Caretta caretta (Loggerhead turtle): 125631674
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Entry
125631674 CDS
T09292
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04621
NOD-like receptor signaling pathway
ccay05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125631674 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125631674 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccay04054
]
125631674 (NOD1)
Pattern recognition receptors [BR:
ccay04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125631674 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
NOD2_WH
LRR_4
FumaraseC_C
AAA_22
AAA_16
Sigma54_CBD
ABC_tran
sCache_like
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
125631674
NCBI-ProteinID:
XP_048694672
LinkDB
All DBs
Position
2:77969351..78019632
Genome browser
AA seq
951 aa
AA seq
DB search
MEGQSCANTKIIQQVPSGSSPPPFLNLLKIHRELLVSKIRNTQCLIDNLIKNEYFSTEDA
EIAAQFPIQADKVRKILDLVQSKGEEVSEYFIYILQEVSDAYYELQPWLDEIDFHPSQNI
QNKPVVNTDPVSRYRQKLKYELARDTKFVMSYAQKEEMLLEETYAASLIELVSYTNESLG
KVSRLEDLFDDRIGLINEDGETIYIFGDAGIGKSILLQKMQNLWARGELDVGAKFFFRFR
CRMFSCFRENEAICLKDLLFKYNCYPDQDPEEVFNHILHFPHTALFTFDGFDEIHSDFDL
SSIPEICSPNEPTHPLALLVNLLSGKVLKGSRKVLTARTGTEIHQNIIRKKVLLRGFSSS
NLKEYTKNFFRDEECRVLMSNQLEANPSLCSLCSVPLFCWIIFKCFELLRSMFDSHELPN
YSVTLTDVFLLMTEVHLNRTLKTNLLKKNTRSQVETFRSKKETLFSLGTIAHMGMEKSLF
IFDQEEVTSLHVSEQDLHLGFLRTVHDCGGYGDQSSCEFLHLTLQSFFTALFLVTEEKLG
TKELLKFFSECSSTDTAHSTCLPISWLRKCPIGEDPFRNKEHFHFTNLFLCGLLSKDKEK
LIRHLVSPAAIKRKRNALITYLLESMKFQMQSLMRARLKGYKQIQVMPNFVWMLRCIYET
QSEKLAKLTVRGMRANYIKLTYCNAYSADCSAISFVMQHFQKHLGLDLDNNNINDYGVKQ
LQPCFNKLAVIRLSVNQITDHGVRVLYDELSKYKIVTFLGLYNNQITDVGARYVARLIEE
CSSLTYVKIGANKITTEGGKCLALAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPTL
TNVSLAFNGITTEGGKSIAEALQHNSTVKIFWLTKNSIDDEAAKSFAEMLRVNKKLAHLW
LIQNQITAKGAKYLSEALQENTTLKEICLNGNLINQEEAKAFADEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcagtcttgtgctaatacaaagattatccagcaagtaccctctggatcaagt
cctccacccttccttaacttgctgaaaatacatcgagaacttttagtcagcaaaatccga
aacacccagtgtttgattgacaacttgatcaagaatgaatacttctctactgaagatgca
gaaattgccgcacagtttcctattcaagccgacaaggttcgtaaaattctggatctggtt
caaagcaaaggagaagaagtttcagaatatttcatctacatcctgcaagaggtctctgat
gcgtattatgaactacagccttggttggatgaaatagatttccacccttcacagaatatt
caaaataaacctgttgtaaatacagatccagtcagcaggtaccgtcagaaactcaaatat
gaattggcacgagacacaaagtttgttatgtcgtatgctcagaaggaggaaatgcttctg
gaggaaacctatgctgctagtcttatcgagctggtcagttataccaatgagagcctaggc
aaggtgagccgcttagaagatctgtttgatgatagaattgggttaattaatgaagatgga
gagacgatctacatctttggtgatgcaggtattggaaaatccattttgctacaaaagatg
caaaatctttgggccagaggcgaattggatgtaggtgccaaatttttcttccggttcagg
tgcaggatgtttagctgttttagggagaatgaagccatctgtttgaaggatctcctgttc
aaatacaactgttacccagatcaggaccccgaggaggtattcaaccacatcctgcacttc
cctcatacagcccttttcacatttgatggttttgatgagatccattccgactttgacctg
agcagcatccccgagatctgctcacccaatgaacctacccaccctcttgccctgttggtg
aatcttctcagcggaaaggttcttaagggatccaggaaagttctgacagcaaggacagga
actgagatccatcaaaacatcattaggaagaaagtactgctccgagggttttccagcagt
aacctgaaggaatacactaagaatttcttcagagatgaggagtgtcgggtattgatgtcg
aaccagctggaagcaaaccccagtctctgcagtttgtgttcagtgcctttgttttgttgg
attatctttaaatgctttgaactcctccgttccatgttcgacagtcatgagcttccaaac
tactcagttacactcacagatgtttttttgctcatgactgaagttcacttgaaccgaact
ctgaaaacaaatttgctgaagaagaacaccaggagccaagtggagacattcaggtcgaaa
aaggaaactctgttctctttgggtacaatagcacacatggggatggagaagtctctcttt
atctttgaccaggaggaagtcacatccttgcatgtgtcagagcaggatttgcacctggga
ttcctcaggacggttcatgactgtggtggctatggagaccagtcctcctgtgagttcttg
cacttgaccctgcagtcttttttcacagctttgttcctagttactgaagagaaattgggt
acaaaggagttactgaagtttttctcagagtgctcttccactgacactgctcactctact
tgtctccctatttcctggttgcgcaaatgccctataggagaagatcctttccgaaataaa
gaacattttcacttcaccaatcttttcctctgtggtctgctttccaaagacaaggagaag
ctcatcagacatttagtttcacctgcagccattaaaaggaaaagaaatgcgctcattaca
tatctcttagaaagcatgaaatttcaaatgcagagcctgatgcgggcaagacttaagggt
tataaacagattcaggtcatgcccaattttgtttggatgctgaggtgcatttatgagact
caaagtgaaaaactagccaagctgactgtcaggggcatgagggccaactacatcaaactc
acctattgcaatgcgtattcggcagactgcagcgccatttcctttgtgatgcagcacttt
cagaagcatctgggtctggatctagacaacaataatatcaatgactatggagtaaaacaa
cttcaaccttgttttaacaagcttgcagtgatcaggctgagtgttaatcagatcacagat
catggagtaagagtactatatgatgagctctccaagtacaaaattgtgactttcctgggc
ttgtacaacaaccaaattactgatgttggagccagatacgttgcaagactcattgaagaa
tgttcaagcctcacatatgttaaaataggagcaaacaagataaccactgaaggagggaaa
tgtcttgcccttgctatccagaagagcaaaacaatgtttgaaattgggatgtggggtaac
caggttggagatgaaggagcgaaggcgtttgcagaggcactgaggaatcaccccacctta
acaaatgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagcattgccgaa
gctttgcagcacaacagcaccgtgaaaatattttggttgactaaaaattcgatagatgac
gaagctgcaaagagctttgcagagatgctgagagtcaacaagaagctagcacatttatgg
cttatccagaatcagattacagccaaaggggccaaatacctcagtgaagctctccaggag
aacacaaccctgaaagaaatctgcttaaatgggaacctgatcaaccaagaagaggccaaa
gcctttgcagatgaagaacggattatttgcttttga
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