Caretta caretta (Loggerhead turtle): 125631643
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Entry
125631643 CDS
T09292
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125631643 (TRIM71)
04121 Ubiquitin system [BR:
ccay04121
]
125631643 (TRIM71)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125631643 (TRIM71)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125631643 (TRIM71)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125631643 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Vgb_lyase
zf-RING_2
DUF4094
Motif
Other DBs
NCBI-GeneID:
125631643
NCBI-ProteinID:
XP_048694620
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All DBs
Position
2:complement(76380784..76475515)
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AA seq
874 aa
AA seq
DB search
MASFPEADFQLCPLCKEMCGSPAPISSNSSTSSSSSQTSNSSSAGGSSCAPSRRLHVLPC
LHAFCRQCLEAQRQHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVVV
AAAAAEEQKNNGRGGGGGGGNNRHHHPRQQQQQHRPAGSGSAAAAAASAAAPSPSASGGG
GSSSLLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHFIER
FGGAPGAAAAAAPGPAAPLALGQPYPATPYSILASVFPDRASYCQHHDDEVLHFYCDTCS
VPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVE
MKAKVVQSEVKAMTSRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNT
ISAVQQVLEEGRSMDILLARDRMLAQVQELKNVRGLLQPQEDDRVMFTPPDQALYMAIKS
MGFVSSGAFAPLTKATGEGLKRALQGKAASFTVIGYDHDGEPRLSGGDMISAVVMGPDGN
LFGADVNDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIGLPGL
SFGSEGDNDGKLCRPWGVCVDKEGYIMVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFD
RPAGVACDSSRRIVVADKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNTEGKI
LVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVI
HPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQ
GSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgaggcggacttccagctatgcccgctgtgcaaggagatgtgcggc
tcgccggctcccatctcctccaactcctccacctcctcctcctcctcgcagacctccaac
tcctcctcggcgggcggctcgtcctgcgccccgtcccgccgcctgcacgtcctgccctgc
ctgcacgccttctgccgccagtgcctggaggcgcagcgccagcacccgggcgcgggggac
gcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtggtggtggtg
gcggccgccgccgccgaggagcagaagaacaacggccgcgggggaggcggcggcggcggc
aacaaccggcaccaccacccccggcagcagcagcagcagcaccgcccggccggcagcggc
tccgccgccgccgccgccgcctctgcggccgccccgtccccgtccgcctccggcgggggc
ggctcgtcctcgctgctgctccggcggccgcacagccggcagggcgagccccgctgcagc
tcctgcgacgagggcaacgcggccagctcccgctgcctggactgccaggagcacctgtgc
gacaactgcgtgcgggcgcaccagcgcgtccgcctcaccaaggaccacttcatcgagcgc
ttcggcggggcgcccggcgccgccgccgccgccgcccccgggccggccgccccgctcgcc
ctgggccagccgtaccccgccacgccctacagcatcctcgcctccgtcttcccggaccgg
gccagctactgccagcaccacgacgacgaggtactgcatttctactgtgacacttgttct
gtccctatctgccgggaatgcaccatgggacgacatgtgggtcatagctttatctacctc
caagatgccctccaggattccagaaccctcaccattcagctgctagcagatgctcaacaa
ggacgccaggctattcagctgagtattgaacaggcgcaagctgtggcggagcaggttgag
atgaaagcaaaggtggtgcagtctgaagtcaaagctatgacatctcgacataagaaggcc
ctggaagaacgggagtgtgagctgctgtggaaggtggaaaagattcgtcaagtcaaagcc
aagtccctttacctgcaagttgaaaagttgcgtcagaatctaaataaactggacaacact
attagtgcagttcagcaggtcctagaggagggtcgtagcatggatattctcctggctcgg
gatcgcatgttggctcaagtgcaggagctgaagaatgtgagaggccttctacagccacag
gaggatgacagagtcatgttcactcctcctgaccaggctctgtatatggccattaaatca
atggggtttgtcagcagtggggcttttgctcctctgaccaaagccactggggaaggtctc
aaacgtgcactacagggcaaagcggcctccttcacagtgataggctacgaccatgatggt
gaaccacgcctttcagggggcgatatgatctctgcagtggtgatgggccctgatggaaac
ttgttcggtgcagatgtcaatgatcagcagaatggaacctacctggtcagttacagacca
cagcttgagggagagcatctagtctctgtcatgatgtgcaaccagcacatagagaacagt
ccgttcaaagtcatggtaaaatctgggcgcagttacattggcattggactaccagggctt
tcatttggcagcgagggagacaacgatggcaagctgtgtcgcccctggggagtttgtgta
gacaaagaagggtacatcatggttgctgatcgcagtaataaccgcattcaggtgtttaag
ccctgtggcacgtttcaccacaaatttggcaccttgggttccaggcctggtcagttcgat
cgccctgctggtgttgcctgtgatagctcgcgtaggattgttgtggctgacaaggataat
catcgcatccagatctttacatttgatgggcagttcattctgaaattcggggaaaaggga
accaagaatgggcaattcaattacccgtgggacgtggcagtcaacaccgagggcaaaatc
ctggtctctgacacgaggaaccataggattcaactgtttggacctgatggtgtgtttctg
aataaatatggcttcgaaggggcactctggaagcactttgattctccaaggggtgtgact
ttcaatcatgaaggccatctggtagtgaccgatttcaacaaccatcgcctcctggtcatc
catccagattgccagtcggcacgcttccttgggtcagaaggcaccagcaacggccagttc
ctgcgcccacaaggcgtggctgtggatcaagaggggcgcatcattgtggctgattccagg
aaccaccgagtgcagatatttgagtcaaatggtagttttttatgcaaatttggcactcag
ggaagtggctttggtcagatggaccgaccttcaggtatagctgtcacccctgatggcatg
attgttgtggttgacttcggaaacaatcgaattcttatcttctaa
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