Caretta caretta (Loggerhead turtle): 125632800
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Entry
125632800 CDS
T09292
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccay00535
]
125632800 (COL14A1)
Proteoglycans [BR:
ccay00535
]
Extracellular matrix (ECM) proteoglycans
Others
125632800 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
vWA_SIBA-E
VWA_3
Motif
Other DBs
NCBI-GeneID:
125632800
NCBI-ProteinID:
XP_048697520
LinkDB
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Position
2:240610629..240781428
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AA seq
1886 aa
AA seq
DB search
MKVCRYKIHSWFLLAFLAVHLISHVQGQVAPPTRLRYNLVTHDSVQISWKAPKGKFTGFK
LLVTPSSGGKTNQLTLQNSATKAIIQGLIPDQSYAVQIIASNKDQESKPAQGQFRIKDLE
RKKETSSKSKVKGTEGQGYGSKPSPSTEESQFTCKTPAIADIVILIDGSWSIGRYNFRLV
RLFLENLVGAFNVGSEKTRIGLAQYSGDPRIEWHLNAFSTKDAVLDAVRNLPYKGGNTLT
GLALTFILENSFKPEAGARPNVSKIGILVTDGKSQDDVIPPAKNLRDAGVELFAIGVKNA
DINELKEIASEPDSTHVYNVADFNFMHTIVESLTRTVCSRVEEQEKEIKGTFVATLGAPT
NLVTSEVTARGFRVSWTHAPGEVEKYRVVYYPTRGGQPEEVVVDGSVSTAVLKNLMSLTE
YQIAVFAIYISAASEGLRGSETTLALPTASNLQLYDVSQSSMRAKWNGVVGATGYMILYA
PLTEGLAADEKEMKIGEALTDIELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSP
PRNLRFSDIGHSTSRITWDPASENVNGYRIMYVKTDGTETNEVEADRVSTYTLKRLTSLT
EYTVAIFSLYDEGQSEPLTGSFTTKKVPAPQYVEIDEVSTDSFRVNWKHISSDIARYRLA
WTPLNGGASEEVVLDGDKDTHVVEGLLSDTEYEVSLLAVYSDESESDVVAVLGTTLARTT
TVSTSIATTSPATSRPTTAVFRTGIRNLVIDDETTSSLRVTWDVSDNNIHQFRVTYLISK
GDRAEEVVMVPGRQNNLLLQQLLSDTVYKVTVTPIYSDGEGVGVSAPGKTLPLSAPRNLR
VSDEWYNRLRISWDAPPSPTMGYRIVYKPIKIPGPALETFVGDDINTILILNLFSGTEYS
IKVFASYSTGFSDALAGTAKTLYLGVTNLDAYQVRMTSICAQWQLHRHATAYRIVIESLV
DGKKKEVTLGGGTSRHCFFELMPGTEYKISVYAQLQEIEGPGVSIMETTLPFPTQPPTSP
STIAPPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIIGFLYSTVGALDRIGPDGT
QVAIAQFSDDPRTEFKLNVYKTKETLLEAIQHIAYKGGNTKTGKAIKHAQEALFTTDSGI
RRGIPKVLVVITDGRSQDDVNKVSREMQLDGFSIFAIGVADADYSELVNIGSKPSERHVF
FVDDFDAFKKIEDELITFVCETASATCPLVYKDGNSLAGFKMMEMFGLVEKEFSTVEGVS
MEPGTFNAYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILN
EKYEPLVGVILDNDGKTLIFFNYDYKGDFQTVTFEGPEIKKIFYGSFHKLHVVISKTTAK
IIVDCKQVSEKTINAAGNITSDGIEVLGRMVRSRGQRDNSAPFQLQMFDIVCTTSWANRD
KCCELPALRDEESCPSLPHSCSCSEFSKGPLGPPGPPGGPGVRGPKGHHGDQGPKGLDGP
RGEVGAPGPQGHPGPQGPSGLSIQGLPGTPGEKGEKGDRGLPGQQGVPGASGPPGRDGTQ
GQRGAPGKDGPTGPQGPPGPVGIPGAPGVPGVTGNTGPQGGVGPPGAPGAKGERGERGDI
QSQAMVRAVAHQVCEQLIQGHMARYNSILNQIPSQSVSERTIPGPPGEPGRPGSPGSQGE
QGAPGRPGFPGNPGQPGRPGERGLPGEKGERGNPGVGTQGPRGPPGPAGPSGESRTGSPG
PPGSPGQRGPAGHTGVPGPQGPSGPPGYCDPSSCAGYDVGGGYGDATDQDIPVVQLPHNS
YQIYDPEELYDGEQQQYIVPGSYPQPAQYPQSSYPEPHLAQPEFTPVQEEMEAIEVRSPG
ISRFRRQISKRSVNTPIRKRAIKKNT
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttgtcgatacaagatacacagctggttcctcttggcttttttggcagtacat
ctcatcagtcatgttcagggtcaagtggctccaccaacaagactaaggtataatctagtc
actcatgacagtgtacagatttcatggaaagcccctaaagggaaatttactggatttaag
cttcttgtcactccaagttcaggtggaaaaaccaatcaactaactcttcaaaacagtgca
accaaagcaattattcaaggtcttattccagatcaaagctatgcagttcagattattgca
tccaataaagaccaagagagcaagccagcacaagggcagttcagaattaaagatctagaa
agaaagaaggaaacatcaagtaaatccaaggtcaagggtacagaaggtcaagggtacggg
agtaaaccatctccatctacagaagaaagtcagtttacatgtaaaactccagcaattgca
gacattgtgatcctgatagatggctcatggagtattggcagatacaacttcagacttgtc
cggcttttcctggaaaatctggttggtgccttcaatgtgggttctgagaaaacaagaata
ggtcttgctcagtacagtggggatccccgaattgaatggcatctgaatgcctttagcaca
aaggatgctgttttggatgcagtccgtaatctgccatataagggagggaatacattaaca
ggtcttgccttaacttttattttggagaacagctttaagcctgaagcaggtgcaagaccc
aatgtgtccaaaattggtatattggtcacagatggaaaatcccaagatgatgtcatccca
cctgctaaaaatctgcgtgatgctggtgttgaattgtttgctattggtgtgaagaatgca
gatataaatgaactcaaagagattgcctctgaaccggacagtactcatgtctacaacgtt
gctgactttaacttcatgcacaccattgtagaaagtcttacgagaacagtgtgttcaaga
gtggaggaacaggaaaaggaaatcaaaggaacatttgttgccactcttggagctcctact
aatttggtcacatctgaggtaacagccagaggattccgtgttagctggacccatgcacct
ggcgaggtggaaaaatacagagttgtgtactatcccactagaggaggccaaccagaggag
gtagtggtggatggaagtgtatcaacagcagttctgaaaaacctgatgtctctaactgaa
tatcagatagctgtgtttgctatatatataagtgctgcaagtgagggcctccgtggtagt
gaaactacacttgctttgcctacagcatcaaatctgcaattgtatgatgtgtcacagagc
agcatgagagcaaagtggaatggagtagtgggtgccactggttatatgatcctatatgct
cccctcacagagggactggcagcagatgaaaaggagatgaaaattggagaggccttgaca
gatattgaactggatggattattgcctaacacagaatatacagtcacagtttatgcgatg
tttggagaagaagctagtgaccccctgacaggacaagaaacaacattgcctttaagtcca
cccaggaacttgagattttcagacatcggacacagcacttctaggataacatgggatcct
gcttccgaaaacgtaaatggttatcgtattatgtatgttaaaactgatgggacagaaacc
aatgaggtggaagctgatcgtgtttcaacatacaccctgaaaaggctgacatcccttaca
gaatatactgttgccattttttccctctatgatgaaggacagtctgagccgctgactggc
agctttactacaaaaaaagttccagccccacagtatgtggaaatagatgaagtatcaaca
gatagttttagagtcaattggaagcacatctcctctgatattgctcgctacagattggca
tggaccccactgaatgggggtgcatctgaagaggttgtcttagatggagacaaggacacg
catgttgttgagggtttgttatccgatacggagtatgaagtttctttgctggcagtttac
agtgatgaaagtgaaagtgatgttgttgctgttcttggaactacacttgcaaggaccact
acagtatctaccagcattgctactactagtccagcaacctccagacccacaacagcagtt
tttcgaacaggaatccgaaaccttgttatagatgatgaaaccacatcaagcttgagagtg
acatgggatgtttcagacaacaacattcaccagttcagagtgacctacctcattagtaaa
ggtgatcgtgctgaggaagtggtaatggtacctggaagacaaaacaatcttcttcttcag
cagctgctctcagataccgtatacaaagttactgtcactcccatctattctgatggggaa
ggagtcggtgtctcagctcctggaaaaaccttgcctctttctgcccccagaaatttaagg
gtctcagatgagtggtacaaccgattacgtattagctgggatgcccctccatcaccaaca
atgggttacaggattgtctacaaacctatcaaaatccctggaccagcactggagaccttc
gtgggggatgatattaacaccattctcattcttaatctattcagtggaactgagtatagc
attaaagtatttgcttcatactcaacaggcttcagtgatgccctagcaggcacagccaaa
acattgtacttgggggtgacaaatctggatgcatatcaagtgcgcatgactagtatttgt
gcccagtggcagcttcacagacatgctactgcatacaggatagttatagaatctcttgtt
gatgggaagaagaaagaagtaacccttggtggagggacatctagacattgcttctttgag
ctcatgcctggcactgagtataaaatcagtgtctatgcccagcttcaggagatagaaggc
cctggtgtaagcatcatggaaactacattaccatttccaactcaaccaccgacttctcct
tcaacaatagctccaccacctacaatccctcctgcaaaagaagtttgcaaagctgccaaa
gctgacctagtgttcctagtggatgggtcatggagtattggagatgacaatttcaataaa
ataattggattcctgtatagcactgttggagctttggacagaattggtcctgatggaact
caggttgccatagctcagttcagtgatgatcccagaacagaatttaaactgaatgtgtac
aaaacgaaagagactcttcttgaagccattcagcacatagcgtacaaaggaggaaacacc
aaaacaggcaaagcaattaagcatgcacaggaggccttgttcaccactgattcaggcata
aggaggggtatccctaaagttttggtggtcattactgatggacgatcacaggatgatgtg
aacaaagtctccagagagatgcaactagatggtttcagcatttttgctattggtgtggcg
gatgcagattattcagaattagttaacattggcagcaagcctagtgaaagacatgtcttc
tttgtggatgattttgatgccttcaagaagattgaagatgagctgatcacttttgtctgt
gaaactgcatcagcaacctgcccattggtatataaggatggcaacagtttagcaggattt
aaaatgatggaaatgtttggtttggttgaaaaggagttttcgacagtagaaggagtatct
atggagcctggtacttttaatgcttatccgtgttacagactgcataaagatgccttggtt
tctcagcctaccaaatacttgcacccagaggggctgccttcagactacaccattactttt
ctattccgtatactccctgacacaccccaggagccatttgctctgtgggagattttaaat
gaaaaatatgagccacttgttggagttattttggacaatgatggtaaaactctgattttc
tttaattatgactacaaaggggattttcaaactgttacttttgaaggccctgaaataaag
aaaatattctacggaagtttccataagttacatgttgttatcagcaagactacagccaaa
attattgttgactgcaagcaagtgagtgagaagacaattaatgcagcagggaatattact
tctgatgggatagaagttctaggaagaatggtcagatcccgaggacaaagggacaactct
gcaccattccagttacagatgtttgacattgtttgtaccacctcctgggccaatagagac
aaatgctgcgaacttcctgccttgagagatgaggaaagttgcccatctcttcctcattct
tgctcctgttccgaatttagcaaaggaccactcggacctcccggaccaccgggtggtcca
ggtgtcagaggcccaaagggacatcatggtgatcaaggtccaaagggcctagatggacct
cgtggtgaagttggtgctccaggaccccaagggcatccaggaccccaagggccaagtgga
ctttctattcaagggcttccaggaacaccaggtgaaaaaggagagaagggtgatcgtggt
ctccctggccagcagggtgtcccaggagcatcaggaccaccaggacgggatggaactcaa
ggtcaaaggggtgcacctggcaaagatggacccacagggccccaaggtcctcctgggcca
gtgggaatacctggtgctcctggtgttccaggtgttacgggaaacactgggccacaaggt
ggtgttggacctcctggtgctcctggtgcaaagggggaaaggggtgagcggggtgacatt
cagtcccaggcaatggtgcgtgcggttgctcatcaggtgtgtgaacagctcatccaaggt
cacatggccagatataattcaattctgaaccagattccaagtcagtctgtctcagaacga
actatcccaggacctcctggcgagccaggtcgaccaggatctcctgggtcacagggagaa
caaggagcaccaggaagacctggatttccaggcaatcctggccagccaggaagaccagga
gaaagaggtttaccaggcgagaaaggagaaagaggcaacccaggtgttggaacacaaggg
cccagaggcccaccagggcctgcaggaccttctggtgaaagtcgaactggcagcccaggg
ccaccaggatctccaggccaacgaggcccagctggtcatacaggtgttcctggtccacag
ggtccttctggcccacctggttactgtgatccttcttcttgtgctgggtatgatgtggga
ggtggatacggtgatgcaactgatcaagacatccccgtagtgcaattgccacataactcc
taccaaatctatgacccagaggaactttatgatggtgagcaacagcagtatatagttcct
gggtcctacccccaaccagcccaatatccccagtcctcctatccagaacctcatcttgct
caaccagagtttactcctgttcaggaagagatggaagccattgaagtgagatctcctgga
attagtcgtttcagaaggcaaatatcaaaaagaagtgtgaacactccaatacgtaagagg
gcaattaaaaaaaacacttaa
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