Caretta caretta (Loggerhead turtle): 125632701
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Entry
125632701 CDS
T09292
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125632701 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125632701 (POP1)
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125632701 (POP1)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125632701 (POP1)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125632701 (POP1)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125632701 (POP1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125632701 (POP1)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125632701 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
125632701
NCBI-ProteinID:
XP_048697274
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All DBs
Position
2:224431453..224473251
Genome browser
AA seq
1008 aa
AA seq
DB search
MSNAREKKRAKKMRNQPASVTLSSECGPCHGGIQHHNGGSSSFQTTKQADLHPDSSQEYQ
QQRSQHQSPGPSYRKEQHFSKGQNRGERGRGRGGWGGGRQNVSQEMPKYVTASTFAQARA
AEISVMLKAVTQKSSNSLVFQTLPRHMRRRAMSHNIKRLPRRLREIARKEAEKAVHQKKE
HSKNKCRKARRRHVNLVVEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGDRPTTKSYR
ACYRAMTKHCLLQDLSYYCCLELNGKERELLKVLARMCSIDTGPTFAAVPCLSGRLQGSL
VLYRADRYPEEVLGPITFIWKPQDGSCITSETRQLWIWTHPSLKQEILSELKAVCQCSEP
VETCSPEPIVTLLQEEKQTDVAMCVGRKRKREDNEGETAVPVEKIIGDGTRVPLQSYCWT
SQTTGIVISDLTMEILRYRLIGPLSHCVLTEALKTAPIQTVMADAETELNNWWVENCKNS
EKVSLHQRQEAIFKLLQGISSPSEIAAGTILGLTVGDPRVNLPKKRSKAMPNPEKYQDNE
KVRQLLLEGVPVECAHSFIWDQTICKNVTENKIPEQDLNHMRGELLVPGSQLDLGPRESK
IPILLVQQPGKVAGEDRPGWGSGWDIYLPKGWGMAFWIPFVYRGARVGGLQEGLKHSEYK
RTPHIPNDFPDCPAGIQFAKELENILLEKFKRRPPAKRANYVKLGTLAPFLCPWGQLNRD
WEVRNKAQEESVVTSSADSKSCATQRQVPCEPKPGLIIEDPQSGMMEEMTEIQNLCKEDG
AATSSGFFVLRSRKLLKQLSARCRPTCGKGQRVRPASKLGQKEMTEDALLSLFKCYPRVL
VWVSLSLIRKGSPELHTMICIPTQEDFLQLNKDQLFCGPQEPKHSDIFKHKILKLKERKK
KKNNEKALESGASDALEAKAVEEPKELILGLWPDPLPDVTSHCSRVLLGFVTQGDFSLAA
GCGEALGFVNLTGLLHMLSSQPADKKGLVLLRTPASLQYRFARLNIEV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaagagagaagaaacgagccaagaaaatgagaaatcagcctgctagtgtc
actttatcttctgagtgtggaccatgtcatggtggaatacagcaccataatgggggaagt
agctcttttcaaactacaaaacaagcagatctccatcctgatagttcacaggagtatcag
cagcagagatctcaacatcagtctcctggaccttcgtacaggaaagaacaacatttttct
aaggggcaaaatagaggtgagagaggtagaggaagaggaggttggggaggaggacgccaa
aatgtttctcaagaaatgcctaaatacgtaacagcatctacctttgctcaagcccgtgct
gctgaaatcagtgttatgttgaaggcagttacacagaagtcttccaattcattagtcttt
cagactctgcctaggcacatgcgaagacgagccatgagtcacaatattaaacgcctacct
agacggctccgtgagattgccagaaaagaggcagagaaagctgtgcatcagaaaaaagag
cattcaaagaacaagtgccgaaaagctcgaaggcgtcacgtaaacttggtggtggagttt
aatcgcaggcagaagaagaatatttggttggaaacacatatttggcatgcaaagagattt
catatggtgaagaaatggggatactgcttaggagacagacccacaactaagagctatagg
gcttgctaccgagccatgacaaaacactgccttcttcaggatttatcatattactgttgt
ctggagctgaatggaaaagagagagagcttctgaaggtgcttgctcggatgtgtagtata
gatacagggccaacttttgcagccgtgccttgtctgtctggaaggctccagggctctctg
gtcctttaccgtgcagatcgctaccctgaggaggtgcttggtcctattactttcatttgg
aaaccccaggatgggtcttgtattacttctgaaactagacagctgtggatctggacacat
ccatcccttaagcaggaaatactgagtgagctaaaagcagtctgtcagtgttcagagcct
gtagaaacctgttctcctgaaccaattgtcacactgcttcaagaagaaaaacaaacagat
gtagctatgtgtgttggcaggaaaaggaagagggaagacaatgaaggagaaacagctgtg
ccagtggaaaaaatcattggcgatggaaccagagttccacttcagtcatactgctggaca
tcacaaactactggcattgtgatcagtgatttgaccatggagattctcagatatcggttg
attggcccactctcgcactgtgtccttacagaagcactgaaaactgctcctatccaaact
gtgatggcagatgcagaaacggaacttaacaattggtgggtagaaaactgcaagaattct
gagaaggtgtctcttcatcaacgtcaagaagccatcttcaagttgttgcaagggataagc
tctccatcagaaattgcagcaggtacaatactgggcctgactgttggggatcctcgagtg
aatttgccaaaaaagaggtcaaaagcaatgccaaatccagaaaaatatcaagataatgag
aaagttaggcagctgcttctggaaggtgtgcctgtggaatgtgctcacagctttatctgg
gaccagactatctgtaagaacgttactgaaaataaaatcccagagcaggatttaaaccat
atgagaggtgaactattggtacctggctcacagcttgacttgggtcctcgtgaatccaag
attcccattctcttggttcaacagccagggaaagtggctggtgaagatcgaccaggatgg
ggaagtggctgggatatctatctgccaaagggctggggcatggctttctggattcctttt
gtatatagaggcgcacgagtaggtggcttgcaagagggtttgaaacattccgaatataaa
agaacacctcacattccaaatgatttcccagactgtcctgctggaatccagtttgccaaa
gaactagaaaacattcttcttgaaaaattcaagagacgcccacctgcaaaaagggcaaac
tatgtcaaacttggcaccctggcacctttcctctgtccgtgggggcaactaaacagggac
tgggaagtaagaaacaaagctcaggaagaatctgtggttacttcatctgcagacagtaag
agctgtgcaactcaaaggcaggttccttgtgagcccaaacctggactgattatagaggat
cctcagagtggcatgatggaagaaatgacagagattcaaaatttatgcaaagaagacgga
gctgcaacaagtagtggcttctttgttctcaggagcagaaagctactaaagcagttgtca
gccaggtgccggcctacttgtggaaaaggtcagagggtacgccctgcttcaaaacttgga
cagaaggaaatgactgaagatgcccttttatcactctttaagtgctacccaagggtgctg
gtgtgggtcagcttgtctctgataagaaaaggtagccctgaattacataccatgatatgc
attccaacacaggaggattttctacagcttaacaaagaccagctcttctgtggtcctcaa
gagcccaaacacagtgacatattcaaacacaagatactgaaactcaaagagagaaaaaag
aaaaagaacaacgagaaggctctagaaagtggtgcttctgatgcccttgaggcaaaggca
gttgaggagcctaaagaactaatacttggcttatggcctgaccctctaccagatgttact
tcacactgctctagagttcttttaggttttgtcactcaaggggatttttcattagctgct
ggctgtggagaagcactgggatttgttaatttgacaggattactgcatatgttatccagt
caaccagctgataaaaaagggcttgttttgttaagaactccagcatctctacagtacaga
tttgctagacttaatattgaggtataa
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