Caretta caretta (Loggerhead turtle): 125632745
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Entry
125632745 CDS
T09292
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125632745 (DCAF13)
04121 Ubiquitin system [BR:
ccay04121
]
125632745 (DCAF13)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
90S particles
Other 90S particles
125632745 (DCAF13)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125632745 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
MIOS_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
125632745
NCBI-ProteinID:
XP_048697410
LinkDB
All DBs
Position
2:228670519..228714086
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AA seq
446 aa
AA seq
DB search
MRVKVLSRNPDDYIRETKQDLQRVPRNYDPALHPFEVPREYMRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPHSLSTILSGACDGEVKIWNLTKRECIRTLQAHEGFVRGICARFC
GTSFFTVGDDKTVKHWKMDGPGYGGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGHQVD
IWDEQRTSPICSLTWGVDSISSVKFNPIEMYLLGSCASDRNIVLYDMRQSTPLKKVILDM
RTNTLCWNPMEAFIFTSANEDHNLYTFDMRFLESPVMVHIDHVSAVLDVDYSPTGKEFVS
ASFDKSIRIFPVDKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEK
LGVLVPRERAAMNYNQKLKEKFQHHPQIKRIARHRHLPKAIYSQAKELRIMREARRRKEL
NRRKHSKPGSSPFVPEKKKHIVAVVK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggtgctgagccggaacccggatgattacatccgcgagaccaagcaggat
ctccagcgcgttccaagaaactatgatcctgcattgcatccatttgaggttccacgagag
tatatgcgagccctgaatgcaacaaaattagaacgtgtgtttgcaaaaccttttcttgct
tcactggatggtcacagggatggagttaattgtatggctaagcatccacatagtttgtct
acaatactttctggggcctgtgatggagaggttaaaatttggaacttgaccaagcgagaa
tgcatccgtactttacaagcgcatgagggctttgtacgagggatatgtgcccgcttttgt
ggtacttctttcttcaccgttggtgatgataaaactgtgaagcactggaaaatggatggc
ccaggatatgggggagaagaagaagaaccactgcatacaattcttggaaagacagtgtac
acaggaattgatcaccactggaaggaagctgtatttgcaacttgtgggcatcaagtagac
atctgggatgaacaaaggaccagtcccatatgctctttgacatggggtgttgatagcatc
agcagtgttaaatttaatccaattgagatgtatcttttgggaagctgtgcttcagacaga
aatattgtgctgtatgacatgaggcaatcaactccattaaagaaggttatcttggacatg
aggacaaatacgctctgttggaaccccatggaagcttttattttcacttcagcaaatgag
gaccacaacttatatacatttgatatgcgttttcttgagtcacctgtaatggttcacatt
gatcatgtgtctgcagttcttgatgtggattactcccccactgggaaagaatttgtgtct
gccagctttgataaatctattcgcatttttcctgtagacaaaggtcacagcagagaggta
tatcatacaaagcgaatgcagcatgtcatcactgtcaagtggacctctgacaacaagtac
attctgtgtggctcagatgagatgaacattcgtctgtggaaagctaatgcttctgaaaaa
ctgggcgtgctcgtaccacgagagagagcagctatgaattacaaccaaaagttgaaggag
aagttccaacaccacccacagatcaagcgcatagctcgtcaccgtcacctgcccaaagcc
atctatagccaggccaaggagctgcgcatcatgcgagaagctcgtcggcgaaaggaactg
aatcgccgtaaacacagcaaaccaggatcctcgccctttgtgccagaaaagaagaagcac
attgtggctgtagtgaaataa
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integrated database retrieval system
