Caretta caretta (Loggerhead turtle): 125632195
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Entry
125632195 CDS
T09292
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125632195 (SOX4)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125632195 (SOX4)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
KCT2
Motif
Other DBs
NCBI-GeneID:
125632195
NCBI-ProteinID:
XP_048695945
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All DBs
Position
2:157682416..157687070
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AA seq
437 aa
AA seq
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MVQQTNNAENTEALLAGETSDSGAGIELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNSSAKPGEKGDKSGGGSPGAGGGGTGSGGSTNSSKPALKKSGG
SKLSPGGGSGASKPHAKVILGSKAAPFPAEPPAQAALLPPDHHSLYKSRGGGAAASSCSA
AGKHPSEKKLKRVYVFGTGGGHGQSASSSPGGAVPASPTLSCSTEASDPLSLYEEGGAGG
CQQDGDCSSVSCPSPPGSSSPSDHRSYTSLRASSPAPSTSHSSSASSHSSSSSSSSGSSS
SDDEFEDDLLDLNPSPGFESMSLGSFGSSVLDRDLDFNFEPGSGSHFEFPDYCTPEVSEM
ISGDWLESSISNLVFTY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagactaacaacgcggagaacacggaagcgcttctggccggagagacctcg
gactccggggccggcatcgagctgggcatcgcctcctctcccacgccgggctccaccgct
tccaccgggggcaaggcggacgacccgagctggtgcaagacccccagcgggcacatcaag
cggcccatgaacgccttcatggtgtggtcccagatcgagaggaggaagatcatggagcag
tccccggacatgcacaacgccgaaatctccaagcgcctgggcaagcggtggaagctgctc
aaggacagcgacaagatccccttcatccgggaggcggagcggctgaggctcaagcacatg
gcggactatcccgactacaagtaccggcccaggaagaaggtgaaatcggggaacagctcc
gccaagcccggcgagaaaggagacaagagtggcgggggcagccctggcgccggcgggggc
ggcaccggcagcgggggcagcacgaactcctccaagcccgccctgaagaagagcggcggc
tccaagctctcccccggcggcggctccggggccagcaagccgcacgccaaggtgatcctg
ggcagcaaagccgcccccttccccgccgagccgccggcgcaggccgccctgctgcccccg
gaccaccactcgctgtacaaatcccgcggcggcggcgccgccgccagctcctgctcggcc
gccggcaaacacccctcggagaagaagctcaagcgggtctatgtgttcggcacgggcggg
ggccacgggcagagcgcgtcctcctcccccgggggcgccgtgccggccagcccgaccctg
agctgctccacggaagccagcgaccccctgagcctgtacgaggaggggggcgccggaggg
tgccagcaggacggagactgcagcagcgtctcctgcccttccccgccgggcagcagctcc
ccttcggatcaccgcagctacaccagcctgagggcctcttccccggccccctccacctcc
cattcctcctcggcttcctcccattcctcctcgtcctcctcctcctccggctcctcttcc
tcggacgacgagtttgaagacgacctgttggacctgaaccccagccccggttttgagagc
atgtccctgggcagcttcggctcgtcagtgctggaccgggacctagattttaacttcgag
cctggctcgggctcgcactttgagttcccggactactgcaccccggaggtaagtgagatg
atctcaggggactggctggagtccagcatttcaaacctggtcttcacttactga
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