagaaactcggagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacactggagctgacagactg
atgactcagagatgcaaagacaagctgaacgccctggcgatctcggtgatgaaccagtgg
cccggagtgaagctgagggtgaccgagggatgggatgaagatgggcaccactccgaggag
tcgctgcactacgagggccgggccgtggacatcactacgtcggacagggaccgcagcaag
tacggcatgctggctcggctggcggtagaggctggcttcgactgggtctactacgagtcc
aaggcccacatccactgctccgtcaaagcggagaactcggtggccgccaagtcgggcggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcaccaagcgggtgcgggac
ctgagccccggggaccgcgtgctggcggcggacgcgcagggccggctgctctacagcgac
ttcctggccttcctggaccgcgaccacggcgcccccaagctcttctacgtgatcgagacg
cggcagccgcgggcgcgcctgctgctcaccgccgcccacctgctcttcgtggcgcccccg
cacaaccactcccagccccagccccagcccggggcggcccgcagccgcgcgctcttcgcc
agccgcgtgcggccgggccagcgggtctacgtgctgggcgagggcggccggcggctgctg
ccggccgcggtgcacagcgtctcgctgcgggaggaggcctcgggggcctacgccccgctc
acggcccagggcaccatcctcatcaaccgggtgctggcctcctgctacgccgtcatcgag
gagcacagctgggcgcactgggccttcgcccccttccgcctggcccacgccctgctggcc
gtgctctcccccagcgccagcctgcccgccccgcccgaggcggagcccgccccgccgggc
ctccactggtactctcgcctcctctaccgcatcggcagctgggtgctggacagtgactcc
ctgcacccgctgggcatggccgtgcaggccagctga

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