Caretta caretta (Loggerhead turtle): 125632329
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Entry
125632329 CDS
T09292
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04510
Focal adhesion
ccay04512
ECM-receptor interaction
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125632329 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125632329 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125632329 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF713
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
125632329
NCBI-ProteinID:
XP_048696265
EnsemblRapid:
ENSCECG00000016608
LinkDB
All DBs
Position
2:177923816..178081255
Genome browser
AA seq
3195 aa
AA seq
DB search
MELTPRPPTQRLLLPQLLVEQTKERGVPDAVLARRINSEATLDRSFTPGRLWSLGARNVP
LLPPPALARSLPWSPGLCSSLPSRRGSCHALSPRLAMEGSLAVQRGGEIRKGLFPAILNL
ASHAHINTNATCGEKGPEMFCKLVEHVPGRPLRNAQCRVCDHNSANPKEQHPISNAIDGT
NNWWQSPSIQNGREYHWVTITLDLRQIFQVAYVIIKAANAPRPGNWILERSVDGTEFKPW
QYYAISDTECLTRYNVTPRLGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSAD
DPSQTLLEFTSARYIRLRLQRIRTLNADLMTLSHHDPKDLDPIVTRRYYYSIKDISVGGM
CICYGHARSCPLDETTKKLQCQCEHNTCGESCNECCPGYHQNQWRPGTISAGNKCEKCNC
HNKAEDCYYNQGVADQNRSINIHGQFIGGGVCINCTQHTTGINCEICADGYYRPYKISPY
EDNPCHPCDCDPFGSLSSDCIKDDDHSDLQHGTQPGQCQCKEGYTGEKCDRCAFGYKGYP
SCVHCNCSLVGSISDDPCTEPCLCKENVDGENCDRCKPGFYNLQERNPQGCTECFCFGVS
DVCDSLAWPISQVSDMAGWLVTDLYTEKRLEPQQGQFAGPHQISVNNTAAVKILKSTYYW
SAPEPYLGNKLTAFGGYLKYTVSYDIPMESVDSDMVSNVDVIIAGNGQILSTRSEGLSLQ
PYEEYSNTVKLVSENLIDFNTKKAIDRDRLMTVLANVTHLLIRANYNVAKRAIYRLDSVT
LDTANANAIDLSSAAEVEQCECPQGYTGISCESCLSGYYRVGGILFGGICQPCECNGHAS
ECDIHGVCFACQHNTTGLSCNQCLPGFYGTPSRGMPEDCQPCACPLRTDTNNFSPTCHMD
NRGEVICDKCLPGYAGSRCERCANGYYGNPLVPGESCVPCDCNGNIDPTEDGHCDALTGE
CLKCVRNTQGHHCEKCADGYYGDAVIAKSCHVCECHVNSSLSNICHRETGRCHCKPNVIG
PRCDTCVNGYYGLNTGLGCLPCNCSQYGSVSEDCNDEGQCHCVPGVAGEKCDHCAHGFYA
FQDGGCTPCDCAHTQNNCNEDSGQCICPPHTQGPKCELCEDNYWGLDPKHGCMACDCSDV
GSTSLQCDLQTGQCQCKDEFGGEDCSKCALGYRDYPDCVSCDCDLSGTKADKCDESQGVC
SCEEETGICACKENVFGFHCSECKTGTFALRASNPLGCTPCFCFGLSEFCSELEDHVRIP
VTLTPDQSILHVVSQSNLTGTVEGVFSQFSDVLLDATTVREHLKTEPFYWRLPDQFQGDQ
LMAYGGKLKYIVAFYALDGFGTSNFEPQILIKGGRTSKLVIYVDISAPQNGVRSEEEVEM
KEHVWKYFNSVSDQSVTRSDFMSVLSNVEYILIKASYGQGLQQSRIANISMEIAVKAEEM
HLGRETAHLIEQCECPTGYAGLSCQSCASGYYRAKHVDLNVKEPRQMIAPCVPCQCNNHS
ETCNLETGKCLNCRDNTAGEHCSVCAPGYYGKVIGSVNDCSLCACPRTNLTSFSPTCVLK
DGHDFHCDACLTGYEGQYCERCSLGYYGNPEMPGGSCQQCQCNPSGSSHNNCDHISGQCL
CKQGVTGQLCDACEPRHILVENECVSCNDDCTGVLLNDLDHLDKAIFSVNFTGVTFAPYG
ILADVENVTKYLKESLLSREDPIYSLEMAKEGLVNISGGTDRLHKELTRILERGWQLNNA
TQRTMNESRHLTVFIDTMYTTIKVLAEVATSLNETLALNFQLSNSTSQSLQEDISTMLEA
MRRRHFMQQDQNVTTVLNTAERLLLRVQKEYLKPQQELAELKKAASHLLTNHNIRLQEAQ
DLVNEACTNTNETNRLLFLIYSNLAELNDKKLNIQENKDLSIMLIKEGKVLMDVAAALAT
DVKNSTSNLEIHRDGLDLWNAKLRHHVDDLVMQMSTRGALDLVYRAEDHAAECQKLAEAL
DSGLSNVRNVSLNATNAVHAHSSITNLIERTENLADDASRVITNPLDSPEESLDSLGKEA
LQLSSKFLNETKNLKRKNEGLVSRLNGLKKKVEKIQESAHKITNQLNDSWLALRALPNDT
NDTFFEAKELAVSANTSAVAGLNHIVDFNQKLLNTSSELSRVNDTLRKTNELIMDSSKAA
ASAERQVKEVEAQANLLFDRLKPLKMLEENLSRNLSEIKELISQARKQAASIKVAISADR
DCIRAYSPQISSANYNILTLNVKTTEPDNLLFYLGSSGNSDFMAVEMRRGKVAFLWDVGS
GATRLEYPNFQIDNNKWHRIHITRFGKTGTLSIEDTSSNQKSLSKTATAPGTATVLDVNK
STLIFVGGLGGQIKKSPAVKVTHFKGCMGEASLNGKSIGLWNYIKREGACNGCFGSPQDE
DTSFHFDGSGYSVVERALRSTVTQIIMFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVR
LTVDLGSGPLTLKTENRYNNGTWYKISFSRNKKQGVLAVMDAYNLNYKETKQGESPGVAS
DLNRSDKDPIYIGGLPRSRAVRKGLNSRTYVGCIKNLEISRSTFDLLKNSYGVRKGCILE
PIRSVSILNDGYIELLPKSLSPESELMVTFATKNSSGIILAGLSKGMEKRRRRQAHLPFF
SIMLIDGHLAVYINAGDRASTRKIILQPANGTYSDGQEHSVILIRNKRMITVQVDESNPA
ELRLGLSAEMSPMNISNFYAGGVPAGEGISGFKMTESFYGCIRNLIFNMQLLDFTTAVRY
EHVDMDSCLLSEKPKSAIQAEDIEIQPELQPLPIPLRPLTEIKRVNTTNLVHAAPVSKGQ
CAQDSIPDHVPSAHQFGLAKGSHIVLPFNQSTVRRKLSVQLNLRTYASSGLIYYLAHQNQ
IDYAALQLHGGQLYFLFDLGKGKAVAFHPAAISDGKWHTVKTEYVKRKGIITVDGQESAA
VNALGDGNTLDVEGKLYLGGLPLDYTARNTGNVTHSIPACIGSVMINNKQLDKESPVSIL
AVNKCYATAQEGTFFDGSGFAALVKEGYKVRSDVNVTFEFRTMAMNGVLLGISSAKVDAI
GLEIVNGKVLFHVNNGAGRITATYEPQGANSLCDGKWHKLQANKSKHRIALMIDGNLVQA
DNPHIQSTSADTNNPIYVGGFPADMKQNCLTSKNSFHGCLRNLKLIKGQLVESYDFSKAF
DLHGVFPHSCPGSEH
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggaacttacaccccgccccccaactcagcgtctcttgctaccacagctactggtggag
caaaccaaagagaggggggttccagacgcagtattagctcggagaatcaattccgaagca
acgctggatcggagcttcacgccggggaggctttggagtttgggtgcaaggaacgtgccc
cttttaccgccaccagcactggcccgctccctcccttggagcccagggctctgcagtagc
ctcccctctcggagaggttcgtgccacgccctctctccgcgcctggctatggaaggctca
ctcgctgtgcagcgtgggggggagataagaaagggtttgtttcctgctattttaaatctg
gctagccatgctcatatcaacaccaatgccacctgtggtgagaagggaccagagatgttc
tgcaaacttgtggaacatgtgccgggccgacctctacgcaatgcacagtgcagggtgtgc
gaccacaacagtgctaaccccaaagaacagcaccctatctccaatgctatagatggtacg
aataactggtggcaaagtcccagcattcagaatgggagggaataccactgggtcaccatc
accctggatctaagacagatctttcaagttgcatatgtcataatcaaagctgctaatgct
ccccgacctggaaactggattttggaacgttcagtggatggcacggagttcaaaccatgg
cagtattatgcaattagtgacacagagtgcttaactcgttataatgtaacaccaagactt
gggcctcctacttacaagagagatgacgaagtgatctgcacctcttattattccaggcta
gttccattagaacatggagagattcacacttcattgatcaatggtagacctagtgctgat
gatccttcgcaaacgctattggaatttacctctgcacgatacatccgtcttcgcctgcaa
cgtattagaacccttaatgctgacctcatgactcttagccaccatgatcctaaagacctt
gatcccattgttaccagaaggtattactattcaataaaggatatctctgttggtggcatg
tgtatttgctatggccatgctcgaagctgcccactggatgaaaccacaaagaaactgcaa
tgccagtgtgaacataatacatgcggagagagctgtaatgagtgttgccctggttaccat
caaaatcaatggagaccaggaactatttctgctggcaacaaatgtgagaagtgcaactgt
cataacaaggcagaagattgttattataaccagggtgtggcagatcagaataggagcata
aatattcatggacagttcataggaggtggagtctgtataaactgtactcaacacactact
ggaatcaactgtgaaatctgtgctgatggatactatcggccatataaaatttctccctat
gaagataacccttgccatccttgtgactgtgacccatttgggtctctgagttctgactgc
attaaggatgatgatcattctgatcttcagcatgggactcagccaggtcagtgtcaatgc
aaagaaggttacacaggagaaaaatgtgatcgctgtgcatttggctacaagggctaccca
agctgtgtgcactgtaactgcagcctggttggaagcattagcgatgacccttgcacagaa
ccttgtctttgcaaggaaaatgtagacggcgaaaactgtgaccgctgcaaaccaggattc
tacaatttgcaagaaaggaatcctcagggctgtacggagtgcttctgctttggggtttct
gatgtctgtgacagccttgcatggcccatcagtcaggtgtcagatatggctgggtggctg
gtgactgatctgtacactgaaaagaggttggagccccaacaaggccagtttgctggaccc
catcaaataagtgtcaacaacacggcagctgtgaaaatactgaaatccacttattactgg
tcagcacctgagccatacttaggaaataaactcactgcctttggtgggtacttgaagtac
actgtgtcttatgatattccaatggaaagtgtggacagtgatatggtatctaatgtggat
gttatcattgcgggcaatggacagattttgagcaccagatctgaggggctgtcattgcaa
ccctatgaggagtactctaatacagtgaagcttgtgtctgagaacttaatagactttaat
acaaaaaaggctatagatcgggacaggctgatgactgttttagcaaatgtgactcatctt
ctgatcagggccaattacaacgttgcaaaaagagccatatacaggctggactctgtcact
ctggatacagcaaacgctaatgctatcgatctgtcatcagcagcagaggtggaacagtgt
gaatgtcctcaaggttacacagggatttcctgcgagtcctgtctctctgggtactaccgt
gtgggtggaatactctttggaggtatttgtcaaccctgtgaatgcaatggccatgcatct
gaatgtgatattcatggtgtttgctttgcttgtcaacacaacactacaggactttcctgt
aatcagtgcttgccagggttctatggaactccatcccgaggaatgccagaggactgccag
ccatgtgcctgcccactaagaactgatacaaacaatttcagtcccacctgccacatggac
aatagaggtgaagttatctgtgacaagtgtctaccaggctatgcaggatcacggtgtgaa
agatgtgctaatggttactacggaaatccactggtgcctggagagtcatgtgttccttgt
gactgcaatggcaatatagatccaacagaagatggccactgtgatgcactcacaggagag
tgtctgaaatgcgtgagaaacactcagggccatcactgtgaaaagtgtgctgatgggtac
tatggggatgccgtgattgctaaaagctgtcatgtctgtgagtgccatgtgaatagctcc
ctttcaaacatttgccatcgtgagactggccgatgtcactgcaaaccaaatgtgattgga
ccaagatgtgatacatgcgtgaatggttattatggcttgaatactggacttggctgcctt
ccctgcaattgcagtcaatatggctcagtctccgaggattgtaatgatgaaggacagtgt
cactgtgtaccaggagtggctggggagaagtgtgatcactgtgctcatggcttttatgca
ttccaggatggtggctgtacaccttgtgattgtgctcatactcagaacaactgtaatgag
gattctggtcagtgcatctgtccccctcacacgcaaggaccaaaatgtgaactctgcgag
gacaattactggggtcttgatcctaaacatggctgtatggcctgtgactgcagtgatgtc
ggttcaaccagtctccagtgtgacttacagacaggtcaatgccaatgtaaagatgaattt
ggaggagaagattgttctaagtgtgccttaggctatagggactatccagattgtgtttcc
tgtgactgtgacttgagtggcaccaaagcagacaaatgtgatgagagtcaaggagtctgt
agttgtgaagaagaaactggcatttgtgcctgcaaggaaaatgtatttgggtttcactgc
agtgaatgcaagactggaacctttgctctccgtgctagcaatcctttaggatgcactcca
tgtttctgttttgggctgtcagagttttgctcagaattagaagaccatgtgagaattccg
gtaaccttaactccagatcagtccattctgcatgtggtttctcaaagtaacctcactgga
acagttgagggtgtgttttctcagttttctgatgttttactggatgccacaactgtcaga
gaacacttgaaaactgagccattttattggaggttaccagaccagttccagggagaccag
ctcatggcctatggaggaaaactgaagtatattgttgccttttatgctttggatggcttt
ggcacgtcaaactttgaaccacagattctgataaaggggggtcgcaccagtaaattggtc
atctatgtggatatctctgccccacaaaatggagtaagaagtgaggaggaagtagaaatg
aaggagcatgtgtggaaatactttaactctgtgtctgaccaatctgtcacacgttctgac
ttcatgtcagtgcttagcaacgttgagtatatccttatcaaggcatcatatggccaagga
ttacagcaaagcagaattgcaaatatctcaatggaaattgcagtgaaggctgaggagatg
catttgggcagagaaacagcacatctcatagagcaatgtgagtgtcctactggctacgct
ggactctcatgtcagagctgtgcgtcggggtactacagggcgaaacatgtagatctgaat
gtaaaagagcctcgccaaatgattgcaccttgtgtgccatgtcagtgcaacaaccacagt
gagacctgtaatctggaaacaggaaagtgcctgaactgcagagataacacagctggtgag
cactgtagtgtttgtgccccaggctactatgggaaagtaattggatctgtcaatgactgc
tctctttgtgcctgtcccagaaccaacctgacgagctttagtcccacttgtgttctgaaa
gatggtcatgatttccactgcgatgcttgtctcactggatatgaagggcaatactgtgaa
aggtgttctctaggttattatggtaatcctgaaatgcctggtggcagctgtcaacaatgt
caatgcaatccaagtggctcgagtcacaataattgtgatcacatatctggacaatgcctt
tgtaagcagggtgtgacaggacaactgtgcgatgcatgtgaacccagacacatccttgtg
gaaaacgaatgtgtttcttgcaatgatgactgcacaggtgttttattaaatgacttggat
caccttgacaaagccatattttcggtaaacttcactggtgttacctttgcaccatatggg
atattggcagatgtggagaatgtaacaaaatacctgaaggagtctttattgtctagagag
gatccaatctattcactggagatggcaaaagaaggtcttgtgaatatatcaggaggcaca
gatcgactgcacaaagagttaactagaatattggagagaggatggcagctcaacaatgca
actcaaagaaccatgaatgagagtcgacatttgactgtatttattgacaccatgtataca
accatcaaagtacttgctgaagtggccacatctttaaatgagactctggctctgaatttc
cagttgtcaaacagtacatctcagagtctgcaggaagatatctccaccatgctggaagca
atgcgcagaagacatttcatgcagcaggatcaaaatgtcaccactgtactaaacactgca
gagaggttgctgttacgggttcagaaagagtatctcaaaccccagcaggaacttgcagaa
ctaaaaaaagctgcaagccatctcttaacaaaccacaacatcagactacaagaagcccag
gacctggtgaatgaggcttgtactaacaccaatgaaaccaaccgtctgctttttcttatc
tacagcaacctggcagagttaaatgataaaaagctaaacatacaagaaaacaaggacctt
tccatcatgctaattaaagaggggaaagtgttgatggatgttgctgctgcccttgccaca
gatgtaaagaactctacgtcaaatctagagatccatcgagatggactggacctctggaat
gccaaactaaggcatcatgtagatgacctggtcatgcagatgtccacgaggggagcactt
gatctagtctacagagcagaggatcatgcagctgaatgtcaaaaacttgcagaagcgcta
gacagtggtctctcaaatgtaagaaatgtatctctgaatgcaacaaatgctgtccatgcc
cactccagtattacaaatctgattgaaagaacagaaaatctggcagatgatgcttctaga
gttataactaaccccttggactcaccagaggaatctcttgattctcttgggaaagaagct
ttacagcttagttctaaatttctaaatgaaacaaaaaatctgaagaggaaaaatgaaggc
cttgtgtctagattgaatggattgaaaaaaaaagtggaaaagattcaggagagtgctcat
aaaattactaaccagcttaatgattcatggctggcactgcgagcattgcctaatgatacc
aatgacacattttttgaagcaaaagagctggctgtgtctgctaacacaagtgctgttgct
ggtttaaaccacattgtggatttcaatcaaaagctgctaaacacttcttctgaattgtcc
agggttaatgacacgttgaggaaaaccaatgaacttataatggactcctcaaaagctgca
gcctcagctgaaagacaagttaaagaagtggaagcacaagccaatcttttatttgacagg
ctgaaacctctgaaaatgttggaagagaacctgagcagaaatctgtctgaaattaaagag
cttatcagtcaagcccgcaaacaggcagcatctattaaagttgcaatctcagcagataga
gactgtattcgtgcctactcaccgcaaatttcttctgctaactacaacatcttaacatta
aatgtgaaaacaactgaacctgacaacctcctcttctacctgggtagcagtggcaatagt
gacttcatggcagtagagatgcgacgtggtaaggtggccttcctttgggatgtgggctca
ggagcaacaagactggaatatccaaattttcaaattgacaacaacaaatggcacagaata
catataaccaggtttgggaaaactggtacattgagcatagaggacacgagctctaatcag
aagtccttaagtaaaactgcaactgctcctgggacagctactgtactggatgtaaacaaa
tcaacactaatatttgttggaggacttggagggcaaatcaagaaatctcctgctgttaag
gtgactcattttaaaggatgcatgggagaggcatccttgaacggaaaatctattggtctt
tggaactacattaaaagagagggcgcatgcaatggatgctttggaagcccacaggatgaa
gatacttcttttcattttgacggcagtggatattcagttgtggagagggccctccgctcc
actgtgactcagataatcatgtttttcagcaccttctcacctaatgggctcctgctgtat
cttgcttctaatggcaccagagatttcctgtccctagagctcgtggatggcaaagttaga
ttaactgttgatcttggttcaggacctcttacgcttaaaactgaaaatcgttacaataat
ggaacatggtacaaaatctcattcagtcgtaacaagaagcaaggagttttggctgtcatg
gatgcatataatcttaattataaagaaaccaagcaaggagaatcccctggcgtagcctca
gacctcaatcgctcagataaggacccaatttacattggtggactgccaagatctagggct
gtgaggaaagggcttaacagcagaacatatgtgggatgcattaagaacctagaaatatcc
cgctctacctttgacttgctaaaaaactcatatggtgtgagaaaagggtgcatactggag
cctatccgtagtgttagcatcttgaatgatggctacattgagttgctacctaagtccctg
tctccagaatcagaactgatggtaacttttgctactaagaacagtagtggcatcatcttg
gctggtctcagcaaaggaatggagaagcgacgacgaagacaagcacatttgcccttcttt
tccatcatgctgattgatggtcatcttgcagtgtatattaatgcaggagacagagcaagt
actagaaaaatcatcctccagcctgcaaatggaacatacagtgatgggcaagaacattct
gttatcctgatccggaataagaggatgataacagtacaagtggatgaaagtaatcctgca
gaactgagacttggcttgtcggcagaaatgagccccatgaatatttccaacttctacgct
ggtggggttccagcaggagagggcatttctgggttcaagatgacagaatctttttacggc
tgtattagaaatctgatctttaacatgcagcttctggatttcaccactgcggtgaggtac
gagcatgtggatatggacagctgcttgctttcagagaagcctaaatctgccatacaagca
gaggatattgagattcaaccagaactgcagccattgccaattcctctgcggcctcttacc
gaaattaagagagtaaatactacaaacttagtgcatgctgcccctgtcagcaaaggacag
tgtgcacaggattcaataccagatcatgttcccagtgcccaccagtttggccttgctaaa
ggcagccacatagtactgccttttaatcagtctaccgtcagaaggaaactttctgtccag
ctgaatctgagaacctatgcctctagtggcctgatttactacctggctcaccagaaccag
attgattatgcagcccttcagcttcatgggggacaactctatttcttatttgatcttgga
aaaggaaaagcagtagcctttcaccctgctgccatcagtgatggcaaatggcacacggta
aagacagagtatgttaaacgaaaaggcataatcaccgtcgatggacaggaatctgcagca
gttaatgctctgggagatggtaacacgttggatgtggaagggaagctctatctgggaggg
cttcctttagattatacagctagaaatactggaaatgtcactcacagtatccctgcatgc
attggcagtgtgatgattaacaacaagcaacttgacaaagagagccctgtctccatcctt
gctgtgaataaatgctatgcaacagcacaggaaggcactttctttgatggaagcgggttt
gctgctctagtcaaagaaggttataaagtccgatctgatgtgaacgttacgtttgagttc
cgcaccatggctatgaatggagttcttcttggaatcagtagtgctaaagtagatgccatt
ggactggagattgtgaatggcaaggttttgttccatgtcaacaatggagctggcagaata
acagccacatatgaaccacaaggtgcaaatagcttatgtgatggaaagtggcacaagctt
caagcaaacaaaagcaagcatcgcattgctctgatgattgatgggaatttggttcaggct
gataatccccacatccagtcaacatctgcagatacaaacaatcccatttatgttggaggc
tttccagctgatatgaagcaaaactgtctgacaagcaagaactcgttccatgggtgtttg
agaaaccttaagctgattaagggccaactggtagaatcctatgacttcagcaaagccttt
gacctgcatggcgtgtttcctcattcgtgccctgggtctgagcactaa
DBGET
integrated database retrieval system
