Caretta caretta (Loggerhead turtle): 125631428
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Entry
125631428 CDS
T09292
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125631428 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125631428 (PEX1)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125631428 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_18
ABC_tran
RNA_helicase
DUF815
AAA_33
AAA_22
TIP49
AAA_5
AAA_28
Sigma54_activat
AAA_29
NACHT
AAA_24
AAA_2
AAA_7
AAA_19
Sigma54_activ_2
APS_kinase
Vps4_C
ATPase_2
Parvo_NS1
DUF87
Bac_DnaA
NTPase_1
KTI12
Viral_helicase1
AAA_23
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
125631428
NCBI-ProteinID:
XP_048694093
LinkDB
All DBs
Position
2:complement(46734264..46785201)
Genome browser
AA seq
1299 aa
AA seq
DB search
MWGSGYPGGGGAGGAAVTVAFSGTRDCFLHLPPVLASHLRLQQGQAVKVSWGHQPIFLSW
MEIRHCGHHGENIAEINRHLAEKLGITEGEQIFLEPCSQALSCQQVEVEPLSADDWEILE
LHASSLERHLLDQIRIVFPKAIFPVWVEQNTHIYIRIGTLKPPASYGRLEPRTQLFVCPK
TRQLEENTTNLPSSKSDSLHERFIKSNMDQGEIIKEPLAKEPHLNPGVLEQCKPDAKETF
GSNVLPNVWNFIGSIFSRSPEQKQISCGMSEMSAFKDELLHLIHMDSIFRVCQSQPPSVQ
STSATKAFQKNTVHVFPWNLEFVDLDPNIKVSYGKISKLRSPRQRHREAKQNLPFEKQKQ
MSSTEDRNQYGSNISQESSEMSVVRIVWNGFEDLESVIKYDSSVEAMHVGRVWIPDGLRK
RIHIEMHATVRIKSVDSVPKIPASLRLQPKRNLHKDISEDDIKSAFSLWLEDTTTVDLPW
IMTDTHHIQLVVKEVVQCVSTGMEEFVLSVVHPSHTEENKSENIFMLGPNLLQKTNIQVL
IHPMPTKADDDNTQSTIHDTDQILPFHKLNSLGGVGKLGTSSFEHITHSLLGRPLSQKLV
TIAVGLRSGAVLLTGAKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLENIRKKV
EEVFLEAAWRQPSILLMDDLDHIVGVPSTPEHENSPEAVQSYRLAYVLKDVIKEVISMGS
LIALIATSLSEHSLHPSLVSGQGTHVFQCFKHIQPPDQEQRCELLHSIIENKLNSDINRF
YDLDLQHIAKETEGFIARDFTMLVDRAIHSCVSNKGACNKEDLNLSTLDFQKALKHFTPS
SLRNVNLHKPKDLGWDRIGGLKDVQQILMDTIQLPTKYPGLFANLPIRQRTGILLYGAPG
TGKTLLAGVIARESGMNFISIKGPELLSKYIGASEQAIRDVFNRAQAAKPCIVFFDEFDS
IAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLY
CPPPDQTSRFEILKALSHSLPLANDVDFQHLAAKTEHFTGADLKALLYNAQLEAIHASLG
SSLPQDIGSSSDSDLSLSSMVFLNHSSGSDDSAGDVEGGLEQSLISLEMSELFPEDSRSN
IYRLYFGSSYESELGNGTPSELSSQCLSGPNSITHDLTGITLRDIVSSQPSVLRTASQEG
FQELNQEQREQLRAEINAIKANYRSKNGEDVAPSQSGLTKNTLIISQSHLMTALEDTRPS
VSQDDWKNFVELYENFQHPKKRKGQNGATFRPGQKVTLA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggctatcccggcggagggggcgcgggaggcgccgctgtgactgtcgcc
ttcagcggcacccgggactgcttcctgcacctgcctcctgtgctggcctcccaccttcgc
ctgcagcagggtcaggctgtgaaagtctcctggggtcaccagcctatattcttgagttgg
atggaaatcagacattgtggtcaccatggtgaaaatattgctgaaattaacagacaccta
gcagagaaacttggcattacagaaggagagcagatattccttgagccatgctcccaagcc
ttatcctgtcagcaagtagaagtggaacccctctctgcagatgattgggaaatactggag
ctgcatgcttcctctcttgaaagacatcttcttgaccagattcgaatagtatttccaaaa
gccatcttcccagtgtgggttgagcagaatactcatatttacattcgaattggtacacta
aagccacctgcttcttatggaagactagaacctcgcacacagctttttgtatgtccaaaa
acacgccagcttgaagaaaacaccaccaatctgccttcctcaaaaagtgactctttacat
gaaagatttattaaaagtaacatggatcaaggagaaataataaaggaacctttggccaaa
gaacctcatttaaatccaggtgtccttgaacagtgtaagccagatgcaaaagagacattt
ggctcaaatgtcctgccaaacgtatggaattttatcgggagcattttctctcgctctcct
gagcagaaacagatttcctgtggtatgagtgaaatgagtgcattcaaagatgagctatta
cacttgattcatatggactctattttcagagtatgtcagtcccagcctcctagtgtacag
agcacatcagccacaaaggcatttcagaaaaatactgttcatgtttttccatggaatctg
gagtttgttgatctagatcccaatattaaagtgtcttatgggaagatcagtaagcttcgc
tccccaagacagcgccatcgagaagcaaagcagaatctaccatttgagaagcaaaagcaa
atgtccagcacagaagacagaaaccagtatggctctaatatcagtcaagaatccagtgaa
atgtctgtcgtgcggatagtatggaatggatttgaagacctagagagtgtcataaaatat
gacagcagtgtggaagccatgcatgttggaagagtttggattccagatggcctgagaaag
agaatacatatagaaatgcatgcaacggtcagaattaagtcagtggattcagtccctaaa
attccagcatctcttagattgcaacccaaaaggaatttacataaagacataagtgaagat
gacataaaatctgcttttagtttatggttggaggataccactactgttgatcttccctgg
ataatgacagacacacatcatatacaactagttgttaaagaagttgttcagtgtgtttct
acaggaatggaagagtttgtccttagtgtggtacatccttctcacactgaagaaaataaa
tcggagaatatttttatgttgggtcccaatttgctgcagaagacaaatatacaagttctt
atacatcctatgcctacaaaggctgatgatgacaacacacagtctactatacatgatact
gaccagatccttcctttccacaaactgaacagtttaggaggagtgggtaaactaggaaca
tcctcctttgagcacataacccacagcctcttgggacgccctttatctcaaaagctagtt
accatagctgtgggactgcgcagtggagctgtcctgctcacaggagcaaagggaagtgga
aagtcaacattagcgaaggccatctgcaaagaagcctttgatagattggatgctcatgtg
gaagtaattgactgtaaggctttaagaggaaaaagattagaaaacatacgaaaaaaagtg
gaggaagtttttctagaggcagcatggagacagccatccattcttctgatggatgatctt
gatcacattgttggagttccttctacaccagagcatgagaacagccctgaagcagttcag
agctatagacttgcatatgttctgaaagatgtgataaaagaagttatttccatgggcagt
ttgattgcattaattgccacaagcctatctgaacattctctgcatccttcccttgtttct
ggtcaaggaactcatgtatttcagtgcttcaaacatatccagcctccagatcaggagcaa
agatgtgaattactgcattccataatagaaaataaattgaactccgatataaacagattc
tatgatcttgatctccagcatattgcaaaggaaacagaagggtttatagctagagacttt
acaatgctagtggatcgcgccatacactcctgtgtttctaataagggagcgtgcaacaag
gaagacttgaatctgtcaaccttagactttcaaaaagctttaaaacattttactccttca
tctctgagaaatgttaacctacacaaacctaaagacttgggctgggacaggattggtggc
ttaaaggatgtacagcaaatactcatggataccatccagttacccacaaagtatccagga
ttatttgcaaacctgccgatacgacagaggacaggaattttgttgtatggtgctcctgga
acaggaaaaactctattagcaggtgtaattgcccgagagagtggaatgaattttatcagc
atcaagggaccagagctcctcagtaaatatattggagcaagtgagcaagctattcgagat
gtctttaacagagcacaggcagccaagccttgtatagttttctttgatgagtttgattcc
attgcccctcgacgaggtcatgataatactggagtgacagaccgagtggttaaccaactg
ttgactcagctagatggagtagaaggcttacaaggggtttatgtgttggctgctactagt
cgtcctgatttgattgaccctgctctgttgaggccaggtcgactggataaatgcctgtac
tgtcctcctcctgatcagacttctcgttttgaaatcctaaaagccctcagtcattctctg
cctttggcaaatgatgtggactttcagcatttggcagcaaaaacagagcacttcacagga
gctgatctaaaagctttactgtacaatgcccagttagaagcaatacatgctagcttgggt
tcaagtttaccacaagatatcggttctagctcagacagtgacctcagtctctcttctatg
gttttcttaaaccatagcagtggttcagatgattcagcaggagatgtagaaggagggttg
gagcagtctcttatttccctagagatgtccgagttgtttcctgaagattcaaggtccaac
atttatcgtctttactttggaagctcctatgaatcagagctaggaaatggaactccttca
gaactgagctctcagtgtttgtctggaccaaactccataacccatgatttaactggcatt
actctgagagatatagtatcgtcacaaccctctgtgctcagaaccgcctcacaagaaggt
ttccaagaacttaatcaggaacaaagagagcaactcagggctgaaatcaatgcaatcaag
gccaactacaggagcaagaatggagaggatgttgcccctagccaatcaggattaaccaag
aacactttaattattagtcagtcccacctaatgactgcacttgaggacacaaggccatct
gtaagtcaagatgactggaagaattttgttgaactctatgagaattttcagcatcccaag
aagaggaaagggcagaatggagcaactttcagaccaggacaaaaagtgactttagcgtaa
DBGET
integrated database retrieval system
