Caretta caretta (Loggerhead turtle): 125631380
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Entry
125631380 CDS
T09292
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125631380 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125631380 (NUP98)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125631380 (NUP98)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125631380 (NUP98)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125631380 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125631380
NCBI-ProteinID:
XP_048693970
LinkDB
All DBs
Position
1:4143121..4201998
Genome browser
AA seq
1818 aa
AA seq
DB search
MFNKSFGTPFGGSAGGFGTTSTFGQNAGFGTTSGGAFGSSAFGSNNNTGSLFGNTQTKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSNSLFGTASTGGGLFSSQNNAFAQNKPAGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPAVAAAGLFGSSTATSSAATGL
FGSSTTNAGFSYGQNKTAFGTSTTGFGTGTAGSLFGQQPQQTTSLFSKPFGQATTTQNTG
FSFGNASTLGQPNTNTMGLFGATQASQSGSLFGTAANTNAATGFGTGTGTGLFGQANTGF
GVGGSTLFGKPAGFGTTTTSAPSFGTTSGSGLFGNKPTLTLGTNTNTSNFGFGASTAGNS
IFGNKPAAGTLGAGLGTGFGTALSAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLG
FGAPQPAVALTDPNVSAAQQAALQQHFNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNP
AAQKALTTPTHYKLTPRPATRVRPKALQTAGSSKSHLFDGLDDDEPSLSNGAFMPKKSIK
KLVLKNLNSSNLFSPVSREAEDLEPPSEYPENGERFNFLSRSVDENHRQEGEQEEEDDHH
EVTRFYTNPIAKPIPQTPENAVHKQNNVDDTIMALNMRVALRNGLEGSSEDASFHDESLQ
DDREEENENVYSLHPAGIVLTKAGYYTIPSMEDLAKLTTDRGECIVTDFTIGRKGYGSIY
FEGEVNLTNLNLDEIVHVRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRCL
IKSPERLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHP
SKVDAKKLKTAQVPSQGQLVPQQMALNGKPTPPAQSPEVEQLGRVVELDSDMADITQEPA
QDSILEDSITEEPELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQPT
KMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKFASVSFLPSGSLQDFRGPRTSSLGNP
SSAASWSGLSTLPSAFSMPSAAPEVQLKTVGACRQQGLIPLEKSVTYGKGKLLMDMALFM
GRSFRVGWGPNWTLVNSGDKLSGSSEPEDLRNDSMEYGFLPTPVAPKSLLESPFKVHIEK
LTLERRKTDGDQQLYLIPLEIKLKNSTVHVDECCPLLAANPGVSAIHDYADWVKDFCGDS
GEIEPVVKYWCLTWMLCEAIWGHLKELEASLEEPSEYIVALERRKAFSRWLSQTAAARIE
EEVSLSQYENHIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQL
VDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRTIAIHLWYLLPPT
ASISKALNMYEAAFQNTTECEKYACCPLPSYLEDSGCVLEEDDSAKRPLRDVCFHLLKLY
SDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLESE
GFWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTKETFLIQKLCIPPEWIHEA
KAVRARMEGDKHKEALYLFKAGHWNQCHKLVIRHLASDAIINENYNYLKGFLEDLSPPER
STLIQDWDMAGLVYLDYIRVIEMLDRIQQLDCSAYELERLHTKVTSLCNRIEQIQCHNAK
DRLAQSDMAKRVANLLRVVLSLQHSPEPASDSTPDVQRVPLRLLAPHIGRLPMPEDYALE
ELRSLTQSYLRELTVVTQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccgtttggaggcagcgctggtggctttgggactact
tcaacatttggacaaaatgcgggctttggtactaccagtggaggagcgttcggatcatca
gcctttgggtcaaacaataacacaggaagcctctttgggaacacacagactaaaccagga
ggattgtttggttcaagtacgtttagccagccagccacctcctccacaagcactggcttt
gggtttggaacatcaactggaacttccaacagcctgtttgggactgccagcactggtgga
ggtctcttttcatcccagaataatgcctttgctcagaataaaccggctggatttggaaac
tttggaacgagtaccagcagtggaggtctctttggaaccactaacactgcctccaatcct
tttgggggtacatctggctctctctttgggccaactagctttactgctgctccaactggg
actaccattaaatttaatccaccaaccggcacagatactatggtaaaatctggagttagc
actaacatcagcactaagcaccagtgtattactgctatgaaggagtatgaaagcaaatcc
ctagaggaactccgtttggaagattaccaggcaaacaggaaagggccctcaaatccagcg
gtagcagctgcggggttatttggatcctccacagctacatccagcgcagctactggactg
tttggctcctccaccactaatgcaggtttttcatatggacagaataaaacagcttttgga
accagtacaactggctttggaacaggaacagcagggagcctttttggtcagcagcctcag
cagactaccagtctgttcagcaaaccatttggccaggccaccacaacacagaacactggc
ttttcttttgggaacgccagtactcttggacaaccaaatacaaacacgatgggtttattt
ggggcaacccaagcctcacagtctggaagcctttttggaacagctgccaacacaaatgct
gccactggatttggaacaggaactggaactggtctctttggacaagccaacacaggattt
ggtgttggcggttcgacgctgtttggtaagcctgctggattcggaaccaccacgaccagt
gctccttcgtttggtacaacttctggcagcgggctctttggtaacaaaccaaccctgact
ttaggaaccaatacaaacacttccaattttggttttggtgcgagcactgctgggaatagt
atcttcggaaataagcctgcagctggaactctgggcgccggacttggaacaggatttgga
acagctcttagtgcagggcagacttcactattcggaaacacccagcctaaattaggtgga
acactgggaacaggagcgtttggagcacctggattcaatacatcaacagccaccctgggc
tttggagctccccagcctgctgtggcattgacggacccaaatgtttcagctgcccaacaa
gcagccctccagcagcacttcaacagcttgacctactcgccctttggagattctcctctt
ttcagaaaccctatgtcagacccaaagaagaaagaagagagactgaaaccaactaatcca
gcagcccagaaggctttgacgacgccaacccattataaactgaccccgcgaccagcgacc
agagtgcgaccaaaagctttgcagacagcaggatcttccaaatctcacctctttgatggg
ctggatgatgatgagccatctttatctaacggtgcattcatgcccaagaagagcatcaag
aagctggttttgaaaaacctcaacagcagcaacttgttttctcctgtcagtcgtgaagct
gaagatctggaacctccatcagagtatccagagaatggagagcggttcaactttctatcc
agatctgttgatgagaatcacagacaggagggtgagcaagaggaagaagacgatcaccat
gaagtgactagattttacactaaccccattgccaaacccatcccacagaccccggagaat
gcagtgcacaaacagaataatgtggatgataccattatggctctgaatatgcgggttgcc
ttgcggaatggcctggaaggcagcagtgaagacgcttcatttcatgatgagtcactgcag
gatgaccgtgaagaggagaatgagaatgtatatagtctgcacccagcaggaattgttcta
acaaaagctggctactataccatcccgtctatggaggatctagctaaacttaccactgac
agaggagaatgtattgtgactgatttcactataggtcgtaaaggttacggatcaatttac
tttgaaggagaggtgaatctaactaacttaaatctggatgagattgtgcacgtccgcagg
aaagaagttattgtctatcctgacgatgatcagaagccacctattggtgaaggtttaaat
agacgagctgaagttacattggatggagtttggccaacggataaaacatctcgctgcttg
ataaagagcccagaacgactagcagatatcaattatgaaggcagactggaggctgtatct
cggaagcagggagcccagttcaaagagtaccgtccagagaccggttcttgggtgttcaag
gtggctcacttctctaaatacggcttgcaagattctgatgaggaagaggaggagcatcct
tcaaaagtggacgcaaagaagttaaaaactgcccaagtgccatcccaggggcagctggtg
ccccaacaaatggctctaaatggcaagccaacgcctccagctcagagcccggaagtggag
cagctgggaagggttgtggaactggacagtgatatggccgacatcacccaggaaccagct
caggattcaatactagaagatagcattacagaagagccagaactggtgcctgcttcgaca
cacattgcatcttcacttggtataaacccccatgtcttacagattatgaaagcttccttg
cttgctgatgaagaggatgtagacttgatcctggatcatcactttggcaaacagcctaca
aaaatggatacttctcaagagatctgctctcccaggcttccaatttcagcattgcaagga
cagaaaagacactcctcagttggagggctgctgcaatcaaaatttgcaagtgtgtctttc
ctcccgagtggttctctgcaagattttcgtggaccaagaacttcctctttaggcaatcct
tcatctgcagcctcttggtcggggctttccaccttaccctctgcgttctccatgcccagc
gcagctccagaggtgcagctgaaaacagtgggtgcctgtaggcagcaggggctaatacct
ctggaaaaatctgtcacttatggaaaaggaaaactcctaatggatatggcactcttcatg
ggacgctcatttcgcgttggttggggacccaattggactcttgtaaatagtggagataaa
ctgagtggatcaagtgagcccgaggatcttcgcaatgactctatggaatatggattcttg
ccaactcctgttgctcctaaatcacttttagaatctcccttcaaggttcatatagagaag
ctgaccttagaacgaaggaagacagatggagaccagcagttgtacctcatccctctggag
ataaagctcaaaaacagtactgtccatgtagatgaatgttgtcctctcttagcagccaac
ccaggagtgtctgccatccatgactatgctgactgggttaaagacttttgtggagactcg
ggggaaatagaacctgtggtgaagtactggtgtttgacatggatgttgtgtgaggcaatc
tggggccacctgaaggagttggaagccagcttggaggagcccagtgagtacattgtagcc
ctggagcgcaggaaagccttctcccgctggttatcgcagactgcagcagcacgaattgaa
gaggaagtctcactgtctcagtacgagaatcacatagaggctgtgtttagctaccttaca
gggaagaggatcagtgaggcttgtagggtggcacagcaatcaggagatcacaggcttgcc
ctactcctctcccagttggtaggcagccagcaggttcgggagctcctcacaatgcaatta
gtggactggcatggattgcaggcagactgcttcatccaggaggagaggttgcgcatcttt
gctctgctggctgggaagcctgtgtggcagttgtctgaaagaaaaagcattaatgtgtgc
tcacagctggactggaagcgtactattgctatccacctctggtatctgcttccaccaacg
gcttctatttcaaaggcactcaacatgtacgaggcagcattccagaacaccacggagtgt
gagaaatatgcctgctgtcccctgccttcctacctagaggattctggctgtgtacttgag
gaagatgacagtgcaaagagacccctgagagatgtctgctttcacttgttaaagctctac
agcgacagatgctatgatctcaatcagctgcttgaccccagaagtataacatccgacccc
ttagactaccgtcttagttggcacctgtgggaagtacttagagccttgaattacactcat
ctatcagagcagtgtcagggagtcctgaatgccagctatgctgcccagcttgaaagtgaa
ggattttgggaatgggccatttttgtactgctgcatacatccaatacacacacacgtgag
aaagcagtgcgtgaattcttaaaccgccactgcgtgctgtcggaaacgccagaatcctgg
acaaaggagactttcctgatacaaaagctctgcattccaccagaatggattcatgaagct
aaggcagttcgggcaagaatggagggagataagcataaagaggccctctacttgttcaaa
gctggacactggaaccagtgtcacaaactggtcatcaggcacttagcctcagatgctatt
attaatgaaaactacaactacctaaaaggattcctagaagatttgtcccctccagagcga
agtacactcatccaggactgggacatggcggggctggtttatttggactacatccgggtc
atcgagatgctcgacaggattcagcagctggattgttctgcatatgagttggagaggtta
cataccaaagtgacatcgctatgcaacaggatagaacagatacagtgccacaatgccaag
gaccgattggctcagtctgatatggccaaacgtgttgctaacctgctgcgggtggtcctg
agcctacagcattctcctgaacctgcctctgactccacgcctgacgtgcagcgtgtcccc
cttcgtctgcttgctccccacattggccggcttcccatgccagaggactatgccttggag
gagctgcgcagtctcacacagtcgtatctacgagaactgactgtggtgactcagtga
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integrated database retrieval system
