Caretta caretta (Loggerhead turtle): 125631396
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Entry
125631396 CDS
T09292
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125631396 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125631396 (ABCB1)
Enzymes [BR:
ccay01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125631396 (ABCB1)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125631396 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Rad17
AAA_5
AAA
Zeta_toxin
DUF87
AAA_30
AAA_29
AAA_15
DUF815
G-alpha
AAA_7
AAA_14
nSTAND1
AAA_24
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
125631396
NCBI-ProteinID:
XP_048694004
LinkDB
All DBs
Position
2:complement(43072770..43176859)
Genome browser
AA seq
1271 aa
AA seq
DB search
MGTENERTSDVNGRAGNAAVPDQDCESKSKCNEDKKQPKKPNVVSPLTMFRYADWLDKLL
MVLGSALAILHGAALPAMMIIFGDMTDSFVIPRNLSSGNISFNPYEKLEEQMSRYAYYYS
GIGAGVLIAAYIQVAFWTLAAGRQIKKIRQQFFHSIMRQEIGWFDVNDVGELNTRLIDDV
SKINEGIGDKIGMLFQAIATFLAGFIVGFIKGWKLTLVILAVSPVLGLSAALWAKILSAF
TDKELTAYAKAGAVAEEVLAAIRTVIAFGGQKKEIKRYHKNLEDAKNIGIKKAITANISM
GIAFLLIYASYALAFWYGTTLVLSDDYSIGKVLTVFFAILIGAFSVGQTAPGMEAFANAR
GAAYAIFNIIDNEPQIDSFSETGYKLDNIQGNLEFHNVYFNYPSRQDVKVLKGLNLKVNC
GQTVALVGSSGCGKSTTVQLIQRFYDPEKGMITIDGHDIKTLNLRYLREIIGVVNQEPVL
FATTIAENIRYGREDVTMEEIEKAVKEANAYDFIMKLPDKFETIVGERGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESESVVQTALDKAREGRTTIVIAHRLSTVRNADLIA
AFEGGVITEQGTHRELMKTNGIYCKLVNMQTIGTEVQSEEAGTTTEVALKESIGNGLRRR
LTRKSTKKSEIQDDSLDVKIVQPDENVPPVSFLKVMKLNKSEWPYFVVGTFSAIINGALQ
PAFAIIFSEIIGIFAEPDKTVLRNKSNLYSLLFLAIGIISFVTFFLQGFTFGKAGEILTM
RLRFMAFKAMLRQDISWFDDPKNSTGALTTRLANDASQVKGATGARLALITQNIANLGTG
IVISFVYGWQLTLLILAIVPVIAIAGIIEMKIFSGHAKKDKEELEAAGKIATEAIENIRT
VVTLTQERKFEFMYGQNLQGPYRNSVKKAHIFGLSFGLTQAIMYFTYAGCFRFGAYLVGN
GYMEFKSVFLVFSAIVFGAMALGQTSSFTPDYAKAKMSAAHLFTLFERAPLIDSYSDEGL
KPDIFEGNIAFKEVTFNYPTRPDVQVLQGLNIKVEKGQTLALVGSSGCGKSTVVQLLERF
YDPLGGEMLLDGQNAKLLNIQWLRAHIGIVSQEPILFDCSVAENIAYGDNSREVSSEEIV
NAARAANIHSFIDSLPNKYNTCVGDKGTQLSGGQKQRIAIARALVRHPQILLLDEATSAL
DTESEKVVQEALDKARQGRTCIVIAHRLSTVQNADKIAVIQNGKVVEQGTHQQLLAERGI
YYSLVNVQAGP
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaacgaaagaacgtctgatgtgaatggaagagctggtaatgctgctgta
ccagaccaggactgtgaatccaaaagcaaatgcaatgaggacaagaagcagccaaagaaa
cctaatgtggtcagcccattaacaatgtttcggtacgctgattggctggataaattacta
atggtgctaggctctgcccttgcaatccttcatggagcagctctcccagccatgatgata
atctttggagatatgacagatagttttgttattccacgaaatctatcttcagggaatatt
tcttttaatccttatgagaaactggaggaacaaatgtccagatatgcatactattattct
ggaataggagctggtgttctaattgcagcctacatacaagttgcattttggacactggca
gctggacggcaaattaagaaaatcagacaacaatttttccactcaataatgcgacaggaa
attgggtggtttgatgtgaatgatgttggggaactcaacactcgacttatagatgatgtc
tccaaaattaatgaaggaattggtgacaaaattggaatgctctttcaggcaatagctaca
tttctcgcaggatttatagttggtttcataaaaggatggaaattaacccttgtaatactg
gcagtcagtcctgtcctgggactctcagctgctctctgggcaaagatactctctgcattc
actgacaaagaactaactgcatatgcaaaagcaggagctgttgcagaagaagttctggca
gcaattcggactgtgatagcttttggaggacagaaaaaagaaatcaaaaggtatcataag
aatttagaagatgccaaaaacattggaatcaagaaggctattacagccaacatttctatg
ggtattgctttcttactgatatatgcatcatatgcattggcattttggtatggaaccact
ttggtgctatctgatgattatagtattggaaaagtccttacggtcttttttgctatatta
attggagcatttagtgttggacagaccgcaccaggtatggaggcatttgctaatgcaagg
ggagctgcctatgcaatctttaatatcatagacaatgaacctcaaattgacagtttttca
gagactggctacaaactggacaatattcaagggaatttggaattccacaatgtttacttc
aattatccatctaggcaagatgtaaaggtgttgaaaggcttgaatctgaaggttaattgt
ggccagacagtagccttggttggtagcagtggctgtgggaaaagtacaactgttcaactg
atccagagattttatgatccagagaagggcatgattactattgatgggcatgatattaag
accctaaatttaagatatctgagggagattattggtgtggtgaatcaggagcctgtgcta
ttcgctactactattgcagaaaacatccgctatggccgtgaagatgtcactatggaagag
attgaaaaagctgtcaaggaagccaatgcctatgactttatcatgaaactgcctgataag
tttgaaaccatagttggagaaagaggggcacaactgagtggaggtcagaaacagagaata
gctattgcacgagctctggttcgcaatcccaagattcttctgctcgatgaggcaacttca
gctttggacactgaaagtgaatcagttgtgcaaacagcactggacaaggctagagaaggc
cgcaccaccattgtaatagctcatcgcttgtctacagtccgaaatgcagatcttatagct
gcatttgaaggtggagtcatcacagaacaagggacccatcgtgaactgatgaaaacaaat
ggaatttactgcaaacttgtaaacatgcagacaataggaactgaagttcagtcagaagaa
gctggaaccaccaccgaagtggcactgaaagaatcaataggaaatggcttgagaaggaga
ttgactcgaaaaagcaccaaaaagtcagaaatacaggatgatagccttgatgtgaaaatt
gttcaacctgatgaaaatgtgcctccagtttcatttctgaaagttatgaagctgaacaaa
agtgaatggccttactttgtagttggaactttttctgcaattatcaatggagctttacaa
cctgcatttgcaataatattttcagaaattatagggatttttgcagaaccagacaagacc
gttctaagaaacaagagcaacttgtattcactgctatttttagcaattgggatcatttct
tttgttactttttttctgcagggtttcacgtttggcaaagctggagagatccttacaatg
aggcttcgattcatggcatttaaagcaatgcttagacaggacatcagctggtttgatgac
cctaaaaacagcactggggcattaactacaagacttgctaatgatgcctcacaagtgaaa
ggagctacaggtgccagactggctttaattacccaaaacatagctaaccttggaactgga
attgttatatcattcgtctatggctggcagctgacccttttgattttagccattgtgcca
gtcattgccatagcaggaatcattgaaatgaaaatattttctggacatgcaaaaaaggat
aaagaagaactggaagctgcaggaaagattgctactgaagccatagaaaatattcgaact
gttgttactttgacccaggaaagaaaatttgaatttatgtatggacaaaatttgcaagga
ccatatagaaattctgtgaagaaggcacatatctttggacttagttttggccttacacaa
gcaattatgtattttacttatgctggatgttttcggtttggtgcctatctagtgggaaat
ggatacatggagtttaaaagtgtgtttttggtattttcagctattgtatttggtgcaatg
gcactaggacagaccagttcatttactccagactatgccaaagccaagatgtcagcagca
cacttgttcacgctgtttgaaagagcccccttaatagacagttacagtgatgaaggactg
aagcctgatatattcgaaggcaacatagcattcaaagaagtgacgtttaactatccaact
cgaccagatgtccaagtgcttcaaggcttgaatattaaggtagaaaagggacagaccctg
gcgctcgtaggcagcagcggctgtggaaagagcactgttgttcagttgcttgagaggttc
tatgatcctcttggtggagaaatgctgctggatggccaaaatgcaaagttattaaatatc
caatggcttagagctcacattggtattgtctcacaagaaccaatcctgtttgactgcagt
gttgctgagaatattgcatatggagataacagtagagaggtgtcatctgaagagattgta
aatgcagcaagagcagccaacatacattccttcattgactctctgccaaataaatataat
acctgtgtgggagacaaaggaactcagctctcgggtggtcagaagcagcgtattgctatt
gctcgggctcttgtacgtcatcctcaaattctgctactggatgaagccacatctgctcta
gatacagaaagtgaaaaggttgtccaagaagcactggataaagcaagacaaggtcgcacc
tgtattgtaatagctcatcgcctgtccaccgtgcagaatgctgacaagatagcagtaatc
cagaatggaaaggtcgttgaacaaggaacacatcagcaactcttggctgaaaggggcatc
tactattctctagttaatgttcaagctggaccatga
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