Caretta caretta (Loggerhead turtle): 125632104
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Entry
125632104 CDS
T09292
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125632104 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125632104 (RPP40)
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125632104 (RPP40)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125632104 (RPP40)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125632104 (RPP40)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125632104 (RPP40)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125632104 (RPP40)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125632104 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
125632104
NCBI-ProteinID:
XP_048695725
LinkDB
All DBs
Position
2:complement(147012849..147071291)
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AA seq
484 aa
AA seq
DB search
MPSPVWVTAPCHGIQAPPTLLPLFCPFFIPFCTGGGLSQLRQLLLRMLTPSLSNYTGSQS
RGYTGNSCSEFGRAPEVTALPRPPFLRLPPSLLPPRTWGGARGSPRCFLVGGCCAARGLR
MSVALRRLRETPRHLLVCEKSHVRHERSRHAAHVRSHAYNCRVSFLIPECGILPEALKRV
ITDFGEYYLVKNLSLHELVTHEFINTFVKKGSCYALTYNTKIDQDNAAALLPTGKLIISV
DKDTYEELGLQGRPSQYSGRKVMRYIVTIDLTDSAFDPDSKKHKRVLWALKEKKPLEFDF
LLSWHNTGAEGSTLVSYFSKNQIQAHQPKTTFSTLRNLQCPVLHSNELQGKLEESCSAQE
LFEWLGAVCNKVGLDNKSFSFLSTYCCPQPSTVVEQAYLCTITGFILPEKIIQLLEQLCC
YFDEPKLAQWVTLTVHGFADSPVSWRESEHGFQKGGENLYNFVVFRSLDYWLQMAVGAND
DCPP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccctgtgtgggtgactgcaccctgccacggcatccaagcacccccaaccttg
ctccccctgttctgtcccttttttatcccgttttgcacagggggagggctgtcgcaactt
cgccagctgttactgcgcatgctcaccccctctctcagtaattacacgggtagccagagc
cgaggctacaccggaaacagctgttctgagtttggaagggcgccggaagtaaccgcactg
ccccgcccccccttcctccgcctgcctccctccctccttccgccgcggacgtggggcggg
gcgagggggagcccccgctgcttccttgttggcggctgctgcgcggcgcgcggactcagg
atgtcggttgcgctccggcggctccgcgagacgccgcggcacctgctggtgtgcgagaaa
agccacgtgcggcatgagcgctcccggcacgcggcgcacgtgcggagccacgcctacaac
tgccgcgtgtcatttttgatccctgaatgtggaattcttccagaagcactgaaaagagtt
atcacagactttggagagtattacttggtgaagaatttatcccttcatgaattggttaca
catgaatttatcaatacatttgtgaagaaaggttcatgctatgctcttacgtacaacaca
aaaattgatcaagataatgctgctgctctactaccaactggaaagctaattatatcagta
gacaaggatacatatgaggaacttggactacaaggtcgtccatctcagtattctggtaga
aaagtcatgagatatattgttaccattgacttgactgactcggcctttgatcctgatagt
aagaaacataaaagagtgctttgggccttgaaagagaagaaacctttagaatttgatttc
ctgctgtcctggcataacacaggtgcagaaggatcaacactggtgtcatacttttccaaa
aatcaaatacaagcccatcaaccaaaaacaacattcagcacattaagaaatttgcagtgt
ccagtgctccatagtaatgaactgcaaggaaagctggaagagtcatgcagtgcacaggaa
ctgtttgaatggctaggtgctgtttgcaacaaagttggtttagacaacaagtcatttagc
ttcttatcaacctattgctgtcctcagcccagcacagtagtggagcaagcctatttgtgc
acaatcactggctttatactcccagagaagataattcagttattggaacagctgtgttgc
tattttgatgaaccaaaattggctcagtgggtgaccttaaccgtgcatggctttgcagac
agccctgtttcttggagagaaagtgaacatggtttccaaaagggaggagagaacttgtac
aattttgttgtttttaggagcctggactattggcttcaaatggctgttggagcaaatgat
gattgcccaccttaa
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