Caretta caretta (Loggerhead turtle): 125631385
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Entry
125631385 CDS
T09292
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125631385 (TRDMT1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
125631385 (TRDMT1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125631385 (TRDMT1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
125631385
NCBI-ProteinID:
XP_048693980
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Position
2:41510569..41552159
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AA seq
400 aa
AA seq
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MGPVRVLELYSGIGGMHQALRESCISAEVVAAVDVNTVANEVYKHNFPSTPLWAKTIEGI
TLAELNRLSFDMILMSPPCQPFTRIGLQGDVSDPRTNSFLYILDILPRLQRLPKYILLEN
VKGFETSSARDKLVETLKKCGFKYQEFLLSPTYLGIPNSRLRYFLIAKLQSELLSFQAPG
QILENFPDQEPKASVKHRVAAGLEKESSFTSPEEEHIEPNSGSDAGSGQCSQKEAFVFKL
ETAKEMERKRNQDSDLSIQMLKDFLEEDGEEMSQYFLPPKALLRYAFLLDIVTPSCRRST
CFTKGYGHYVEGTGSVLQTAEDVQLESVFKSIEMLSEEEKLMKLSTLKLRYFTPREIENL
HGFPPEFGFPDKITMKQRYRLLGNSLNVHVVAKLISLLTG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggggccggtgcgcgtgctggagctgtacagcggcatcggtgggatgcaccaggcgctg
agagaaagctgtatatctgcagaagtcgttgctgctgttgatgtgaacactgttgctaac
gaagtgtacaaacacaactttcccagcacgccattgtgggcaaagacaattgagggcata
acactggcggagttaaacagattatcttttgatatgattttgatgagtcctccatgtcag
ccatttacaagaattggcctgcaaggtgatgtatctgatccaaggacaaacagttttctt
tacatccttgatattctcccaaggctccagaggctgccaaaatatatacttttagaaaat
gtgaaaggatttgaaacgtcttctgccagagacaaacttgtagaaacactaaagaagtgt
ggatttaaataccaagaatttctcttgtctccaacataccttggcattcccaattccagg
ctgcgatattttctgattgcaaagcttcagtcagagttactttcctttcaagctcctggt
cagatattggaaaatttcccagatcaggagccaaaagcttcagtgaagcacagagttgct
gcaggcttggaaaaagagagctccttcacgtcacccgaagaggagcacattgagccaaac
tctggttctgatgctggcagcggacagtgttcgcagaaggaagcgttcgtttttaaactt
gaaacagcgaaagaaatggaaagaaagcggaaccaggacagtgatctctctattcaaatg
ctaaaagacttccttgaagaggatggagaagaaatgagtcagtacttcttgccaccaaag
gccttactgcgctatgctttcctgttagacattgtgacacccagctgcaggagatccact
tgcttcacaaaagggtatggtcactatgtagaaggaacgggctcagtgctgcagacagca
gaggatgtgcagctagaatcagtgtttaaatccattgagatgctatcagaagaagagaag
cttatgaaattgtcaacactaaaactaagatattttactcctagagaaatagaaaatctc
catggattccctccagaatttggctttcctgacaagataacaatgaagcaacgctaccgt
ctcctgggaaacagtctcaatgtacatgtagtggctaaactgatctcacttctgactgga
tga
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