Caretta caretta (Loggerhead turtle): 125631437
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Entry
125631437 CDS
T09292
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125631437 (VPS50)
Membrane trafficking [BR:
ccay04131
]
Protein recycling
Others
EARP complex
125631437 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
SAC9_GBDL_2nd
DcpS_C
Motif
Other DBs
NCBI-GeneID:
125631437
NCBI-ProteinID:
XP_048694109
LinkDB
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Position
2
Genome browser
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPAVLSLQEMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTASSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISATITLFEHYCNGGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDA
LLKEFEQFNRRMNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaagtcactgatgacccgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcccgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaagcttcctgcagtt
cttagtcttcaagaaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaaga
aggcacctgaatattgcaaaggaaggttttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgtcagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgttccaggtagttcttgggtacgtagagctgtgcgcaggaaactcg
gacaccaaatttcagaagctacagtacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgctcagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaactgcttcgtcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaacg
tatctgctggggacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatctattagaaaacaaagtgtgaactatttcaagaattatcacagaactcgtctt
gaagaattgcgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcgagc
tttagtattttacagcttcatgaatttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcagcaaccataactttgtttgagcactat
tgtaatggaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaaaagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacggga
gatgcccctgtaaaaagtgtttctagagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactcaatgtaataagactt
gttgggaaatacatgcagatgatgaacattttgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacagtgctagg
cagtttgaatcaacaggactgggtcttagtagtagcagactgcgcactacactaaacagg
atacaggagagcctgattgatctggaggtctctactgataccactggcaccctcacagct
gctgaagagagaaaggagaaagtgccaagcccacacctcagtcatctggtagttttaaca
tctggcaatactctgtatggtttggcagagagagtggtagccacggaatccttggtgttt
ttggctgagcagtttgagttccttcagtcgcatctggatgctgtgatgcctgcagccaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacggaaa
ccaatttattggattgtagctgctaaagctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaggagatcatgtcacaacacaacatatatgttgatgct
cttttaaaggaatttgaacagtttaacagaaggatgaatgaggtatctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatccgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccttgatgcaa
ttggacttccagcagtttttaatgaagctagaaaagctaacagacattaggcctattcca
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattccaccaagcagctgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgac
atagacagacctaaaagataa
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