Caretta caretta (Loggerhead turtle): 125632662
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Entry
125632662 CDS
T09292
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125632662 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125632662 (RAD54B)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125632662 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
TusA
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125632662
NCBI-ProteinID:
XP_048697173
EnsemblRapid:
ENSCECG00000020436
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All DBs
Position
2:complement(221697715..221820162)
Genome browser
AA seq
996 aa
AA seq
DB search
MRNAAPSKPVQERGEGSGHARVQDSWWSEDERSEHARLNDGRWEERRTHALCGRWLTGAG
GCGGTVDLSALLAEVNMRRSAAPSQRLGNSAKKPRFIPPGKNNTICLKKENEQLVPEIKL
TEVEEKQQNGSRHIRALSRICGININSTQAVESLEEISSMEKCNGENECEAAGMKKVNRP
KAEPVYVPTPEIARHKKEEDEPDCLAKYFSVVWCKASKKKHKKWEGDAVLIAKGKSVILN
DMEGKDIGRGTGYKSKDLESLDEGQTLMIGGKEIEVMGVISAEDFNSGKCFQTGVGSSTT
IPTASSQSTLKPFCSPFKNVCKPSTNKNLLKESQNYKPRHDPNASNSLVMPRPTPDHQRM
FNKAGLPVVDVVVDPYLVNHLRPHQKEGIVFLYECVMGMRLSGRFGAILADEMGLGKTLQ
CISLVWTLLRQGLYGCKPIIKQALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDNKVE
EFINSPLHAVLIISYEMLLRTLDQIQTIEFNLLICDEGHRLKNSSIKTATALLSLSCERR
IILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIIRSREPSATKEEKELGEKR
AAELTRLTGLFILRRTQEIINKFLPPKKESILFCRPTALQLELYRKLLSSRVVRSCLQGV
LENSPHLICIGALKKLCNHPCLLFKAIKEKECNPTCDECEESNLYEGLRDIFPQDYTSTT
FTETDSGKLQVLAKLLAAIRELSPSERIVLVSNYTQTLNILQEMCKHYGYSYTRLDGHTP
VSQRQQIVDSFNNKFRSAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVW
RDGQKHTVHIYRLLTTGSIEEKIYQRQISKQGLSGAVVDLSKTSEHIRFSIEELKNLFIL
HEDSSCVTHDLLECNCMGKKDHQNPSSEKLSVYRGCQLGQHHERADSKKPLSMSQLMQWK
HFSGQHQTLADPFLERIKTSISFIFQNVTNPATPTP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagcacccagcaaacccgttcaagagaggggagagggcagtgggcacgcg
cgggtgcaggatagctggtggagtgaggatgagcgatcggagcatgcgcggttgaacgat
ggccggtgggaggaaaggaggacgcatgcgctgtgtggcaggtggctgacgggagccggt
ggctgcggcgggacggttgacttgagcgcgttactggcagaagtaaatatgaggcgatca
gcagctccaagtcaacgtctagggaattcagctaaaaagccaaggtttatacccccagga
aaaaataacacaatctgtctgaagaaagaaaatgaacagctggttccagaaattaagttg
actgaggtagaagagaaacagcagaatggctctaggcatataagagctctttctagaata
tgtggtataaatataaattctacacaggctgtggaatctcttgaagaaataagctccatg
gaaaagtgtaatggagaaaatgaatgtgaggctgctggaatgaaaaaagtaaatagacct
aaagcagagccagtgtatgtaccaacaccagaaatagcaagacacaagaaagaggaagac
gaacctgactgccttgcaaaatacttcagtgttgtgtggtgtaaggcttcaaagaaaaaa
cacaagaagtgggaaggtgatgctgttcttattgcaaaaggaaagtctgtgatactgaat
gatatggaaggcaaagacattggaagaggtactggatacaaatctaaagaccttgaaagt
cttgatgaaggtcaaacgctgatgattggaggaaaagaaattgaagtgatgggtgtaatt
tcagcagaggactttaatagtggcaaatgttttcagactggtgtagggtcatccaccaca
atcccaactgcttcttcacaaagtaccttgaaaccattctgtagcccattcaaaaatgtc
tgcaaaccaagcactaacaaaaatctacttaaagagtcccaaaactacaaacctcgccat
gatccaaatgcatcaaattctttagttatgccacgtccaactccagatcaccagcggatg
ttcaataaggctggtttacctgtggtagatgtagttgtggatccttaccttgtaaatcat
cttcgcccacatcagaaagaaggaattgtattcctgtacgagtgtgtgatgggaatgaga
ttaagtggcagatttggagctattcttgctgatgaaatgggtttaggaaaaacattgcag
tgcatttcgcttgtctggactctcctacgtcaggggctctatggatgcaaacctataata
aagcaggcactgattgtcacccctgggagtctggtgaagaactggaaaaaagaatttcag
aagtggctgggaagtgaaaggatcaaagtgtttacagttgatcaggataacaaagtagaa
gagttcatcaattccccacttcatgcagttctgataatcagttatgagatgctgctgcgc
accttggaccaaattcaaactatagaatttaacctcctaatctgcgatgagggacatcgt
ttgaaaaacagctccattaagacagctacagccctcctcagtctgtcctgtgagagaaga
attatcctgactggcactccaatacaaaatgacctgcaagaattttacgcattaatagag
tttgtaaatccaggaatacttggttctttgtccacatacagaaaaatatatgaggagcct
attattcggtcccgagagccttcagcaacaaaggaggaaaaggagttaggagagaaaaga
gcagcagaactcactcgcctaactggactgtttattcttagaagaacacaagagatcata
aacaaatttctcccaccgaaaaaagagagcatacttttctgccgaccaacagccttgcag
cttgaactctatagaaaactgcttagttctcgagttgttagatcctgcctacaaggagta
ctagaaaacagtcctcatctgatatgtataggagctttgaaaaaactctgcaaccatccc
tgtcttctgtttaaagccataaaggaaaaagaatgtaatccaacttgtgatgaatgtgag
gaatccaatctttatgaaggtttaagagatattttcccacaagattatacctccaccact
ttcactgaaactgactcaggaaaattacaggtcctggcaaagctgttggcagcgatccgt
gaactcagcccttctgaaagaattgtgttggtatctaattatacacagacattgaatatt
ttgcaagagatgtgcaaacattatggatactcttatacaagactcgatggacacactcct
gtctcccagaggcaacagattgtggatagttttaataataaattccgttcagcgtttatc
tttttgctgagttcgaaggctggcggtgtaggtctgaaccttgttggagcatctcattta
attttgtatgacattgactggaatccagccacagatattcaggcaatggccagggtgtgg
agagatggtcagaaacacactgtgcatatttacagactgctaactacaggatcaatagaa
gaaaagatctatcagagacagatcagcaagcaaggcctttctggggcagttgtagacctt
tccaagacatctgaacacattcgtttttccattgaggaacttaaaaatctctttatacta
catgaagattccagctgtgttacccatgacctgcttgagtgcaactgtatgggaaagaaa
gaccatcaaaatccttcttcagaaaagctctctgtgtatagaggttgccagcttggacaa
catcatgagagggctgattcaaagaaacctctttctatgtcgcagctgatgcaatggaaa
cacttttcggggcagcaccagactcttgctgatcccttccttgaaagaataaagacgagt
atttcttttattttccagaatgtaaccaatccagctactcccactccataa
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