Caretta caretta (Loggerhead turtle): 125632440
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Entry
125632440 CDS
T09292
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125632440 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccay01009
]
125632440 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125632440 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125632440 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ccay01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125632440 (RB1CC1)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125632440 (RB1CC1)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125632440 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
125632440
NCBI-ProteinID:
XP_048696607
LinkDB
All DBs
Position
2:complement(194739641..194900938)
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFVVNTGTTLTFDTELAVQNVSDLKHAIQTKYKIAIQHQVLVVNGGECMAADRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENAYSNYLQ
SIDDIKLKLTHLGTAVSVMSKIPLLECLTRHSYRECLGRLDSSVGHGGAKSEETEDEKSA
ELVLSSDIPRVHNKSLLASFCKSVEHSALDSTDPGNVKENRESSQNTTIEESKTSEELNE
SDLSSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFLVECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKDLAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALFRLVTE
LLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLTDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVIALHNLVKAAQSLDEMSQTITDLLNEQKISNSQASPQSATTPRMES
AKGTTIATSSRTPPSLSLQGPLCPPVCPPAPLDELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPSSPHIVSDPQSPEMMVESLYSSVINAIDSR
RMQDTNICVKEDSLNVRMEKCRVVAQESQFNLRNIKEDLCHFRTFVQKEQCDFSNSLKCT
SVEIRNIIQKVKFSLEKTLKDKHQKELQSLKSEYETRIDTLLGDVEENKKKIKKLTGDLI
GLEEVLQNKDNEFAMVKNEKEAVVCLQNEKDRKLLALEGQMKNQNCEIKELRQSREMVLE
DLKKLHIENDEKIHLLRAELQSLEQSHLKELENNLQIRHTQEFEKLIAEHKDCLDKLEKE
NQQRFEQMQESHAAVVQDKEQQIEELKLKVSDLFDLRCKLEVELALKETETDEMKMLLEE
SRTQQQEILKSFIDKETENLRKELDNLNHKIQVNNDEYQVGLVELRTLMTIEKDQCISEL
VDRHEEETNVLKIELNKVTSLHQKAFEVEKSLKEQIIELQSKLEVEANALEKQKEEKLAV
SEQKDKFEHLIHNLEEEKELLITNEEQERKLLIQRLNIEKEDAIRMTLKEFELQRKAVEK
ELLEKIQLLEMQVNQSPSIELSAASSLVIELQEKLEEEKIKFLEQLEEQEKRKNEEMQNF
RMSLTAEQQTNFNTVLTREKMKKENIINDLSDKLKTITQQQERDKDLIETLSEDRARLLE
EKKKLEEDVNKMRSSNFIPSAHLPTSSESCGACAPDLPAETERVASEITDEGRLDSAMET
SMMAVHENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttgtggtcaacactggaactaccctcacctttgacacagaactt
gcggtacaaaatgtgtctgaccttaaacatgcaatccaaaccaagtataagattgccatt
cagcaccaggtactggttgtcaatggaggggagtgtatggcagcagacagaagagtctgt
agttacagtgctggaacagacacaaacccaatttttctgttcaacaaagagatgatctta
tgtgaacgcccaccagctattcccaaaaccacattttcagcagagaatgagatggaatta
aaagttgaagaatctctcatgatgcctgcagtttttcacacggtagcttcgcggacacag
cttgctgtggaaatgtatgaggttgcaaagaagctttgttccttttgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgccataatggccaatttggaagattgc
acatattcttatcaaaagctgcttttcaagtttgaaaatgcatattcaaactatctgcag
tccatagatgatattaagctgaaactcacacacttggggacagctgtttctgtcatgtcc
aagatcccactgctggagtgcctaaccagacatagttacagagagtgtttaggaagattg
gattcttctgttgggcatggaggggcaaaaagtgaagaaactgaagatgagaagtctgct
gaactggtgctttcttctgatatacctagagtgcacaataaatcacttttagcctcattt
tgcaagtctgtggagcattcagccctggacagcacagatcccggaaatgtcaaagaaaat
agggaatccagtcaaaacactactattgaggagagtaaaacttcagaggagcttaacgag
agtgatctgtcttccttcaatgtctctctgttggactggataaatgttcaagatagacct
aatgatgtggaatcattagtcagaaaatgttttgattctatgagcagacttgatccaaag
atcattcagccctttttggtagaatgtcgacaaactattgccaaactagataatcaaaac
atgaaggcgattaaagggcttgaggacaggctttatgcattggaccagatgatagctagc
tgcagcagactagtaaatgaacaaaaagaccttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacaggaaactgttagatattaagcagaaatgtacc
actgccaaacaagagcttgcaaataatctacaagtcagactaaaatggtgttgctttgtg
atgcttcatgcggaccaagatggagagaaactgcaagccttgtttcgccttgtaacagag
ctgctagaaagagtcaagattgtagaggctctcagtactgttcctcaaatgtactgttta
gctgttgttgaggttgtaaggagaaaaatgtttataaaacactacagggagtgggctggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
gggaaattgtttaggaagtcttttttaaggaatcgtttgtttaggggacttgactcttgg
cctccatccttttgtacacgaaagcctcgcaggtttgacagtgaacttccagatatctca
ttaactgacttgcagtttctgcagtctttttgtccttcagaagtgcaaccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtaattgctctacataacctg
gtaaaagcagcacaaagtttggatgaaatgtcgcagaccattacagacctgctgaatgag
caaaagatctccaatagtcaagcatcaccacaatctgctactacaccaaggatggaaagt
gctaaaggaaccacaattgctacctcttctagaactcctccatcactcagtcttcagggt
cccttgtgtcctcctgtgtgtcccccagctccattagatgaattgtctccagacagcatt
gatgctcatacatttgattttgaaacaatcgctcatccaaacttagagcaagcccttaag
caagggtctttggacttggattcactagcagaaagtccagagtcggactttatgtcagca
gtgaatgagtttgtaatagaggaaaatccatcatctcctcatattgtaagtgatccacaa
agtccagaaatgatggtggagtccctctattcttcagttatcaatgcaatagacagtaga
cgtatgcaagacacaaatatttgtgtaaaggaggattctctaaatgttcgcatggagaag
tgtagagttgttgcccaggaatcacagtttaatttaagaaacataaaagaagacctttgt
cactttagaacatttgtacaaaaagaacagtgtgacttttcaaattctttaaaatgtaca
tcagtagaaataaggaatattatacaaaaagtaaaattttcacttgaaaaaacactgaaa
gataaacatcaaaaagaattgcaatctttgaaaagtgagtatgaaactagaattgataca
ttgctaggagacgttgaagaaaacaaaaaaaagattaaaaagttaacgggagacttaata
ggtcttgaagaagttttgcaaaataaagataatgaatttgcgatggtgaagaatgaaaaa
gaagccgttgtttgtctgcagaatgagaaagatcggaaattacttgcattggaaggccaa
atgaagaatcagaattgtgaaattaaagaactgagacagtcacgtgagatggtattggaa
gatttgaaaaagcttcatattgaaaatgatgaaaaaattcatcttttgagggcagagctt
cagagtttggagcaaagtcaccttaaagaattggaaaacaatctacaaatcaggcatact
caggaatttgagaaactaatagctgagcacaaggattgtttagataagttagaaaaagaa
aaccagcagagattcgaacaaatgcaggaatctcatgcagcagttgtccaagataaggag
caacagatagaggagttaaaactcaaagtttctgatctgtttgacttgaggtgcaaatta
gaagttgaacttgcactgaaggaaacagaaaccgatgaaatgaagatgttgttggaagaa
agcagaactcagcaacaggagatcctaaagtcctttattgataaggaaactgaaaattta
agaaaggagttagataacttaaaccataagatacaagttaataatgatgaatatcaggtg
ggcctagtagagctaagaactttaatgacaattgagaaagatcagtgtatttcagaatta
gtggacagacatgaagaagaaacaaatgtacttaaaattgaattaaacaaagtaacctct
ttacatcaaaaagcttttgaagtagaaaaaagtctcaaagaacaaataatagaactacag
agtaaattagaagtggaagcgaatgccctagaaaagcaaaaagaggaaaaattggctgtg
tctgaacagaaggacaaatttgaacatcttattcataatcttgaggaggaaaaagaactg
ttaataactaacgaagaacaggaaagaaaactacttattcaaaggctcaatattgaaaaa
gaggatgcaatacgaatgacccttaaagagtttgaattacagaggaaagctgttgaaaaa
gaactcttggaaaaaatacaactacttgagatgcaagtaaatcagagtccttccattgaa
ttatctgctgcatcaagcttggttattgagcttcaagaaaaacttgaggaagagaaaata
aaatttctggagcaacttgaagagcaagagaaaagaaagaatgaagaaatgcaaaacttt
agaatgtctctgactgcagaacagcagaccaattttaacaccgtgctgacaagagaaaaa
atgaagaaagaaaacataataaacgatcttagtgacaaattaaaaacaataacccaacag
caagaaagggataaggatttgattgaaacactttctgaagatcgtgctcgattactggaa
gagaagaaaaaacttgaagaagacgtgaataagatgagaagcagtaattttattccatct
gcacatttacctacatcttcagagtcttgtggagcctgtgcacctgatctcccagctgaa
acagagagagtggcttcagagattacagatgaaggaaggctggattctgcaatggaaact
agcatgatggctgtgcatgaaaacatccatatgttgtctgaagaaaaacagaggataatg
ttgttagaaagaacactacaacttaaagaagaggaaaataagcgattaaatcaaagattg
atgtcccaaagcatgtcttcagtgtcttcaagacattctgaaaaaatagctatccgagat
tttcaggttggcgatttggttctcattatcttggacgaacgccatgacaactatgtatta
tttactgtcagtccaacattgtatttcttacattcagagtctcttgctgcgctggatctg
aagccaggtgagtgtgcttcaggtgcatctagaagaccttgggtgctaggaaaagtaatg
gaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagttcctttaggtaca
aagttctacagagtgaaagcagtgccgtggaacaaaaaagtataa
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integrated database retrieval system
