Caretta caretta (Loggerhead turtle): 125631513
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Entry
125631513 CDS
T09292
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125631513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125631513
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125631513
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
RsgA_GTPase
AAA_16
AAA_28
AAA_30
AAA_29
Hamartin
SbcC_Walker_B
HXXEE
Motif
Other DBs
NCBI-GeneID:
125631513
NCBI-ProteinID:
XP_048694310
LinkDB
All DBs
Position
2:59303581..59358594
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AA seq
1349 aa
AA seq
DB search
MKDDFINHTEKEPPNPKSASNGYDNPAFQHDEKPEQNDELRNEKKKKNETSKEKMVGILK
LFGYADWLDIILMMIGLIAAVANGTGMPLLFVLFGGMTNRFVTIGQAVNMSSVNLSAVMN
SSSTCSAVPGLDIEAEMIRFAYYYVGIGFAVIILSTIQVWTFFTSAARQTARIRQKFFFA
ILHQEMAWFDASQMGMLNTRLTDDINTIHEGIGDKICIFVQLFATFLTGIIIGFIYGWKL
TLVILSVSPLLAASVAVGSIFLASFTTEELTAYARAGAVAEEILTAIRTVVAFNGQMKAL
AKYDVNLENARRVGVKKSITTNTTLGFAEFVLFGAYALSLWYGTKLTVEEKENYDIGRVL
IIYFSVLLGAFSLGQASPHLESVANARVAAYEVYKVISKHHLVDSSAKEGYRPDKLKGEI
EFKNIHFSYPSRPDVKILNGLNLKVQSGKTIALVGSSGCGKSTAIQLLQRFYDPVQGEIT
LDGRDIRTLNVKWLREHIGLVSQEPILFATTIAENIRYGREGITDSEIEKAAKEANAFDF
ISRLPDKFNTMVGERGAQLSGGQKQRIAIARALARNPRILLLDEATSALDTQSESVVQAA
LDKARAGRTTIVIAHRLSTIQTADIIAGFHNGVVVEQGTHNELMTLKGDYYSLVMRQGHS
GNTQNEISECDEETQNLDDLRMENVTDLGGFEEPGILEMESIPGRFRKCKSRKTSSKKKS
SEKKETENNKESGGTKEKEEENLPAVPYSRILALNKPEWLHIFFGMIAAAFSGGIYTVFS
VIFGKIIGAFQETDPEKRSKTTTWLSLMFLVLSVISLVTHIIQGFMFGKSGEVLTKRLRF
LSFKALIQQEIGWYDDHKNAIGVLLTRLATDASQIKGATGSQLGLFTKAACTLLTAIIIA
FVYEWRLTLLILVCIPFIIASNAIRLSSVAGHVLKDRKALEEAGRISIEAVENIRTVASL
TSEDAFCERYSASLNGPYRDSLTKAPIYGFTYGIAQCTLYFLDAAVFRFAAWLIANCYTN
FENVFIAFFSILYAALNVGQSISLAPDFGKAKVSAQQIFQLLDQKPLIDSYSEEGTKLSQ
FDGNIEFRDIHFVYPTRPEAQVLQGFSLKVNKGQTLALVGSSGCGKSTSIQLLERFYDPM
AGQVFADGFDIKSLHLHWLRSKLGIVSQQPILFDCSIAENIQYGDNSRVVSQEEIEEAAK
AANIHTFIENLPEKYNTQVGDKGAQLSGGQKQRIAIARALVRNPAVLLLDEATSALDTES
EKIVQKALDNARKGRTCIIIAHRLTTVQNADVIAVIHNGKVVEQGTHSQLLAKEGHYYAL
SWAKHLRRHAQLDIKGLEKGSTSVNRQYI
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgatttcataaatcacacagaaaaggaaccacctaatcctaaatctgcaagt
aatggctatgacaatcctgctttccaacatgatgaaaaacctgagcaaaatgacgagtta
aggaacgagaaaaaaaagaaaaatgagacgtcaaaggaaaagatggttggcattttgaaa
ttgtttgggtatgccgattggctggatatcattttgatgatgataggcttaattgcagct
gttgcaaatggaacagggatgccacttctattcgttctctttggaggtatgacaaaccgc
tttgtgacgattggccaagcagtaaatatgtcttcagttaatctttcagctgtgatgaat
agtagctctacttgttcagcagttccaggtttagatatagaagctgaaatgataaggttt
gcctactactatgtgggtattggcttcgctgtaataatactgagcaccatccaagtctgg
acattttttacctcagctgcaagacagacagcaagaatccgacaaaagttttttttcgca
atacttcaccaggagatggcttggtttgatgccagccagatgggaatgttgaacacacga
ctgacagatgacattaacaccatccatgaaggcatcggagacaagatctgtatatttgta
caattatttgccacgtttctgacagggattattataggattcatctacgggtggaaactg
actttggtgattttgtcagttagccctctccttgctgcatcagtagcagttggatcaatc
ttcctggcatcattcactacagaagagctgactgcttatgctagagcaggagccgtggca
gaagaaattttgactgctatcagaacagttgttgctttcaatggacagatgaaggcatta
gcaaaatatgatgttaacctagagaatgctaggagagtcggagtcaaaaaatccattact
accaacacaactttgggtttcgcagagtttgttttatttggagcctatgcgctttcattg
tggtatggaaccaaactcacagtggaggagaaagagaattatgacattggacgtgtgtta
attatatacttctctgtgctccttggtgcattctctctcgggcaggcctcccctcacttg
gagagtgttgccaatgctcgagttgctgcctatgaagtgtacaaagttatcagtaagcac
catcttgtagatagcagtgccaaggaaggatacagaccagacaagctcaaaggagagatt
gaattcaaaaacatccatttcagttacccatctagacctgatgttaaaattctcaacggc
ctgaacctgaaagttcaatcggggaagaccatagctctggttggctccagtggctgtggc
aaaagtactgctattcagctgctacagagattctatgatccagtccaaggagagattacc
ttagatggacgagatattcggacacttaatgtaaagtggctaagagaacatattggcctt
gtaagccaggagcctattttgtttgctacaacaatagctgagaacattcgctatggcaga
gagggtattactgattctgaaattgagaaagcagctaaagaagccaatgcttttgatttt
atatccagactgcctgataaatttaacactatggtgggggaaaggggagctcagctgagc
ggagggcagaaacaacgaattgctattgctcgtgccctggcaaggaatcccaggattctg
ctgctggatgaagccacgtctgctctggacactcagagtgaatctgtagtgcaagcagct
cttgataaggctagggctggacgtaccaccattgtgatagctcaccggctctccacaatc
cagacggctgacattattgctggatttcacaatggtgttgttgttgaacagggaacacac
aatgaactcatgacattgaagggtgactactattctcttgtgatgcggcagggtcatagt
ggaaacactcaaaatgagatatcggaatgtgatgaagagacacaaaatctagatgatctc
aggatggagaacgtgactgatcttggcggttttgaagaaccaggaatccttgaaatggaa
agcattcctggtagattcagaaagtgtaaaagcagaaagacctcttctaaaaaaaagtca
tctgaaaagaaggagacagagaacaacaaggaatccggtggcaccaaggagaaagaggag
gaaaatcttcctgctgtgccttattccagaattctggctctgaacaaaccggagtggctg
catatattctttggcatgattgctgctgccttctctggtggtatctacactgtattttct
gttatatttggaaaaatcattggggcttttcaagaaacagatcctgaaaaaaggagcaaa
accaccacatggctttctctaatgtttcttgtactgtcagtgatcagtttagtaacccac
ataatccagggattcatgtttggaaagtctggggaagttctgaccaagagattgcgattt
ttatcattcaaagcattgattcagcaggagattgggtggtatgacgatcataaaaatgcc
ataggggttttgttaaccagactagctacagatgcttcacaaatcaaaggggctactgga
agccaacttggcctgttcactaaggctgcctgtacccttctgaccgccatcattattgct
tttgtatatgaatggcgattaactttgcttatcctggtctgcattcctttcattattgct
tcaaatgctattagactgagctctgtggctggtcacgtattaaaagatcgaaaagctttg
gaagaggccggaagaatttcaatagaagcagttgaaaatataagaactgtggcttcatta
actagtgaagatgcattctgtgagagatatagtgcaagtttgaatggtccatacagggac
tctctaacaaaagcccccatatatggatttacctatggaatagcccagtgtacactctac
tttcttgatgcagcagtcttcaggttcgccgcctggctcattgctaattgttatacaaac
tttgaaaatgtatttatagcctttttttcaattctatatgctgctttgaatgttgggcag
tccatttctttggcaccagattttggcaaagctaaagtttctgcccaacaaatctttcag
cttttggatcagaaacccttaattgacagctatagtgaagaggggacaaaactgagtcag
tttgatggcaacattgaattcagggatatccattttgtataccctacaagaccagaagct
caagttttgcaaggattcagcctgaaggttaataaaggacagacgctagccttggtgggg
agcagtggttgtggcaaaagcacatccattcagctactggagagattttatgaccctatg
gcaggacaagtgtttgcagatggattcgatatcaagtctttgcatttgcattggttaagg
tccaaattgggtattgtgtcacagcagcctattttgtttgactgcagcattgctgaaaat
atccagtacggagacaacagtagggttgttagtcaggaggagattgaagaggcagctaaa
gcagcaaatattcacaccttcatagaaaatcttccagagaagtataatacccaagtgggt
gacaaaggagcacaactttctggaggtcagaaacaaagaatagcaattgctcgtgctcta
gttcgtaacccagcagttctgcttctagatgaagccacatctgctcttgacacggaaagt
gaaaagattgtccagaaagccttggacaatgccaggaagggtcgaacctgcattattatt
gctcaccgcttgacgactgtccagaacgctgatgtcatagcagtgattcataatggaaaa
gtagtggaacaagggactcacagccagttgctggcaaaggaaggacattactatgcactt
agctgggcaaaacatttgaggagacatgcacaattggacattaaaggtttagaaaagggt
tctacttcggtcaaccgacagtacatatga
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integrated database retrieval system
