Caretta caretta (Loggerhead turtle): 125633493
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Entry
125633493 CDS
T09292
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125633493 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125633493 (PNPT1)
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125633493 (PNPT1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
125633493 (PNPT1)
Messenger RNA biogenesis [BR:
ccay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
125633493 (PNPT1)
Transfer RNA biogenesis [BR:
ccay03016
]
Prokaryotic type
tRNA degradation factors
125633493 (PNPT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125633493
NCBI-ProteinID:
XP_048698794
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All DBs
Position
3:25256534..25333401
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AA seq
797 aa
AA seq
DB search
MAACTGCQVCCRAGLRKLAAASSFRPLLGTMRRWLGPGARLVQLAQARGLQGGARPYKVA
SVDVGSRKLEISSGKLARFADGCAVVQLGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAA
AAGRIPTNYLRRELGSTDKEILTSRVIDRSIRPLFPAGYYYDTQILCNLLAVDGVNDPDV
PAINGASAALALSDIPWNGPIGAVRVGMVDGEVVINPTRKEMSSSTLNLLVTGAPHSQIV
MLEAAAENMLQQDFCHAIKVGVKHTQQIIQCIQQLVKEQGAAKRTVQKLFSAPAEIVECA
KQLASDKVCAVFANFSHDKISRDEAVNKIRLETEEQLKEKFPEAESYEIMESFNVISKDI
FRSFILNEYRRCDGRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSVK
SDLITTAVSGIKDKNFMLHYEFPPYATNEIGKVTGVNRRELGHGALAEKALKPVIPQDFP
FTIRVTSEVLESNGSSSMASVCGGSLALMDAGVPISAAVAGVAVGLVTRCDPEKNGEIED
YRLLTDILGIEDYNGDMDFKMAGTNKGITALQADIKLPGIPLKIVMEAIQQATVAKREIL
QIMNKTIAKPRPNRKENGPVVETVQVPLSKRVRFVGPGGYNLKKLQAETGVTVSQLDEEM
FSVFAPTPNAMHEAREFINEICKDDQEHHLEFGAVYTATITEIRDIGVMVKLYPNMSPVL
LHNSQLDQRKIKHPSALGLDVGQEIQVKYFGRDPTDGRMRLSRKVLQSPATTVVKTLSDK
NSIVMGAAIPESSSSSC
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgcacggggtgccaggtctgctgccgcgctgggctcaggaagctggccgcg
gccagcagtttccgcccgctgctcggcaccatgaggcgttggctgggaccgggcgctcgg
ctggtacagctggcccaggcccgaggcttgcagggcggcgcccgaccctacaaggtggcg
tcggtggacgtggggagcagaaagttggaaatttcctctggaaaactggccagatttgct
gatggatgtgctgtagtgcagttaggtgatacatcagtgatggtcacagcagtcagtaaa
acaaagccttctccatcccagttcatgccattggtggttgactatcgccagaaagctgct
gcagcaggaaggattcccacaaactatcttagaagagaacttggttccactgataaagaa
attcttacaagcagagtaatagatcgatcaattaggccactcttcccagcaggctactat
tatgatacacagatcctttgtaatcttttagcagtagatggtgttaatgatcctgatgtc
ccggcaattaatggagcatctgcagcacttgcgttatcagatatcccatggaatggtccc
attggtgcagtaagggtaggaatggttgatggagaagttgttattaacccaactcgaaaa
gaaatgtcttctagtaccttgaacttattggtcactggagctcctcatagtcaaattgtc
atgttggaagcagcagccgagaatatgttgcagcaagacttctgccatgccatcaaagtg
ggggtgaagcatactcaacaaataattcagtgtatacagcaactggtaaaagaacaaggt
gctgccaagagaactgttcagaagttatttagtgctccagcagagattgttgaatgtgca
aagcagcttgcctctgacaaggtctgtgctgtatttgcaaattttagccatgacaaaatt
tctagagatgaagcagttaacaagataagacttgaaacagaagaacagttgaaagagaaa
tttccagaggctgagtcttatgaaattatggaatcctttaatgttatttcaaaggatatt
tttagaagctttattctgaatgaatacagaaggtgtgatggtagagacttgacttctctc
agaaatatcagttgtgaagtagatatgtttaaaacacttcatggatcagcattatttcag
agaggtcaaacacaggttctctgtacagttacatttgattcactagaatcaagtgtaaaa
tctgatcttatcacaacagctgtgagtggaataaaagataaaaactttatgctgcattat
gagtttcctccttatgcaactaatgagattggcaaagttactggtgtgaacagaagagaa
cttggacatggtgcacttgcagagaaagctttgaagccagttattcctcaagatttccct
ttcacaataagggttacttcagaagtcttggagtcaaatggatcttcttcaatggcttca
gtatgtggtggaagtttggcattaatggatgcaggagtcccaatatcagctgctgtggca
ggtgtagcagtaggattggttaccagatgtgatcctgagaaaaatggagaaattgaggat
tatcgtttgttgacagacatcctaggaattgaagattacaatggtgatatggacttcaaa
atggctggtacgaataaaggaataactgctttgcaggctgatataaaactaccagggata
ccactaaaaattgtaatggaagccatccaacaagccacagttgcaaagagagaaatcttg
caaattatgaacaaaacaattgcgaaacccagaccaaacagaaaagaaaatggaccagtt
gtagaaactgttcaggtacccctatcaaaaagagtgaggtttgttggcccaggtggctat
aacttaaaaaaacttcaagctgaaactggggtaacagtgagtcagctggatgaagagatg
ttttctgtgtttgccccaacgcctaatgctatgcatgaagcacgagagtttattaacgaa
atctgcaaagatgatcaggagcatcatttggaatttggagctgtttatacagccacaata
actgaaattagagatattggagtgatggtaaaactgtatccgaatatgtctccagtgcta
cttcataattcacaacttgatcaaagaaagattaaacatcctagtgccctgggattagat
gttggccaagaaattcaggtgaaatacttcggtcgtgatccgactgatggccgaatgagg
ctttcacgtaaagtacttcagtcaccagccacaactgtggttaaaactctaagtgacaaa
aacagtattgtaatgggagctgcaattccggagtcatctagctcatcctgttga
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