Caretta caretta (Loggerhead turtle): 125632488
Help
Entry
125632488 CDS
T09292
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125632488 (CHD7)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125632488 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125632488
NCBI-ProteinID:
XP_048696708
LinkDB
All DBs
Position
2:200027574..200212581
Genome browser
AA seq
3005 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENTVNPMGQQMPIDQGFPSLQSSLHHPPTN
QNQAKLTHFDHYNQYEQQKIHLMDQPNRMMSNAPGNGIASPHSQYHNPPVPQVPHGSGTG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQPTQPPQTPSGPPGQG
HSQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLSHVPQ
QNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVP
SPTINNSGQYSRYPYSNLNQGLVNNTGINQNLGLTNNTPMNQSVPRYTNAVGFPSNSSQG
LMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGI
PMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSTPREMGGHMRPNGC
PGVGLSDPQAIQERLISGQQHPSQQPSFQQQMPTCPPMPPHPGIHHQSSPPPHPHHQPWG
QLHQSPQNTPQKVPVLQHSPSEPFVEKPVPDMTQVSGLNTQLVKNDDYLPPIEQQPQQKK
KKKKNNHILAEGPSKGFGKEDFPGGLDSQDQTRNSLDCSQEEKKKKKKPKSKKELKDPKE
PKEKKEPKEPKPPKTPKPPKEPKEKKAKNTTPKPKTSKKTSNKKPDSETSAVKKKVNKGK
EGSENSDLEKTPPPSPHEEEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGR
DSPSNTSQSELQESADAEGPVVEKIMSSRSVKKQMENEEEVETEEFYVKYKNFSYLHCQW
ASVEQLDKDKRIQQKVKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSHSTDDNGEP
VTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPQMERVERPPADDWKKSESSR
EYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPCTKPRRLQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRPLMEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKAQSSQPVLQDADWLASCNPDVLFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPTDWWDKEADKSLLIGVFK
HGYEKYNSMRADPSLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPT
RTPFKDEIDEFANSPPEDKEESIESHTTSKHSESNAELGQLYWPTTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGIIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFNCFVTMCRRVCRMPAKPDEEPPDLS
TMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLDAHRNFAQNRGAGNASSVSSLNPLGAGCSQTPPIV
PSTPVQDDKATEQAESKIEGSENSAAKEKSDIKEETDITEKGIKQECDAEAEPGPVKCER
KAIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGTVSQGKNFDEESNASMST
ARDETRDGFYLEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQ
MFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASISGSEDISASPQLSKANALNLSVPR
QRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNF
SSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKN
VEGLDLLFMSNKRTSLTVEDAEVTKVFEDDMETPPARNIPSPGQLDPDTRIPVINLEDGT
RLVGEDAPKNKDLIEWLKSHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDI
NTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPES
MFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSL
QNLQNLQSLQLAGLMGFPPGLATAAAAGGDSKNPAAMLPLMLPGMAGLPNMFGLGGLLNN
PITAAPGNTTPASSQGETEDGTSKAEEKKNENEEENKDSEKSTDVVSATDSANGSVSAPT
AATATSNNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPGLAGLQNAVG
SNEEKATDKTEGAAFKEEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDGGDEIEN
NENDE
NT seq
9018 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctatttggagaagatgggaatattttcagtgaaggg
ctggaaagtcttggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccattgatcaaggattcccctccttacagtcttctcttcatcatcctcccaccaat
caaaaccaagcaaagttgacccactttgatcactataatcaatatgaacagcaaaaaata
catctgatggatcagcctaacagaatgatgagtaatgctcctgggaatggtatagcatct
cctcactcacagtatcacaaccctccagttcctcaggttcctcatggtagtggcactggt
ggtcagatgggagtctatcctagtatgcagaatgaaaggcacgggcaaccctttgtagac
agtggctccatgtggggaccacgggctgttcaggtgcccgaccaaataagagcaccatac
cagcagcagcagcaaccgacgcagccaccacagacaccgtcaggaccccctgggcagggc
cattctcagcacatgcagcagatgggaaactacatggctcgtggtgatttttcaatgcaa
cagcatggtcagccacaacagcagaggatgaaccagttttctcaaggtcaagaaggcctt
aatcagggaaatcctttcattgccacctcaggacctggccacttgtctcatgtgccccaa
cagaatcccagtatggcaccttctttgcgacactcagtccaacaatttcaccaccatccc
cccactgcgctccatggagaatcagtagcccacagtcccagattctcccctaatcctcct
cagcagggtgctgttaggccacaaacacttaattttagttctcggagccagacagtaccc
tcacctactataaacaactcaggtcagtattctcgatatccttacagtaacctaaatcag
ggattagttaacaatacagggataaatcagaatttaggccttacaaataacactccaatg
aatcaatctgtaccaagatacacaaatgctgtaggatttccatcaaacagcagtcaagga
ctaatgcaccagcagcccattcaccctagtggctcactcaaccaaatgaacacacaaact
atgcacccttcacagcctcagggaacttatgcctctccacctcccatgtcacctatgaaa
gcaatgagtaatccagcaggtacccctcctccacaggttaggcctggtagtgctggaata
ccaatggaagttggtagttatccaaatataccccatcctcaaccgtcacaccagccccct
ggtgccatgggaattggacagaggaatatgggcccccgaaacatgcaacagagtcgtcca
tttatgggtatgtcttcaactccacgggagatgggtgggcacatgagaccaaatggttgt
ccaggtgttggcctttcagatccacaagcaatacaagaacgactgatatctggccagcag
catcccagccaacagccgtcttttcaacagcaaatgccaacttgtcctcccatgccacct
catccagggatacatcatcagtcttcaccgccaccacatccccaccaccagccttgggga
cagcttcaccagtcaccacagaatacaccacaaaaagtgcctgtccttcagcattctcca
tcggagccctttgtagagaaaccagtgccggatatgactcaggttagtggactgaatacc
cagctagtgaaaaatgatgattacctgccaccgattgaacagcagcctcagcaaaagaag
aagaaaaagaaaaacaatcacattcttgcagagggtcctagtaaaggttttggtaaggaa
gattttcctggtggtcttgacagccaggatcaaaccagaaactcattggattgctcccaa
gaagagaaaaagaaaaagaaaaagcccaagtcaaaaaaggagctgaaggatcctaaagaa
cccaaggaaaagaaggagcctaaggaacccaagcctcccaaaacccccaagcctcccaaa
gagccaaaggaaaagaaagcaaaaaataccacaccaaaacccaagaccagcaaaaagaca
agtaacaagaaaccagactcagaaactagtgcagtgaagaaaaaggtcaacaagggaaag
gaaggttctgaaaactcggatttagagaaaacaccaccaccatctcctcatgaagaagaa
gatgacccaggcgttcagaaaaggcgatccagcaggcaggttaagagaaaacgttacaca
gaagacctggagttcaagatttcagatgaggaggctgatgatgcggatgctgcaggaaga
gactctccttcaaatacgtctcagtcagagctacaggaatcggctgatgctgaaggtcca
gtagtagaaaaaataatgagtagtcgttcagtcaagaaacagatggagaatgaagaggaa
gtggaaacagaggaattctatgtaaagtataaaaacttctcttaccttcattgtcagtgg
gcatctgtagaacagttggacaaagacaagagaattcagcaaaaggttaagcggtttaag
gcaaagcagggtcagaacaagttcctttcagagattgatgatgagctttttaatccagac
tatgtggaagttgatagaataatggatttttcacatagcacagatgataatggagagcct
gttactcattatctggtgaagtggtgttcacttccttatgaagacagcacatgggagctg
aagcaagacatagaccaagctaagattgaagaatttgagaaactgatgtctagggagcca
caaatggagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccaga
gagtacaaaaacaataacaaactcagggaataccagttggagggagtaaactggcttctt
ttcaactggtacaacacacgaaactgcattttagcagatgaaatggggttgggaaaaact
atacagtctattacatttctctatgagatctatttgaaaggaatccacggtcctttcttg
gttattgctccactgtccacaattcctaactgggaaagggagttccgcacctggacagag
ttgaatgttgttgtgtatcatgggagtcaagccagccggcggaccattcagttatatgaa
atgtacttcaaagatccacagggtcgggtaataaaggggtcctataagtttcatgctatc
atcactacttttgaaatgattttgactgactgccctgagctgcgtaacattccatggcgt
tgtgtagtaattgatgaagcccacaggctgaagaacaggaattgcaagcttttggaagga
ctgaagatgatggacctggaacacaaggtgttgctcactggtaccccattacagaacact
gtagaagagctgttcagcttgcttcatttcttggagccaggtcgcttcccgtcagaaacc
acattcatgcaagagtttggtgatctgaaaactgaagaacaggtgcaaaagctccaagcc
attttgaagccgatgatgttgagacgccttaaagaggatgtagaaaagaacctggccccc
aaagaagaaaccatcattgaagttgagctgacaaacattcagaagaaatactatcgtgct
attcttgaaaagaatttcacatttctctccaagggcggtggtcaagctaatgtacctaat
cttttaaacactatgatggaactaagaaaatgctgcaatcatccatatcttattaatggt
gctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagatttt
cagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctgcca
aaattgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggac
atactggaagactacctcattcaaagacggtacccatacgagcgaattgatggtcgagta
agaggcaaccttcgtcaggcagctattgacaggttttccaggcctgattctgatagattt
gttttcctgctgtgtacaagggcaggaggtttaggcattaatcttactgctgctgatacc
tgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagctcgatgt
caccgaattggacagagcaaatcagtgaaaatctacaggttgatcacaaggaattcttat
gaaagagaaatgtttgacaaagctagtttaaagcttggccttgataaagctgtactgcag
tcaatgagtggaagagaaaatgctacaaatggggtacagcagctttctaagaaagaaata
gaagatctcctacgaaagggggcttatggtgctcttatggatgaggaggatgaagggtcc
aaattttgtgaagaagacattgatcagattctcctaaggcgaacacacacaattactatt
gagtctgaagggaaaggctcaacatttgctaaggctagttttgttgcatctggtaacagg
acagacatttccttggatgaccccaatttctggcagaagtgggctaagaaggctgagttg
gatattgatgccttaaatggaaggaacaacctagttattgatacaccaagagtaagaaag
caaaccaggctgtatagtgcagtcaaagaagatgaattaatggagttttcagacctggaa
agtgattctgaagaaaagccctgtacaaagccccgtagacttcaggacaaatcccagggt
tatgcaaggagtgaatgttttagagtggagaagaaccttttggtctatggttggggtcgg
tggacagacatcctctcacatgggcgctataaacgtccgctaatggaacaagatgtggaa
accatctgccggacaatcctggtatattgtcttaatcactacaaaggagatgaaaatatc
aaaagtttcatctgggatctgatcactccaactgcagatggacaaacacgagccttggtt
aaccactctggcctatctgcaccagtgcccaggggaaggaaaggcaaaaaagtgaaagcc
cagagttcacagccagtgctgcaagatgctgattggctggcaagctgtaatccagatgtc
ttgtttcaagaggacagctataagaaacacctcaaacatcactgtaataaggtcctgctg
cgtgtccgcatgctgtactatctaagacaagaagttataggggaccaagcagacaagatc
ttagagggtgctgactcaagtgaagtagatgtgtggatacctgaaccattccatgctgag
gttcctacagactggtgggataaagaagcagataaatccctcttaattggagtattcaaa
catggctatgagaagtacaattctatgagagctgacccttcgctgtgctttctggaacgg
gttggtatgcctgatgccaaggccatagctgctgaacagagagggacagatatgttagca
gatggtggtgatggaggagagtttgacagagaggatgaagatccagaatataaaccaacc
agaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagataaagaa
gaatccatagagagccacacgacaagcaagcacagtgaaagcaatgctgagttaggccaa
ctctactggcccaccacttcaaccctgactacccgtctgcgtcgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagacggaccgacgg
agacgtcggcctagggaggaagtgagagcactagaagcagaaagagaagctataataact
gaaaaacgtcaaaaatggacaagaagagaagaagcggatttttatcgtgtagtttctact
tttgggattatttttgaccctatgaaacagcagtttgactggaaccagttcagagctttt
gctaggctcgataagaagtccgatgaaagtttggagaagtacttcaattgttttgtgact
atgtgcaggcgggtatgccgaatgccagccaaaccagatgaagaaccacctgatctttcc
accatgattgagccaatcacagaggagcgtgcatctagaactttatatcgcatagaactg
ttacggaaaatccgtgagcaggttctccatcaccctcagttgggggagaggctaaaattg
tgccagccaagcttggatctgccagagtggtgggagtgtggtaaacatgacaaagactta
ctgattggtgctgctaaacatggagtcagtagaacagattatcacatcctgaatgaccct
gaactctcttttcttgatgcccacagaaattttgctcaaaacagaggggcaggtaatgca
agtagtgtgtcttcactaaacccactgggtgctggctgcagtcaaacgccccctattgtt
ccatccacaccagtacaagacgacaaggctacagaacaagctgagtctaaaattgagggg
tctgaaaattcagcagccaaagaaaagtctgatattaaagaggagacagatattacagaa
aaaggcattaagcaggaatgtgatgctgaggctgagcctggacctgttaaatgtgaaagg
aaagctatagaaatgagtacagatgtagatccaaaatctatttctgaaaaaggttcagaa
gaggacgaagaggagaaacttgatgatgatgacaaatcagaagagtcctcccaacctgaa
gcaggaacagtttctcagggtaagaattttgatgaagaaagcaatgcatctatgagcact
gcaagggatgaaacccgtgatggattctatttggaagatggagatccttcagtcgctcag
ttgcttcatgagagaacgtttgccttttctttctggcctaaggaccgagtaatgatcaac
cgattagacaacatctgtgaagcagtgctaaaagggaagtggccagtaaataggcgccag
atgtttgatttccaggggctcatacctgggtatactccgacagctgtggacagccctcta
cagaaaaggagctttgcagagctctccatggttggtcaagccagcatcagtggtagtgaa
gatatctctgcttctcctcagttgtcaaaggcaaatgcactcaatttatcagtcccacgt
cagcggaggaggagacggagaaagattgaaattgaggctgagagagcggccaagaggaga
aatcttatggaaatggttgcccagttacgagagtctcaggtggtctcagaaaatggacaa
gaaaaagttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttt
tcatctgttacttctaagtttatcttgcctaatgtgtccacaccagtgtctgatgccttt
aaaactcaaatggagttgctgcaagcaggtctttcacgcacacccacaaggcatctacta
aatggttctttaatggatggagaaccgcccatgaagaggaggagaggaaggaggaaaaat
gtagaagggcttgatctattgtttatgagcaacaaacggacatcgctgactgttgaggat
gcagaagtgaccaaagtatttgaagacgatatggagaccccaccagcaagaaacattcca
tctcctggacaactggacccagacactcggatccctgtaattaacttagaggatgggacc
aggctggtgggagaggatgctcctaaaaacaaggatttaattgaatggcttaaatcacat
cctacctatactgttgatatgccaagttatgtaccaaagagtgcagatgtgctgttttcc
ccatttcagaagccgaagcaaaaacgacacagatgtcgaaaccctaataaattggatata
aacacgttgacaggagaagagagggtacccgttgtaaataaacgaaatggaaagaagatg
ggtggagctatggcccctccaatgaaggacctgccaaggtggttggaagaaaatcctgaa
tttgctgttgctccagactggactgatattgttaagcagtctggttttgttccagagtcc
atgtttgaccgtcttctcacaggaccagttgtgagagaggaaggagcaagcagaagagga
agaaggccaaaaagtgaaattgccaaagcagctgcagcagctgccgctgtagcttcaact
tcgggaatcaacccactgctaatgaacagtctatttgctggaatggacctcacaagcctt
cagaatctacagaatctacagtctctccagcttgccggtctcatgggcttccctccagga
ctagcaacagctgcggctgctggaggtgattctaaaaatccagctgccatgctgcctctg
atgttgccagggatggcaggattgcccaacatgtttggactgggtggattgttgaataac
cccataacagctgctcctggaaacaccactcctgcctccagtcaaggagaaactgaagat
ggcacttcaaaagcagaagagaagaaaaatgagaacgaagaggagaacaaagactctgag
aaaagcacagacgttgtttctgctactgactctgcaaatggatctgtcagtgctcccact
gctgccaccgccaccagcaacaacactggattgcccacaaaccctctggccttcaatcct
ttcctgctgtccaccatggctcctggcctgttctacccatctatgtttctacctccagga
ctgggaggattgacactgcctggtttcccaggattagccggacttcagaatgcagtgggc
tccaatgaagaaaaggctactgacaaaactgaaggggctgcatttaaagaagaggagaat
ttagaaggcagtgatgcagaggagagccttgataaaactgcagattcctccgttttagaa
gatgaaatagcacagggtgaagaattagactcgcttgacgggggggatgaaatagaaaac
aatgaaaatgatgaataa
DBGET
integrated database retrieval system
