Caretta caretta (Loggerhead turtle): 125631423
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Entry
125631423 CDS
T09292
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125631423
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125631423
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_3
YVC1_C
DUF6850
Motif
Other DBs
NCBI-GeneID:
125631423
NCBI-ProteinID:
XP_048694083
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All DBs
Position
1:complement(4632264..4652841)
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AA seq
868 aa
AA seq
DB search
MESVMQPNWREIVNKKLKFPSELLDAIQEGDLLQVQQLLQGSDGILQQQADGEDRAWREA
LNLAIRTGSGEITGALLRYVKFDFRQIHEALLVAVDTNQPQVVKMLLDRLDQEKSIKMDI
KSFSLAFFDHSIDNARFAPGVTPLTLACEKDLYEIVDMLVQKGHSIPRPHKISCTCLECS
NGRTYDLLKFSLFRINTYKGIASRAYLSIASEDAMLTAFKLSRELQRLSCKEPEFKPEYL
SLELLSQEFAFELLGMCRNQSEVTAVLNDLGDSEEEEKLDSQAFEEGIPNLARLRLAVNY
NQKRFVAHPVCQQVLSSIWCGNLSGWRGSNTLWKFFVSCSIFLTVPLLCLLYWIAPKSRV
GKMLKIPVIKFLLHSASYFWFLIFLLAESIVLEQKHHIFLGRNQTLWENSLHMLWVAGFF
WYECKEVWIEGLRSYLLDLWNYLDIVILSLYLASFTLRVLVAVRGHLHCLDAPSSPGCYY
FTRAGRHEWQPEDPQFVAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMSRF
MFILMIILTAFLCGLNNTYVYYQESQRLGNFNETFQFLFWTMFGMEEYSVVDMPQYALAE
FVGRALYGIFTIIMVIVLLNMLIAMITNSFQKIENDADVEWKFARSKLYLSYFREGLTLP
VPFNIVPTPKSLFYAVRGIFQFICCSKPKRQLDYPPIPTIANTALENVGLGGESRRTYRL
QVIKALVQRYVDTARREFEESRRKDLGNRITELNKSVSRLHAEVKCLHHSPPAPASPLDG
ASPLHRYVLRVQDTFQNFSQASGSSGPGSPAQVVVHQDRAAGSDPQPYPEELSLGPQHKM
SPGEGDRAGEPEDPSSHPAEEADSGPSL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtcatgcaacccaactggagggagatagtcaacaagaagctgaagtttccc
agcgagctcctcgacgccatccaggagggggacctgttgcaggtgcagcagctgctgcag
gggagtgacgggatcctgcagcagcaggccgatggcgaggaccgtgcgtggcgggaagcc
ctcaacctggccatccgcacgggcagtggggagatcaccggggccctgctgcgctatgtt
aagttcgacttccgccagatccatgaggccctgctggtcgccgtggacaccaaccagccc
caggtggtgaagatgctgctggaccggttggaccaggagaagagcatcaagatggacatc
aagtccttctctctggccttcttcgaccactccatcgacaacgcccgcttcgcccccggc
gtgacgccgctcaccctggcctgcgagaaggacctctatgagatcgtggacatgctggtg
cagaaaggccactccatcccccgaccgcacaagatctcctgcacctgcctggagtgcagc
aacggccgcacatatgacttgctcaagttttccctcttccggatcaacacctacaagggc
atcgccagccgggcctacctctccattgccagcgaggatgccatgctgacggccttcaag
ctcagccgggaactgcagcgcctctcctgcaaggagccagagttcaagccagagtacctc
agcctggagctgctgagccaggagtttgccttcgagctgctggggatgtgccgtaaccag
agcgaggtgacagctgtgctgaatgacctgggggacagcgaggaggaggagaagctggac
agccaggccttcgaggagggcatccccaaccttgcccggctccggctggccgtcaactac
aaccagaagaggtttgttgcccatcccgtctgccaacaagtgctgtcgtccatctggtgc
gggaacctgtcaggctggcgtgggagtaacacgctctggaagttctttgtctcctgttcc
atcttcctgaccgtgccccttctgtgcttgttgtactggattgccccgaagtcgcgggtt
ggcaaaatgctaaagatcccagtgatcaagttcctcctccactcggcctcgtacttctgg
ttcctgatcttcctgctggcggagtccatagtcctggagcagaagcaccacatcttcttg
ggacgcaatcagaccctgtgggagaactccctgcacatgctctgggtggctggcttcttc
tggtacgagtgcaaggaggtgtggatcgaggggctgcgcagctacctcctggatttgtgg
aactacctggacatcgtcatcctcagcctgtacctggcctccttcacgctgcgggtgctg
gtcgccgtgaggggccacctgcactgcctggacgccccttcctcgccggggtgctactac
ttcaccagagccggacggcacgagtggcagcctgaagacccccagtttgtcgccgaggtg
ctgtttgcggtgaccagcatgctgagcttcacccgcctagcctacatcctgcctgcccat
gagtccctgggcaccctgcagatctccatcgggaagatgatcgacgacatgagccggttc
atgttcatcctcatgatcattcttaccgcgttcctgtgcggactcaacaacacctacgtt
tactaccaggagtcccagcggctggggaacttcaatgagacgttccagttcctgttctgg
accatgttcgggatggaggagtacagtgtggtggacatgccccagtatgccctggcggag
ttcgtggggcgggcgctctatgggatcttcaccatcatcatggttatcgtccttctcaac
atgctcatcgccatgatcaccaactccttccagaagatcgagaacgatgcggacgtggag
tggaagttcgcccgctccaagctctacctgtcctacttcagggagggccttacgcttcct
gtaccgtttaatatcgttcccacgccaaagtccctcttctacgcagtcaggggcatcttc
cagttcatttgctgctccaaacccaagagacaactggattaccccccgattcccaccatc
gctaacaccgccctggagaacgtcggcctgggcggggagagccgccgtacctatcggctg
caggtcatcaaggctctggtgcagcgctacgtcgacacggccaggcgggagtttgaggag
agcaggcggaaagacctggggaaccgtatcaccgagctgaacaagtcggtgtcacgcctg
catgcggaggtgaagtgcctgcatcacagcccgcctgcccccgccagccctctggacggg
gccagcccgctgcacagatacgtcctgcgggtccaggacaccttccagaacttcagccag
gcctcgggcagctccggcccgggctccccggcccaagtggtggtgcaccaggacagggct
gccgggagcgacccccagccctaccccgaggagctctcccttggcccccagcacaagatg
tctcctggggagggggaccgagctggagagccagaggacccgagttcccatccagcagag
gaagccgactctggccccagcctctag
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